FFCP PHASE1:Hg19::chr14:94847425..94847444,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5265 | |EntrezGene=5265 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=8941 | |HGNC=8941 | ||
|TSSclassifier=strong | |||
|UniProt=P01009 | |UniProt=P01009 | ||
|association_with_transcript=-174bp_to_X02920_5end | |||
|cluster_id=chr14:94847425..94847444,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_23_at_SERPINA1_5end | |||
|id=chr14:94847425..94847444,- | |||
|ontology_enrichment_celltype=CL:0002057!5.86e-50!42;CL:0000860!7.05e-46!45;CL:0000766!3.25e-45!76;CL:0002194!4.87e-44!63;CL:0000576!4.87e-44!63;CL:0000040!4.87e-44!63;CL:0000559!4.87e-44!63;CL:0002009!2.63e-42!65;CL:0000839!2.07e-38!70;CL:0000557!1.07e-37!71;CL:0000763!1.24e-27!112;CL:0000049!1.24e-27!112;CL:0000738!4.71e-24!140;CL:0002087!2.36e-22!119;CL:0002393!7.60e-18!9;CL:0002397!7.60e-18!9;CL:0000037!8.20e-18!172;CL:0000566!8.20e-18!172;CL:0002031!1.21e-17!124;CL:0000988!4.68e-16!182;CL:0002032!1.81e-15!165;CL:0000837!1.81e-15!165;CL:0000181!1.97e-08!12;CL:0000417!1.97e-08!12;CL:0000668!1.97e-08!12;CL:0000414!1.97e-08!12;CL:0000412!1.97e-08!12;CL:0000182!1.97e-08!12;CL:0000775!3.05e-07!3;CL:0000875!4.41e-07!3;CL:0002396!4.41e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.44e-20;12!CL:0002393;2.54e-10;6!CL:0002397;2.54e-10;6!CL:0000775;4.37e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.42e-20,12;CL:0002393,6.02e-12,9;CL:0002397,6.02e-12,9;CL:0000775,4.58e-10,3;CL:0000473,1.53e-07,48;CL:0000234,1.53e-07,48;CL:0000766,2.76e-07,72;CL:0000860,8.88e-07,42;CL:0002057,8.88e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.02e-22;11!UBERON:0009497;1.21e-18;13!UBERON:0006242;7.85e-08;1!UBERON:0001041;9.06e-08;30!UBERON:0003104;2.48e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!4.36e-35!115;UBERON:0002390!2.33e-34!102;UBERON:0003061!2.33e-34!102;UBERON:0002371!4.44e-32!80;UBERON:0002193!5.13e-30!112;UBERON:0001474!5.44e-29!86;UBERON:0004765!3.00e-24!101;UBERON:0001434!3.00e-24!101;UBERON:0003081!3.38e-11!216;UBERON:0002204!7.70e-11!167;UBERON:0009497!6.76e-10!25;UBERON:0000015!6.76e-10!25;UBERON:0002423!6.76e-10!25;UBERON:0006235!6.76e-10!25;UBERON:0004161!6.76e-10!25;UBERON:0008835!1.13e-09!22;UBERON:0003894!1.13e-09!22;UBERON:0009854!3.91e-09!23;UBERON:0007499!3.44e-08!25;UBERON:0002107!3.83e-08!19;UBERON:0006925!3.83e-08!19;UBERON:0008836!3.83e-08!19;UBERON:0009856!8.97e-08!26;UBERON:0005057!9.11e-08!26;UBERON:0006947!8.76e-07!3;UBERON:0004054!8.76e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.63e-22;19!UBERON:0006925;1.63e-22;19!UBERON:0002423;4.23e-21;25!UBERON:0002365;7.15e-13;31!UBERON:0002330;7.15e-13;31!UBERON:0002368;2.27e-11;33!UBERON:0000949;6.20e-10;43!UBERON:0002171;7.85e-08;1!UBERON:0006518;7.85e-08;1!UBERON:0008949;7.85e-08;1!UBERON:0000101;7.85e-08;1!UBERON:0002167;7.85e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.61e-22,19;UBERON:0006925,1.61e-22,19;UBERON:0008836,1.61e-22,19;UBERON:0009497,4.14e-21,25;UBERON:0000015,4.14e-21,25;UBERON:0002423,4.14e-21,25;UBERON:0006235,4.14e-21,25;UBERON:0004161,4.14e-21,25;UBERON:0008835,2.72e-19,22;UBERON:0003894,2.72e-19,22;UBERON:0009854,2.11e-18,23;UBERON:0007499,7.76e-17,25;UBERON:0009856,3.82e-16,26;UBERON:0002365,2.38e-13,31;UBERON:0002330,2.38e-13,31;UBERON:0002368,1.09e-11,35;UBERON:0000949,4.23e-11,45;UBERON:0003929,4.72e-11,54;UBERON:0005172,5.48e-09,54;UBERON:0005173,5.48e-09,54;UBERON:0005911,3.78e-08,82;UBERON:0002171,5.40e-08,1;UBERON:0006518,5.40e-08,1;UBERON:0008949,5.40e-08,1;UBERON:0000101,5.40e-08,1;UBERON:0002167,5.40e-08,1;UBERON:0002417,6.06e-08,60;UBERON:0000916,6.06e-08,60 | |||
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| ||
|short_description=p23@SERPINA1 | |||
}} | }} |
Latest revision as of 17:58, 16 September 2015
Short description: | p23@SERPINA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_SERPINA1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -174bp_to_X02920_5end |
EntrezGene: | SERPINA1 |
HGNC: | 8941 |
UniProt: | P01009 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.42e-20 | 12 |
intermediate monocyte | 6.02e-12 | 9 |
CD14-positive, CD16-positive monocyte | 6.02e-12 | 9 |
neutrophil | 4.58e-10 | 3 |
defensive cell | 1.53e-07 | 48 |
phagocyte | 1.53e-07 | 48 |
myeloid leukocyte | 2.76e-07 | 72 |
classical monocyte | 8.88e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.88e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
liver | 1.61e-22 | 19 |
digestive gland | 1.61e-22 | 19 |
liver bud | 1.61e-22 | 19 |
epithelium of foregut-midgut junction | 4.14e-21 | 25 |
anatomical boundary | 4.14e-21 | 25 |
hepatobiliary system | 4.14e-21 | 25 |
foregut-midgut junction | 4.14e-21 | 25 |
septum transversum | 4.14e-21 | 25 |
hepatic diverticulum | 2.72e-19 | 22 |
liver primordium | 2.72e-19 | 22 |
digestive tract diverticulum | 2.11e-18 | 23 |
epithelial sac | 7.76e-17 | 25 |
sac | 3.82e-16 | 26 |
exocrine gland | 2.38e-13 | 31 |
exocrine system | 2.38e-13 | 31 |
endocrine gland | 1.09e-11 | 35 |
endocrine system | 4.23e-11 | 45 |
gut epithelium | 4.72e-11 | 54 |
abdomen element | 5.48e-09 | 54 |
abdominal segment element | 5.48e-09 | 54 |
endo-epithelium | 3.78e-08 | 82 |
lower lobe of right lung | 5.40e-08 | 1 |
right lung lobe | 5.40e-08 | 1 |
lower lobe of lung | 5.40e-08 | 1 |
lobe of lung | 5.40e-08 | 1 |
right lung | 5.40e-08 | 1 |
abdominal segment of trunk | 6.06e-08 | 60 |
abdomen | 6.06e-08 | 60 |