FFCP PHASE1:Hg19::chr15:75639348..75639359,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:75639348..75639359,+ to FFCP PHASE1:Hg19::chr15:75639348..75639359,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79661 | |EntrezGene=79661 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18448 | |HGNC=18448 | ||
|TSSclassifier=strong | |||
|UniProt=Q96FI4 | |UniProt=Q96FI4 | ||
|association_with_transcript=17bp_to_ENST00000355059,NM_024608,uc002bad.2_5end | |||
|cluster_id=chr15:75639348..75639359,+ | |||
|description=CAGE_peak_6_at_NEIL1_5end | |||
|id=chr15:75639348..75639359,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002591;7.43e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,9.97e-11,1 | |||
|ontology_enrichment_development_v019=UBERON:0007297;5.91e-20;2!UBERON:0000358;2.65e-11;1!UBERON:0006298;7.43e-11;1!UBERON:0008801;7.43e-11;1!UBERON:0005754;7.43e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;7.43e-11;1!DOID:10165;7.43e-11;1!DOID:1798;7.43e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,1.61e-10,1;DOID:10165,1.61e-10,1;DOID:1798,1.61e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.20e-31!115;UBERON:0001049!1.06e-25!57;UBERON:0005068!1.06e-25!57;UBERON:0006241!1.06e-25!57;UBERON:0007135!1.06e-25!57;UBERON:0002616!6.07e-21!59;UBERON:0003075!1.17e-19!86;UBERON:0007284!1.17e-19!86;UBERON:0003080!5.33e-19!42;UBERON:0002346!6.02e-19!90;UBERON:0005743!2.26e-18!86;UBERON:0002780!5.84e-18!41;UBERON:0001890!5.84e-18!41;UBERON:0006240!5.84e-18!41;UBERON:0001017!8.47e-18!82;UBERON:0000955!1.28e-17!69;UBERON:0006238!1.28e-17!69;UBERON:0000073!7.79e-17!94;UBERON:0001016!7.79e-17!94;UBERON:0001893!2.30e-16!34;UBERON:0002020!3.24e-16!34;UBERON:0003528!3.24e-16!34;UBERON:0002791!1.27e-15!33;UBERON:0001869!1.05e-14!32;UBERON:0000033!9.59e-14!123;UBERON:0003056!1.46e-13!61;UBERON:0000153!1.57e-13!129;UBERON:0007811!1.57e-13!129;UBERON:0002619!2.14e-13!22;UBERON:0001950!3.47e-13!20;UBERON:0004121!3.62e-12!169;UBERON:0000924!5.58e-12!173;UBERON:0006601!5.58e-12!173;UBERON:0000956!3.72e-11!25;UBERON:0000203!3.72e-11!25;UBERON:0004111!1.02e-10!241;UBERON:0000025!2.86e-09!194;UBERON:0000477!5.32e-09!286;UBERON:0002298!1.06e-08!8;UBERON:0000062!2.06e-08!511;UBERON:0003076!7.04e-08!15;UBERON:0003057!7.04e-08!15;UBERON:0000064!3.97e-07!219;UBERON:0001872!8.13e-07!5;UBERON:0000922!8.72e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;5.91e-20;2!UBERON:0001044;7.72e-15;6!UBERON:0003293;7.72e-15;6!UBERON:0003294;7.72e-15;6!UBERON:0010047;7.72e-15;6!UBERON:0003408;7.72e-15;6!UBERON:0000167;7.72e-15;6!UBERON:0006947;1.23e-13;3!UBERON:0004054;1.23e-13;3!UBERON:0001831;7.43e-11;1!UBERON:0000998;7.43e-11;1!UBERON:0001736;7.43e-11;1!UBERON:0001301;7.43e-11;1!UBERON:0006868;7.43e-11;1!UBERON:0001567;7.43e-11;1!UBERON:0005904;1.86e-10;4!UBERON:0004921;4.53e-09;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,4.04e-20,2;UBERON:0001044,5.30e-15,6;UBERON:0003293,5.30e-15,6;UBERON:0003294,5.30e-15,6;UBERON:0010047,5.30e-15,6;UBERON:0000167,5.30e-15,6;UBERON:0006947,1.60e-13,3;UBERON:0004054,1.60e-13,3;UBERON:0001736,3.08e-11,1;UBERON:0006298,3.08e-11,1;UBERON:0000998,5.57e-11,1;UBERON:0006868,5.57e-11,1;UBERON:0001831,1.21e-10,1;UBERON:0001567,1.21e-10,1;UBERON:0008801,1.21e-10,1;UBERON:0001301,1.46e-10,1;UBERON:0005904,2.25e-10,4;UBERON:0007023,3.63e-10,114;UBERON:0003408,3.22e-09,10;UBERON:0002553,7.44e-07,61 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,1.0007329835313,0,0,0,0,0,0,0.697801167972428,0,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0.689491361473237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0.112328631146495,0.450530678524519,0,0,0,0.182664153764634,0,0,0,0.853460445133014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.327447688744282,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0,0,0.488124115096339,0,0,0.17859945656816,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0.161872944368132,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0.193260853163297,0,0.286804595389004,0.121973706129595,0.132529768321485,0.348581828608555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0.144366447761074,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0.432359860250884,0.25248486685276,0,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0.206768026122887,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0.512900250232778,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382838137483752,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.71623345421307,0.296964680832639,0.307160702099232,0,0.703347082052564,0,0,0,0,0.552567831062295,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.463840490809256,0,0,0.437299999980979,1.44999915086959,0,0,0,0,0,0,0,0.361789315876224,0,0.774054819518572,0.886642856860642,0,0,0,0.0769502585037971,0,0.69169171316418,1.25660702173681,0.217294743844016,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,1.41532103205343,1.22206028986725,0,0,0,0.539209063845416,0,0,0,0.19566461893209,0,0.394584402849391,0,0.30607276163049,0.126373159256976,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0.193978032976839,0.0882561266915003,0,0,0,0.50648636764703,0,0,0.426905989478705,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0.236349546921671,0.0824158583811665,0.0674035438541849,0.0984274815147488,0,0,1.22583065500418,0,0.825236619583403,0,0.2249738915515,2.32140586367385,0.485996453264197,0,0.236417121897595,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0.258565912723101,0.39669780522807,0,0,0.213574825135389,0.943225830597996,0.414239055347196,0,0,0.121792598380896,0,0,0.7520696820681,0.306345576763462,0,0.628216385000937,0,0.366078794705889,0.1251909307065,1.72022758707021,0.443716206147409,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,0.389720617678777,0.132864840313363,0.163565394255844,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642292250964595,0,0.638535436228605,0.615349092722265,0.756215088665154,0.414943514785307,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0.781514011233092,1.04762677792569,0,0.295712172434091,0.337687923091973,0.781078098613847,0.620060389503552,0.507326481551255,1.09394961803644,1.09651553371436,0,0.175871244359621,0,0,0.672567444437648,1.21393120847326,0.682986574053893,0.177404740325278,0,0,0.40781839786099,0.591954962065642,0,0.111231401892069,0.078493092850514,0.157115589916002,0,0.913158720509496,0,0,0.428859265059938,0.158013611732727,0.116241425368125,0,0,0,0,0.691259661814092,1.29068207646083,0.236664001461131,0.170426809518315,1.27016115057279,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0.237840181555137,0,0,0,1.54348316215889,0.218559560503957,0,0,0,0.588925401344836,0.594092800654172,0.8453114551668,0,0,0.257831551894309,0,0,0,0,0.730336388246517,1.83491713361816,0.430018749454354,0,0.475940431336403,0.872701380680755,0,0,0.462175628631418,0,0.126166424835079,0.546327859818478,0,0.203977659483963,0,0.275684698604535,0.250707539292375,0,0.267964130156178,0,0.517164979309476,0,0,0.193766729508018,0.0620747142958579,0.112131862580613,0.12729431655633,0.808468755832877,0,0.342233301085281,0.0673520530145875,0.430333232356058,0.665320713092027,0,0,0,0,2.34640942403454,0.244482888365733,0,0,0.201273793591026,0 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| ||
|short_description=p6@NEIL1 | |||
}} | }} |
Latest revision as of 03:34, 19 September 2015
Short description: | p6@NEIL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_NEIL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 17bp_to_ENST00000355059, NM_024608, uc002bad.2_5end |
EntrezGene: | NEIL1 |
HGNC: | 18448 |
UniProt: | Q96FI4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 9.97e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 4.04e-20 | 2 |
saliva-secreting gland | 5.30e-15 | 6 |
gland of oral region | 5.30e-15 | 6 |
gland of foregut | 5.30e-15 | 6 |
oral gland | 5.30e-15 | 6 |
oral cavity | 5.30e-15 | 6 |
male genital duct | 1.60e-13 | 3 |
internal male genitalia | 1.60e-13 | 3 |
submandibular gland | 3.08e-11 | 1 |
submandibular gland primordium | 3.08e-11 | 1 |
seminal vesicle | 5.57e-11 | 1 |
seminal fluid secreting gland | 5.57e-11 | 1 |
parotid gland | 1.21e-10 | 1 |
cheek | 1.21e-10 | 1 |
parotid gland primordium | 1.21e-10 | 1 |
epididymis | 1.46e-10 | 1 |
duct of male reproductive system | 2.25e-10 | 4 |
adult organism | 3.63e-10 | 114 |
gland of gut | 3.22e-09 | 10 |
anatomical cavity | 7.44e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.61e-10 | 1 |
endocrine pancreas cancer | 1.61e-10 | 1 |
pancreatic endocrine carcinoma | 1.61e-10 | 1 |