FFCP PHASE1:Hg19::chr17:75123947..75123964,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:75123947..75123964,+ to FFCP PHASE1:Hg19::chr17:75123947..75123964,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:75123947..75123964,+ | |||
|description=CAGE_peak_at_chr17:75123947..75123964,+ | |||
|id=chr17:75123947..75123964,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.00e-20!42;CL:0000860!5.22e-18!45;CL:0000766!1.53e-13!76;CL:0002139!5.15e-13!24;CL:0000115!8.19e-13!35;CL:0002078!4.57e-11!44;CL:0002194!1.03e-09!63;CL:0000576!1.03e-09!63;CL:0000040!1.03e-09!63;CL:0000559!1.03e-09!63;CL:0002009!4.43e-09!65;CL:1000413!9.63e-09!9;CL:0000839!1.02e-08!70;CL:0000557!1.92e-08!71;CL:0000071!3.08e-08!18;CL:0002546!3.08e-08!18;CL:0000738!3.53e-08!140;CL:0000094!1.11e-07!8;CL:0002393!3.85e-07!9;CL:0002397!3.85e-07!9;CL:0005020!8.24e-07!6;CL:0002138!8.24e-07!6;CL:0005022!8.24e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000115;7.05e-18;36!CL:0002139;6.26e-15;24!CL:0002078;2.73e-09;45!CL:0002138;3.14e-09;6!CL:1000413;6.74e-09;9!CL:0000071;1.95e-08;18!CL:0000775;4.71e-08;3!CL:0002188;5.75e-08;5!CL:0000094;1.55e-07;8!CL:0002618;8.87e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,7.04e-20,36;CL:0002078,2.44e-16,45;CL:0002139,3.52e-15,24;CL:0000213,3.67e-10,58;CL:0000215,3.67e-10,58;CL:0005020,1.84e-09,6;CL:0002138,1.84e-09,6;CL:0005022,1.84e-09,6;CL:1000413,6.79e-09,9;CL:0000071,1.63e-08,18;CL:0002546,1.63e-08,18;CL:0000775,4.74e-08,3;CL:0002188,5.79e-08,5;CL:0000094,1.56e-07,8;CL:0002618,5.92e-07,3 | |||
|ontology_enrichment_development_v019=CL:0005022;3.14e-09;6!CL:0002546;1.95e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.19e-26!115;UBERON:0002193!2.05e-15!112;UBERON:0003081!3.49e-14!216;UBERON:0002390!9.90e-13!102;UBERON:0003061!9.90e-13!102;UBERON:0001009!9.14e-11!113;UBERON:0002405!2.58e-10!115;UBERON:0004535!3.20e-09!110;UBERON:0003915!9.63e-09!9;UBERON:0004700!9.63e-09!9;UBERON:0001917!9.63e-09!9;UBERON:0001474!1.88e-08!86;UBERON:0001986!3.08e-08!18;UBERON:0004638!3.08e-08!18;UBERON:0004852!3.08e-08!18;UBERON:0000178!7.49e-08!15;UBERON:0000179!7.49e-08!15;UBERON:0000463!7.49e-08!15;UBERON:0002371!1.45e-07!80;UBERON:0003075!4.27e-07!86;UBERON:0007284!4.27e-07!86;UBERON:0001049!8.16e-07!57;UBERON:0005068!8.16e-07!57;UBERON:0006241!8.16e-07!57;UBERON:0007135!8.16e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.28e-12;15!UBERON:0000179;1.28e-12;15!UBERON:0000463;1.28e-12;15!UBERON:0003915;6.74e-09;9!UBERON:0004700;6.74e-09;9!UBERON:0001917;6.74e-09;9!UBERON:0004638;1.95e-08;18!UBERON:0001986;1.95e-08;18!UBERON:0004852;1.95e-08;18!UBERON:0002193;2.49e-08;42!UBERON:0003978;1.89e-07;3!UBERON:0000946;1.89e-07;3!UBERON:0007100;7.97e-07;25!UBERON:0001473;8.63e-07;8!UBERON:0004536;8.63e-07;8!UBERON:0006558;8.63e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001009,3.46e-16,112;UBERON:0004535,2.27e-13,109;UBERON:0003081,7.83e-13,203;UBERON:0000178,1.69e-12,15;UBERON:0000179,1.69e-12,15;UBERON:0000463,1.69e-12,15;UBERON:0002193,2.82e-10,108;UBERON:0003915,6.79e-09,9;UBERON:0004700,6.79e-09,9;UBERON:0001917,6.79e-09,9;UBERON:0007023,1.58e-08,114;UBERON:0004638,1.63e-08,18;UBERON:0001986,1.63e-08,18;UBERON:0004852,1.63e-08,18;UBERON:0002390,1.88e-07,98;UBERON:0003061,1.88e-07,98;UBERON:0003978,1.94e-07,3;UBERON:0009751,1.94e-07,3;UBERON:0000946,1.94e-07,3;UBERON:0002523,1.94e-07,3;UBERON:0005983,1.94e-07,3;UBERON:0002165,1.94e-07,3;UBERON:0002062,1.94e-07,3;UBERON:0007280,1.94e-07,3;UBERON:0001473,5.87e-07,8;UBERON:0004536,5.87e-07,8;UBERON:0006558,5.87e-07,8;UBERON:0000055,8.02e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0.251085279189606,0,0,0,0.393364276848904,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.601633342410425,0.651032612147555,0,0,0,1.89017710413434,1.88937971844405,2.91100873425379,0.464858073811369,0.411167888021826,1.54853185447552,0.28769239232215,0.256160706529101,1.18241114944293,0.344745680736619,0,1.35426486594342,0.752969358170419,0,0.898893937780338,1.22433556948361,0.320929027076094,1.27867425159808,0,1.79517291859469,1.70489900213078,0,0.56738522469114,0.622822248995575,0.251248665256743,1.0429658368404,0.868755378820466,0.605399502633369,0.368277635987565,1.26584954976354,2.11255286311942,0.425208599930087,0.838634582033504,0.22465726229299,0.150176892841506,0.32145117339416,1.14005097496499,0.59675003159727,2.37463399894024,0,0.546138611262131,0,0,0,0,1.32208974556972,0,0,0.587237189370939,0,0,0,0,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,1.24930726552346,0.473554504088034,0,0.201606743224732,1.06976078313403,1.01377082717959,0,0,0.639312809217652,0,0,0,0,0,0.189069634328136,0.665188192387692,0.087834785693126,1.11332214173056,0,0,0,0,0,0.238490624305342,0,0,8.94430833150173,4.30117297553062,19.4398680900253,0.56530794192401,0.419499436209906,15.6817283905838,25.7063808840277,64.8626065515015,106.729878806013,85.6884768677556,0,0,0.488124115096339,0.367663080345869,8.1014194788176,4.01848777278359,2.69435247151404,1.80178368773316,0,0,0.183201743930407,97.5175089026868,73.6782501881818,0,0,0,0,0,0,0,0,0,0.311211035399766,1.0776853765575,1.14423332179421,0,0,0,0,2.2818872861778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0.680593098960126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.16708818237254,1.40241773803446,0,0,0,0.982827216677626,1.77236972004421,0,0,1.20097467208968,0,0,0,0,0,0,0,0,0,1.44366447761074,0.462985512576611,1.90254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,1.12131084345361,0.43596006883328,0.4400297149257,0,0,0.845302752556,0,0,0,1.41849132023278,0,0,0,0,0.977208552881205,0,0,0,0,0,0,0,0,0,0,0,1.30303176000821,0,0,0,0.591092280605782,0.215627574859517,0.641715181398742,0,0,0,0,0,20.2231896465739,23.932916736322,34.3964876151909,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0.206768026122887,1.07857100409308,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308061348417659,0,0,0,34.120015221269,27.8953676653486,12.0912913017198,7.71136263451447,0,0,1.78413391131527,0.831076008928724,0,0,0,0,0,0,0.618246069886334,0.183138929636687,0.165018999841176,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744316738719335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,4.56702848308952,5.35246044999663,5.12682468456746,2.1440859791201,5.75907182320672,4.53931317834902,9.72056587028607,7.13812658664843,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.42080263306008,0,0,0,0,0,0,0.994147647766298,0.562677665642051,0,0,0,0.597743964753209,0.552567831062295,0,0,0,0,0.0898683511473268,0,0,0.789147245095469,2.3948309234694,1.11136990144637,0,0,0,0,0,2.17499872630438,0,0,0,0,0,0,0.885741385813839,0,1.52581736317083,0,0,0.219385397153973,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0.611030144933625,0,0,0,0.337005664903385,2.40773294189637,0,0,0,0,0,0,0,0.695052375913368,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0.52418000472609,9.97518988335376,0,0,0,0.290967049465258,2.02989091390451,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0.271808412147228,0.104602846312333,0,0,3.60252173225874,0.136905378891993,0,0,0,8.09918963689537,3.89572720819862,6.46085722119133,10.1836290254485,21.8905284549651,8.48051538279116,7.32299850105316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33969702408637,1.36381929150995,0,0,0,0.714695326373367,11.9176554665778,0.25426853765475,0,0,0,0,0,0,0,0.146552233678082,1.32506888912221,1.68067843270016,0.52893040697076,0,0,2.77647272676006,0.314408610199332,0,0,0,0,0,1.08803560673895,7.7713867147037,2.14441903734423,1.31149052283922,0,2.65820453990096,0.610131324509816,0.3755727921195,0,0.221858103073705,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0.363697318405119,0,0,0,2.40016658797892,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0.132864840313363,0.327130788511688,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8339315265117,0.319267718114302,0,0,0.0691572524642179,0,0,0,0,0,0,0,1.3807198521202,0,0,0.80682027481408,0,0,0,0,0,0,1.03343398250592,0.19024743058172,0,0,0.496211178389294,0,0,0,0,0.606965604236632,0.227662191351298,0.443511850813194,0,0,0.339848664884159,0.0657727735628491,0,0,0.156986185701028,0.942693539496011,0,0,0,0,0.929195074296532,0,0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| ||
|short_description=p@chr17:75123947..75123964,+ | |||
}} | }} |
Latest revision as of 21:38, 25 July 2015
Short description: | p@chr17:75123947..75123964, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:75123947..75123964, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 7.04e-20 | 36 |
meso-epithelial cell | 2.44e-16 | 45 |
endothelial cell of vascular tree | 3.52e-15 | 24 |
lining cell | 3.67e-10 | 58 |
barrier cell | 3.67e-10 | 58 |
lymphangioblast | 1.84e-09 | 6 |
endothelial cell of lymphatic vessel | 1.84e-09 | 6 |
vascular lymphangioblast | 1.84e-09 | 6 |
endothelial cell of artery | 6.79e-09 | 9 |
blood vessel endothelial cell | 1.63e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.63e-08 | 18 |
neutrophil | 4.74e-08 | 3 |
glomerular endothelial cell | 5.79e-08 | 5 |
granulocyte | 1.56e-07 | 8 |
endothelial cell of umbilical vein | 5.92e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
circulatory system | 3.46e-16 | 112 |
cardiovascular system | 2.27e-13 | 109 |
lateral plate mesoderm | 7.83e-13 | 203 |
blood | 1.69e-12 | 15 |
haemolymphatic fluid | 1.69e-12 | 15 |
organism substance | 1.69e-12 | 15 |
hemolymphoid system | 2.82e-10 | 108 |
endothelial tube | 6.79e-09 | 9 |
arterial system endothelium | 6.79e-09 | 9 |
endothelium of artery | 6.79e-09 | 9 |
adult organism | 1.58e-08 | 114 |
blood vessel endothelium | 1.63e-08 | 18 |
endothelium | 1.63e-08 | 18 |
cardiovascular system endothelium | 1.63e-08 | 18 |
hematopoietic system | 1.88e-07 | 98 |
blood island | 1.88e-07 | 98 |
valve | 1.94e-07 | 3 |
cardiac mesenchyme | 1.94e-07 | 3 |
cardial valve | 1.94e-07 | 3 |
tunica intima | 1.94e-07 | 3 |
heart layer | 1.94e-07 | 3 |
endocardium | 1.94e-07 | 3 |
endocardial cushion | 1.94e-07 | 3 |
presumptive endocardium | 1.94e-07 | 3 |
lymphatic vessel | 5.87e-07 | 8 |
lymph vasculature | 5.87e-07 | 8 |
lymphatic part of lymphoid system | 5.87e-07 | 8 |
vessel | 8.02e-07 | 68 |