FFCP PHASE1:Hg19::chr16:89753869..89753899,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:89753869..89753899,+ to FFCP PHASE1:Hg19::chr16:89753869..89753899,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8558 | |EntrezGene=8558 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1770 | |HGNC=1770 | ||
|TSSclassifier=strong | |||
|UniProt=Q15131 | |UniProt=Q15131 | ||
|association_with_transcript=-216bp_to_X78342_5end | |||
|cluster_id=chr16:89753869..89753899,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_6_at_CDK10_5end | |||
|id=chr16:89753869..89753899,+ | |||
|ontology_enrichment_celltype=CL:0000181!8.34e-13!12;CL:0000417!8.34e-13!12;CL:0000668!8.34e-13!12;CL:0000414!8.34e-13!12;CL:0000412!8.34e-13!12;CL:0000182!8.34e-13!12;CL:0000623!7.35e-08!3;CL:0000825!7.35e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.49e-42;12!CL:0002253;2.15e-08;2!CL:0002535;2.15e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.41e-42,12;CL:0000223,1.62e-11,58;CL:0002535,1.86e-08,2;CL:0002253,2.87e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;8.13e-21;11!UBERON:0009497;1.13e-17;13!UBERON:0003104;2.21e-11;31!CL:0000223;3.97e-08;58!UBERON:0001041;8.13e-08;30 | |||
|ontology_enrichment_disease=DOID:305!6.61e-11!106;DOID:0050687!1.02e-10!143;DOID:14566!2.77e-07!239;DOID:162!4.06e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009497!6.71e-12!25;UBERON:0000015!6.71e-12!25;UBERON:0002423!6.71e-12!25;UBERON:0006235!6.71e-12!25;UBERON:0004161!6.71e-12!25;UBERON:0003929!3.56e-10!54;UBERON:0008835!7.72e-10!22;UBERON:0003894!7.72e-10!22;UBERON:0002107!1.57e-09!19;UBERON:0006925!1.57e-09!19;UBERON:0008836!1.57e-09!19;UBERON:0009854!2.61e-09!23;UBERON:0007499!2.21e-08!25;UBERON:0009856!5.67e-08!26;UBERON:0005911!7.56e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.28e-36;19!UBERON:0006925;4.28e-36;19!UBERON:0002423;2.34e-27;25!UBERON:0002365;9.76e-23;31!UBERON:0002330;9.76e-23;31!UBERON:0002368;8.00e-18;33!UBERON:0000949;8.14e-15;43!UBERON:0005172;3.01e-09;52!UBERON:0005173;3.01e-09;52!UBERON:0006955;2.15e-08;2!UBERON:0004801;2.15e-08;2!UBERON:0002417;3.50e-08;58!UBERON:0000916;3.50e-08;58!UBERON:0002530;5.72e-08;57!UBERON:0001007;9.44e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.41e-36,19;UBERON:0006925,4.41e-36,19;UBERON:0008836,4.41e-36,19;UBERON:0008835,4.03e-31,22;UBERON:0003894,4.03e-31,22;UBERON:0009854,9.39e-30,23;UBERON:0007499,2.40e-27,25;UBERON:0009497,2.40e-27,25;UBERON:0000015,2.40e-27,25;UBERON:0002423,2.40e-27,25;UBERON:0006235,2.40e-27,25;UBERON:0004161,2.40e-27,25;UBERON:0009856,2.78e-26,26;UBERON:0002365,5.53e-22,31;UBERON:0002330,5.53e-22,31;UBERON:0002368,2.00e-19,35;UBERON:0003929,4.06e-16,54;UBERON:0000949,5.18e-15,45;UBERON:0005172,1.97e-12,54;UBERON:0005173,1.97e-12,54;UBERON:0002530,2.46e-11,59;UBERON:0002417,3.87e-11,60;UBERON:0000916,3.87e-11,60;UBERON:0005911,2.24e-10,82;UBERON:0006955,1.86e-08,2;UBERON:0004801,1.86e-08,2;UBERON:0001041,1.63e-07,87;UBERON:0003914,4.86e-07,117;UBERON:0004921,6.52e-07,118 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0,0,5.07020139287323,2.94848165003288,1.77236972004421,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0.197030760201927,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0.966875596732978,0,0,0,0.182091168006717,0,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64865618636356,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,2.63602642174982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,1.51159648712566,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0.23056390438806,0,0,0,0,0,0,0,0.166211681900156,0.225595660617181,0.19606253431774,0,0.189753732724185,0,0,0,1.13082457147153,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,1.20990716048664,0,0,0,0,0,0,0.313932918407225,0,0,0.138674673013139,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0.0801588202515337,0,0,0,0,1.54435498075768,0,0,0,0,0,0.101998217636322,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,1.18174773460835,0.494495150286999,1.14586024552114,0.0984274815147488,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,1.17241786942466,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0.176689145945881,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9555033757741,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0.111855431797792,0.196300467230486,0.121917924982269,0,0,0,0,0,0.596852325484105,0,0,0,0.301925687133347,0.463044948647668,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0.0679914901909147,0,0,0,0,0,0,0.109265571963696,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0.202117188958219,0,0,0,0,0,0,0,0,0.359300808426348,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0,0,5.07020139287323,2.94848165003288,1.77236972004421,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0.197030760201927,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0.966875596732978,0,0,0,0.182091168006717,0,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64865618636356,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,2.63602642174982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,1.51159648712566,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0.23056390438806,0,0,0,0,0,0,0,0.166211681900156,0.225595660617181,0.19606253431774,0,0.189753732724185,0,0,0,1.13082457147153,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,1.20990716048664,0,0,0,0,0,0,0.313932918407225,0,0,0.138674673013139,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0.0801588202515337,0,0,0,0,1.54435498075768,0,0,0,0,0,0.101998217636322,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,1.18174773460835,0.494495150286999,1.14586024552114,0.0984274815147488,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,1.17241786942466,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0.176689145945881,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9555033757741,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0.111855431797792,0.196300467230486,0.121917924982269,0,0,0,0,0,0.596852325484105,0,0,0,0.301925687133347,0.463044948647668,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0.0679914901909147,0,0,0,0,0,0,0.109265571963696,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0.202117188958219,0,0,0,0,0,0,0,0,0.359300808426348,0,0,0,0,0,0 | ||
|short_description=p6@CDK10 | |||
}} | }} |
Latest revision as of 12:16, 18 September 2015
Short description: | p6@CDK10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CDK10_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -216bp_to_X78342_5end |
EntrezGene: | CDK10 |
HGNC: | 1770 |
UniProt: | Q15131 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.41e-42 | 12 |
endodermal cell | 1.62e-11 | 58 |
epithelial cell of cervix | 1.86e-08 | 2 |
epithelial cell of large intestine | 2.87e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
liver | 4.41e-36 | 19 |
digestive gland | 4.41e-36 | 19 |
liver bud | 4.41e-36 | 19 |
hepatic diverticulum | 4.03e-31 | 22 |
liver primordium | 4.03e-31 | 22 |
digestive tract diverticulum | 9.39e-30 | 23 |
epithelial sac | 2.40e-27 | 25 |
epithelium of foregut-midgut junction | 2.40e-27 | 25 |
anatomical boundary | 2.40e-27 | 25 |
hepatobiliary system | 2.40e-27 | 25 |
foregut-midgut junction | 2.40e-27 | 25 |
septum transversum | 2.40e-27 | 25 |
sac | 2.78e-26 | 26 |
exocrine gland | 5.53e-22 | 31 |
exocrine system | 5.53e-22 | 31 |
endocrine gland | 2.00e-19 | 35 |
gut epithelium | 4.06e-16 | 54 |
endocrine system | 5.18e-15 | 45 |
abdomen element | 1.97e-12 | 54 |
abdominal segment element | 1.97e-12 | 54 |
gland | 2.46e-11 | 59 |
abdominal segment of trunk | 3.87e-11 | 60 |
abdomen | 3.87e-11 | 60 |
endo-epithelium | 2.24e-10 | 82 |
uterine epithelium | 1.86e-08 | 2 |
cervix epithelium | 1.86e-08 | 2 |
foregut | 1.63e-07 | 87 |
epithelial tube | 4.86e-07 | 117 |
subdivision of digestive tract | 6.52e-07 | 118 |