FFCP PHASE1:Hg19::chr11:62648357..62648381,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:62648357..62648381,+ to FFCP PHASE1:Hg19::chr11:62648357..62648381,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6520 | |EntrezGene=6520 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11026 | |HGNC=11026 | ||
|TSSclassifier=strong | |||
|UniProt=B4E2Z3,F5H0E2,F5GZR9 | |UniProt=B4E2Z3,F5H0E2,F5GZR9 | ||
|association_with_transcript=0bp_to_ENST00000422606,ENST00000539458,ENST00000541372_5end | |||
|cluster_id=chr11:62648357..62648381,+ | |||
|description=CAGE_peak_1_at_SLC3A2_5end | |||
|id=chr11:62648357..62648381,+ | |||
|ontology_enrichment_celltype=CL:0000063!2.57e-27!578;CL:0000548!2.28e-25!679;CL:0000004!2.28e-25!679;CL:0000255!2.28e-25!679;CL:0000012!3.40e-25!682;CL:0000066!6.72e-20!254;CL:0000003!1.71e-17!722;CL:0000860!1.68e-16!45;CL:0002057!2.77e-16!42;CL:0002009!3.30e-15!65;CL:0002194!3.38e-15!63;CL:0000576!3.38e-15!63;CL:0000040!3.38e-15!63;CL:0000559!3.38e-15!63;CL:0000839!1.16e-14!70;CL:0000557!5.87e-14!71;CL:0000144!6.22e-13!625;CL:0000766!8.76e-12!76;CL:0002076!3.43e-11!43;CL:0002371!3.09e-10!591;CL:0000223!1.13e-09!59 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.98e-16;33!CL:0002057;1.98e-16;33!CL:0000473;4.41e-14;39!CL:0000234;4.41e-14;39!CL:0002076;2.92e-09;42!CL:0000576;3.32e-09;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.58e-19,253;CL:0000473,6.08e-17,48;CL:0000234,6.08e-17,48;CL:0000860,2.77e-16,42;CL:0002057,2.77e-16,42;CL:0002194,4.67e-15,59;CL:0000576,4.67e-15,59;CL:0000040,4.67e-15,59;CL:0000559,4.67e-15,59;CL:0002009,4.70e-15,61;CL:0000839,1.81e-14,66;CL:0000557,9.57e-14,67;CL:0002076,7.57e-12,42;CL:0000766,1.60e-11,72;CL:0000223,3.76e-10,58 | |||
|ontology_enrichment_development_v019=CL:0002057;2.65e-12;42 | |||
|ontology_enrichment_disease=DOID:305!2.65e-08!106;DOID:0050687!1.99e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.65e-08,106;DOID:0050687,1.99e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0002371!5.17e-12!80;UBERON:0001474!1.36e-11!86;UBERON:0004765!2.52e-09!101;UBERON:0001434!2.52e-09!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.61e-12,76;UBERON:0001474,2.62e-11,82;UBERON:0004765,2.71e-10,90;UBERON:0001434,2.01e-08,100;UBERON:0002405,9.04e-07,93 | |||
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| ||
|short_description=p1@SLC3A2 | |||
}} | }} |
Latest revision as of 22:04, 18 September 2015
Short description: | p1@SLC3A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC3A2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000422606, ENST00000539458, ENST00000541372_5end |
EntrezGene: | SLC3A2 |
HGNC: | 11026 |
UniProt: | B4E2Z3F5H0E2F5GZR9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.58e-19 | 253 |
defensive cell | 6.08e-17 | 48 |
phagocyte | 6.08e-17 | 48 |
classical monocyte | 2.77e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.77e-16 | 42 |
monopoietic cell | 4.67e-15 | 59 |
monocyte | 4.67e-15 | 59 |
monoblast | 4.67e-15 | 59 |
promonocyte | 4.67e-15 | 59 |
macrophage dendritic cell progenitor | 4.70e-15 | 61 |
myeloid lineage restricted progenitor cell | 1.81e-14 | 66 |
granulocyte monocyte progenitor cell | 9.57e-14 | 67 |
endo-epithelial cell | 7.57e-12 | 42 |
myeloid leukocyte | 1.60e-11 | 72 |
endodermal cell | 3.76e-10 | 58 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.61e-12 | 76 |
bone element | 2.62e-11 | 82 |
skeletal element | 2.71e-10 | 90 |
skeletal system | 2.01e-08 | 100 |
immune system | 9.04e-07 | 93 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.65e-08 | 106 |
cell type cancer | 1.99e-07 | 143 |