FFCP PHASE1:Hg19::chr17:39093082..39093091,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:39093082..39093091,- to FFCP PHASE1:Hg19::chr17:39093082..39093091,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25984 | |EntrezGene=25984 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6438 | |HGNC=6438 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=113bp_to_uc010cxg.2_5end | |||
|cluster_id=chr17:39093082..39093091,- | |||
|coexpression_cluster_id=C524 | |||
|description=CAGE_peak_4_at_KRT23_5end | |||
|id=chr17:39093082..39093091,- | |||
|ontology_enrichment_celltype=CL:0002537!6.02e-09!5;CL:0002541!8.30e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002537;1.91e-23;5!CL:0000349;6.67e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,2.02e-23,5;CL:0000349,6.77e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0008801;9.99e-30;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;1.78e-29;1!DOID:1357;1.78e-29;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,1.33e-29,1;DOID:1357,1.33e-29,1 | |||
|ontology_enrichment_uberon=UBERON:0001044!8.90e-13!6;UBERON:0003293!8.90e-13!6;UBERON:0003294!8.90e-13!6;UBERON:0010047!8.90e-13!6;UBERON:0000167!8.90e-13!6;UBERON:0001829!1.40e-10!2;UBERON:0003127!5.75e-10!2;UBERON:0000466!2.23e-08!126;UBERON:0002365!3.43e-08!31;UBERON:0002330!3.43e-08!31;UBERON:0005631!6.49e-08!14;UBERON:0000158!6.49e-08!14;UBERON:0003408!1.13e-07!10;UBERON:0000002!5.05e-07!6;UBERON:0001560!5.05e-07!6;UBERON:0002530!5.82e-07!59;UBERON:0000476!8.30e-07!3;UBERON:0000920!8.30e-07!3;UBERON:0000161!8.41e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0001831;9.99e-30;1!UBERON:0001567;9.99e-30;1!UBERON:0001764;1.78e-29;1!UBERON:0001825;1.78e-29;1!UBERON:0001000;3.64e-29;1!UBERON:0005352;3.64e-29;1!UBERON:0001044;6.48e-20;6!UBERON:0003293;6.48e-20;6!UBERON:0003294;6.48e-20;6!UBERON:0010047;6.48e-20;6!UBERON:0003408;6.48e-20;6!UBERON:0000167;6.48e-20;6!UBERON:0000305;4.54e-17;7!UBERON:0001829;1.33e-15;2!UBERON:0004089;1.33e-15;2!UBERON:0005631;2.90e-12;10!UBERON:0000158;2.90e-12;10!UBERON:0006947;1.14e-10;3!UBERON:0004054;1.14e-10;3!UBERON:0001041;4.04e-09;14!UBERON:0005904;2.52e-08;4!UBERON:0000161;5.83e-07;19!UBERON:0000166;5.83e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001831,9.99e-30,1;UBERON:0001567,9.99e-30,1;UBERON:0008801,9.99e-30,1;UBERON:0001764,1.33e-29,1;UBERON:0001825,1.33e-29,1;UBERON:0001000,3.16e-29,1;UBERON:0005352,3.16e-29,1;UBERON:0001044,7.13e-20,6;UBERON:0003293,7.13e-20,6;UBERON:0003294,7.13e-20,6;UBERON:0010047,7.13e-20,6;UBERON:0000167,7.13e-20,6;UBERON:0000305,4.73e-17,7;UBERON:0001829,1.33e-15,2;UBERON:0004089,1.33e-15,2;UBERON:0004871,4.69e-15,8;UBERON:0003408,2.37e-12,10;UBERON:0006947,1.09e-10,3;UBERON:0004054,1.09e-10,3;UBERON:0005631,4.95e-09,14;UBERON:0000158,4.95e-09,14;UBERON:0005904,2.43e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0.451199612907412,0.231046011313244,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,2.67268212749375,1.22864280839693,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0.230850775511391,0,0,0,0,0.957003479195758,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97292201424695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315132729228895,0.659326867049332,0.471824806979294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5085370753095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82697373250422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.591424344868181,0,0,0,0,0,3.83780436800028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0.3414369541879,0,2.58136415292167,0,0,0,7.7896335304977,0,0,0.111855431797792,0.785201868921944,0,0,0,0,0,0,0,0,0.5647304101948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0.0673520530145875,0.358611026963382,0.332660356546013,0.0814032686109745,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0.451199612907412,0.231046011313244,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,2.67268212749375,1.22864280839693,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0.230850775511391,0,0,0,0,0.957003479195758,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97292201424695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315132729228895,0.659326867049332,0.471824806979294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5085370753095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82697373250422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.591424344868181,0,0,0,0,0,3.83780436800028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0.3414369541879,0,2.58136415292167,0,0,0,7.7896335304977,0,0,0.111855431797792,0.785201868921944,0,0,0,0,0,0,0,0,0.5647304101948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0.0673520530145875,0.358611026963382,0.332660356546013,0.0814032686109745,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p4@KRT23 | |||
}} | }} |
Latest revision as of 04:07, 20 September 2015
Short description: | p4@KRT23 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_KRT23_5end |
Coexpression cluster: | C524_serous_endometrioid_endometrial_mesothelioma_gall_clear_papillotubular |
Association with transcript: | 113bp_to_uc010cxg.2_5end |
EntrezGene: | KRT23 |
HGNC: | 6438 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 2.02e-23 | 5 |
extraembryonic cell | 6.77e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
parotid gland | 9.99e-30 | 1 |
cheek | 9.99e-30 | 1 |
parotid gland primordium | 9.99e-30 | 1 |
maxillary sinus | 1.33e-29 | 1 |
paranasal sinus | 1.33e-29 | 1 |
vas deferens | 3.16e-29 | 1 |
spermatic cord | 3.16e-29 | 1 |
saliva-secreting gland | 7.13e-20 | 6 |
gland of oral region | 7.13e-20 | 6 |
gland of foregut | 7.13e-20 | 6 |
oral gland | 7.13e-20 | 6 |
oral cavity | 7.13e-20 | 6 |
amnion | 4.73e-17 | 7 |
major salivary gland | 1.33e-15 | 2 |
midface | 1.33e-15 | 2 |
somatic layer of lateral plate mesoderm | 4.69e-15 | 8 |
gland of gut | 2.37e-12 | 10 |
male genital duct | 1.09e-10 | 3 |
internal male genitalia | 1.09e-10 | 3 |
extraembryonic membrane | 4.95e-09 | 14 |
membranous layer | 4.95e-09 | 14 |
duct of male reproductive system | 2.43e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 1.33e-29 | 1 |
maxillary sinus cancer | 1.33e-29 | 1 |