FFCP PHASE1:Hg19::chr18:6774024..6774045,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:6774024..6774045,+ to FFCP PHASE1:Hg19::chr18:6774024..6774045,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79822 | |EntrezGene=79822 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25509 | |HGNC=25509 | ||
|TSSclassifier=strong | |||
|UniProt=E9PL26 | |UniProt=E9PL26 | ||
|association_with_transcript=23bp_to_ENST00000532723_5end | |||
|cluster_id=chr18:6774024..6774045,+ | |||
|description=CAGE_peak_8_at_ARHGAP28_5end | |||
|id=chr18:6774024..6774045,+ | |||
|ontology_enrichment_celltype=CL:0002543!1.02e-12!6;CL:0002618!7.32e-10!3;CL:0002322!5.38e-09!5;CL:0000071!4.25e-07!18;CL:0002546!4.25e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0002543;1.85e-26;6!CL:0002618;4.13e-14;3!CL:0000071;5.43e-09;18!CL:0002139;8.77e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002543,1.02e-26,6;CL:0002618,2.26e-14,3;CL:0000071,4.48e-09,18;CL:0002546,4.48e-09,18;CL:0002139,7.62e-07,24;CL:0000115,7.76e-07,36 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.18e-11;1!UBERON:0004140;3.28e-11;1!CL:0002546;5.43e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001638!1.80e-11!9;UBERON:0003920!1.80e-11!9;UBERON:0004582!1.80e-11!9;UBERON:0007023!4.04e-09!115;UBERON:0001986!4.25e-07!18;UBERON:0004638!4.25e-07!18;UBERON:0004852!4.25e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0001638;9.43e-18;9!UBERON:0003920;9.43e-18;9!UBERON:0004582;9.43e-18;9!UBERON:0001052;2.42e-11;4!UBERON:0007029;3.28e-11;1!UBERON:0004907;3.00e-09;5!UBERON:0000922;4.91e-09;49!UBERON:0004638;5.43e-09;18!UBERON:0001986;5.43e-09;18!UBERON:0004852;5.43e-09;18!UBERON:0002066;7.85e-09;5!UBERON:0000487;2.19e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001638,6.37e-18,9;UBERON:0003920,6.37e-18,9;UBERON:0004582,6.37e-18,9;UBERON:0001052,2.42e-11,4;UBERON:0007029,2.96e-11,1;UBERON:0004907,3.00e-09,5;UBERON:0004638,4.48e-09,18;UBERON:0001986,4.48e-09,18;UBERON:0004852,4.48e-09,18;UBERON:0002066,5.49e-09,5;UBERON:0000487,1.87e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,1.7859945656816,0.673588117878509,1.57656072676651,1.53316637465883,0,1.28241220751285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.348581828608555,0.829288440122964,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69077727312324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.710783897485092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,2.26690225624989,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.442306057399416,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.873633341210151,0.171986032471617,0,0,0,0.193978032976839,0,0.677942222341597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,1.2764859772478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33969702408637,1.78345599658994,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,2.82967749179399,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0,0,0.691743174681154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0.336283722218824,0,0,4.43511850813194,0,0,0,0,0,0,0.470958557103084,0,15.1346968189446,5.47895232305697,0,0,0.500335809236594,0,9.29931402945002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,1.45713297917742,0,0,0,0,0,0,0.154348316215889,0.655678681511872,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0.101988829741982,0,0.36757959813938,0,0.530450887527676,0,0,0,0,1.66645102024618,0.0645889098360061,0.186224142887574,0,0.12729431655633,1.41482032270754,0.217716747896961,1.02669990325584,0,0,0,0,0,0,0,0,0.122241444182866,0.813792356631477,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,1.7859945656816,0.673588117878509,1.57656072676651,1.53316637465883,0,1.28241220751285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.348581828608555,0.829288440122964,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69077727312324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.710783897485092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,2.26690225624989,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.442306057399416,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.873633341210151,0.171986032471617,0,0,0,0.193978032976839,0,0.677942222341597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,1.2764859772478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33969702408637,1.78345599658994,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,2.82967749179399,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0,0,0.691743174681154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0.336283722218824,0,0,4.43511850813194,0,0,0,0,0,0,0.470958557103084,0,15.1346968189446,5.47895232305697,0,0,0.500335809236594,0,9.29931402945002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,1.45713297917742,0,0,0,0,0,0,0.154348316215889,0.655678681511872,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0.101988829741982,0,0.36757959813938,0,0.530450887527676,0,0,0,0,1.66645102024618,0.0645889098360061,0.186224142887574,0,0.12729431655633,1.41482032270754,0.217716747896961,1.02669990325584,0,0,0,0,0,0,0,0,0.122241444182866,0.813792356631477,0,0.201273793591026,0 | ||
|short_description=p8@ARHGAP28 | |||
}} | }} |
Latest revision as of 06:58, 20 September 2015
Short description: | p8@ARHGAP28 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ARHGAP28_5end |
Coexpression cluster: | NA |
Association with transcript: | 23bp_to_ENST00000532723_5end |
EntrezGene: | ARHGAP28 |
HGNC: | 25509 |
UniProt: | E9PL26 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vein endothelial cell | 1.02e-26 | 6 |
endothelial cell of umbilical vein | 2.26e-14 | 3 |
blood vessel endothelial cell | 4.48e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.48e-09 | 18 |
endothelial cell of vascular tree | 7.62e-07 | 24 |
endothelial cell | 7.76e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
vein | 6.37e-18 | 9 |
venous blood vessel | 6.37e-18 | 9 |
venous system | 6.37e-18 | 9 |
rectum | 2.42e-11 | 4 |
surface | 2.96e-11 | 1 |
lower digestive tract | 3.00e-09 | 5 |
blood vessel endothelium | 4.48e-09 | 18 |
endothelium | 4.48e-09 | 18 |
cardiovascular system endothelium | 4.48e-09 | 18 |
umbilical vein | 5.49e-09 | 5 |
simple squamous epithelium | 1.87e-07 | 22 |