FFCP PHASE1:Hg19::chr12:91502347..91502368,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:91502347..91502368,- to FFCP PHASE1:Hg19::chr12:91502347..91502368,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4060 | |EntrezGene=4060 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6724 | |HGNC=6724 | ||
|TSSclassifier=strong | |||
|UniProt=P51884 | |UniProt=P51884 | ||
|association_with_transcript=387bp_to_AB590375,BT006707,CU675507,CU690252,DQ892554,DQ895765_5end | |||
|cluster_id=chr12:91502347..91502368,- | |||
|coexpression_cluster_id=C1371 | |||
|description=CAGE_peak_5_at_LUM_5end | |||
|id=chr12:91502347..91502368,- | |||
|ontology_enrichment_celltype=CL:0000055!8.58e-09!180;CL:0000153!2.36e-08!9;CL:0000447!2.36e-08!9;CL:0002620!2.55e-08!23;CL:0000057!2.89e-08!75;CL:0000499!1.10e-07!27;CL:0002334!1.94e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000153;1.08e-15;9!CL:0000447;1.08e-15;9!CL:0000499;5.64e-15;28!CL:0000138;5.13e-10;6!CL:0000327;9.38e-09;15!CL:0000135;1.38e-08;3!CL:0000388;1.38e-08;3!CL:0002504;1.98e-07;3!CL:1000279;1.98e-07;3!CL:1000280;1.98e-07;3!CL:0000214;1.98e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,1.01e-15,9;CL:0000447,1.01e-15,9;CL:0000499,3.83e-15,28;CL:0000058,4.61e-10,6;CL:0000138,4.61e-10,6;CL:0000327,9.04e-09,15;CL:0000135,1.40e-08,3;CL:0000388,1.40e-08,3;CL:0002504,9.82e-08,3;CL:1000279,9.82e-08,3;CL:1000280,9.82e-08,3;CL:0000214,2.09e-07,3;CL:0002622,5.75e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!6.90e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004457!2.00e-07!12;UBERON:0000042!2.00e-07!12;UBERON:0004458!7.80e-07!49 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.40e-11;9!UBERON:0000042;2.40e-11;9!UBERON:0007846;1.38e-08;3!UBERON:0000043;1.38e-08;3!UBERON:0007845;1.38e-08;3!UBERON:0006915;1.98e-07;3!UBERON:0007616;1.98e-07;3!UBERON:0002217;1.98e-07;3!UBERON:0002018;1.98e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.40e-08,3;UBERON:0000043,1.40e-08,3;UBERON:0007845,1.40e-08,3;UBERON:0004457,3.24e-08,12;UBERON:0000042,3.24e-08,12;UBERON:0006915,2.09e-07,3;UBERON:0007616,2.09e-07,3;UBERON:0002217,2.09e-07,3;UBERON:0002018,2.09e-07,3 | |||
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| ||
|short_description=p5@LUM | |||
}} | }} |
Latest revision as of 21:02, 15 September 2015
Short description: | p5@LUM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LUM_5end |
Coexpression cluster: | C1371_tenocyte_Chondrocyte_placenta_Fibroblast_skin_mesenchymal_chorionic |
Association with transcript: | 387bp_to_AB590375, BT006707, CU675507, CU690252, DQ892554, DQ895765_5end |
EntrezGene: | LUM |
HGNC: | 6724 |
UniProt: | P51884 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 1.01e-15 | 9 |
carbohydrate secreting cell | 1.01e-15 | 9 |
stromal cell | 3.83e-15 | 28 |
chondroblast | 4.61e-10 | 6 |
chondrocyte | 4.61e-10 | 6 |
extracellular matrix secreting cell | 9.04e-09 | 15 |
fibrocyte | 1.40e-08 | 3 |
tendon cell | 1.40e-08 | 3 |
enteric smooth muscle cell | 9.82e-08 | 3 |
smooth muscle cell of large intestine | 9.82e-08 | 3 |
smooth muscle cell of colon | 9.82e-08 | 3 |
synovial cell | 2.09e-07 | 3 |
prostate stromal cell | 5.75e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 1.40e-08 | 3 |
tendon | 1.40e-08 | 3 |
regular connective tissue | 1.40e-08 | 3 |
cavity lining | 3.24e-08 | 12 |
serous membrane | 3.24e-08 | 12 |
stratified squamous epithelium | 2.09e-07 | 3 |
layer of synovial tissue | 2.09e-07 | 3 |
synovial joint | 2.09e-07 | 3 |
synovial membrane of synovial joint | 2.09e-07 | 3 |