FFCP PHASE1:Hg19::chr12:53070363..53070375,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:53070363..53070375,- to FFCP PHASE1:Hg19::chr12:53070363..53070375,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:53070363..53070375,- | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_at_chr12:53070363..53070375,- | |||
|id=chr12:53070363..53070375,- | |||
|ontology_enrichment_celltype=CL:0002274!5.26e-39!5;CL:0000457!5.26e-39!5;CL:0002191!5.26e-39!5;CL:0000097!5.26e-39!5;CL:0000831!5.26e-39!5;CL:0002028!5.26e-39!5;CL:0000163!1.18e-21!9;CL:0000764!1.27e-16!2;CL:0000765!1.27e-16!2;CL:0000050!1.27e-16!2;CL:0000038!1.27e-16!2;CL:0000558!1.27e-16!2;CL:0000547!1.27e-16!2;CL:0000549!1.27e-16!2;CL:0000550!1.27e-16!2;CL:0000552!1.27e-16!2 | |||
|ontology_enrichment_celltype_v019=CL:0000097;4.80e-33;5!CL:0000163;1.04e-18;9!CL:0000764;3.27e-10;2!CL:0000558;3.27e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,4.81e-33,5;CL:0002028,4.81e-33,5;CL:0000163,1.04e-18,9;CL:0000764,3.27e-10,2;CL:0000765,3.27e-10,2;CL:0000050,3.27e-10,2;CL:0000038,3.27e-10,2;CL:0000558,3.27e-10,2;CL:0000547,3.27e-10,2;CL:0000549,3.27e-10,2;CL:0000550,3.27e-10,2;CL:0000552,3.27e-10,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8552!7.85e-09!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.74e-25!15;UBERON:0000179!2.74e-25!15;UBERON:0000463!2.74e-25!15;UBERON:0002390!2.11e-16!102;UBERON:0003061!2.11e-16!102;UBERON:0002193!1.09e-14!112;UBERON:0007023!2.16e-12!115;UBERON:0003081!1.09e-10!216;UBERON:0002134!4.54e-09!1;UBERON:0005208!4.54e-09!1;UBERON:0005946!4.54e-09!1;UBERON:0005965!4.54e-09!1;UBERON:0002078!4.54e-09!1;UBERON:0000989!5.31e-09!1;UBERON:0008811!5.31e-09!1;UBERON:0006258!5.31e-09!1;UBERON:0005876!5.31e-09!1;UBERON:0004874!5.31e-09!1;UBERON:0007029!5.75e-09!1;UBERON:0001301!7.27e-09!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.59e-58;15!UBERON:0000179;2.59e-58;15!UBERON:0000463;2.59e-58;15!UBERON:0002390;4.38e-26;32!UBERON:0002193;6.24e-17;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.59e-58,15;UBERON:0000179,2.59e-58,15;UBERON:0000463,2.59e-58,15;UBERON:0002390,1.27e-17,98;UBERON:0003061,1.27e-17,98;UBERON:0002193,5.97e-16,108;UBERON:0007023,1.17e-09,114;UBERON:0003081,3.40e-08,203;UBERON:0004535,8.49e-08,109;UBERON:0001009,1.41e-07,112 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97065295158377,4.31437326664808,0.414656231081544,0.576479813667846,3.02981840223312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.877039506583738,1.5686127061494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.05958087385735,2.29391162142713,2.84823593587081,0,0,1.29694662238543,3.7802200606668,3.96562588147135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.7896618469388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97065295158377,4.31437326664808,0.414656231081544,0.576479813667846,3.02981840223312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.877039506583738,1.5686127061494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.05958087385735,2.29391162142713,2.84823593587081,0,0,1.29694662238543,3.7802200606668,3.96562588147135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.7896618469388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:53070363..53070375,- | |||
}} | }} |
Latest revision as of 09:39, 24 July 2015
Short description: | p@chr12:53070363..53070375, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:53070363..53070375, - |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 4.81e-33 | 5 |
basophil mast progenitor cell | 4.81e-33 | 5 |
endocrine cell | 1.04e-18 | 9 |
erythroid lineage cell | 3.27e-10 | 2 |
erythroblast | 3.27e-10 | 2 |
megakaryocyte-erythroid progenitor cell | 3.27e-10 | 2 |
erythroid progenitor cell | 3.27e-10 | 2 |
reticulocyte | 3.27e-10 | 2 |
proerythroblast | 3.27e-10 | 2 |
basophilic erythroblast | 3.27e-10 | 2 |
polychromatophilic erythroblast | 3.27e-10 | 2 |
orthochromatic erythroblast | 3.27e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 2.59e-58 | 15 |
haemolymphatic fluid | 2.59e-58 | 15 |
organism substance | 2.59e-58 | 15 |
hematopoietic system | 1.27e-17 | 98 |
blood island | 1.27e-17 | 98 |
hemolymphoid system | 5.97e-16 | 108 |
adult organism | 1.17e-09 | 114 |
lateral plate mesoderm | 3.40e-08 | 203 |
cardiovascular system | 8.49e-08 | 109 |
circulatory system | 1.41e-07 | 112 |