FFCP PHASE1:Hg19::chr19:10182115..10182157,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:10182115..10182157,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr19:10182115..10182157,+ | |||
|id=chr19:10182115..10182157,+ | |||
|ontology_enrichment_celltype=CL:0002322!2.57e-09!5;CL:0000181!1.00e-08!12;CL:0000417!1.00e-08!12;CL:0000668!1.00e-08!12;CL:0000414!1.00e-08!12;CL:0000412!1.00e-08!12;CL:0000182!1.00e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;4.75e-22;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.75e-22,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.98e-11;11!UBERON:0009497;1.13e-09;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.74e-14!19;UBERON:0006925!3.74e-14!19;UBERON:0008836!3.74e-14!19;UBERON:0008835!3.28e-12!22;UBERON:0003894!3.28e-12!22;UBERON:0002146!1.07e-11!1;UBERON:0005623!1.07e-11!1;UBERON:0009854!1.13e-11!23;UBERON:0007499!9.90e-11!25;UBERON:0009497!9.90e-11!25;UBERON:0000015!9.90e-11!25;UBERON:0002423!9.90e-11!25;UBERON:0006235!9.90e-11!25;UBERON:0004161!9.90e-11!25;UBERON:0005057!2.59e-10!26;UBERON:0009856!2.59e-10!26;UBERON:0002365!1.26e-08!31;UBERON:0002330!1.26e-08!31;UBERON:0002368!1.27e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.91e-37;19!UBERON:0006925;1.91e-37;19!UBERON:0002423;1.35e-28;25!UBERON:0002365;4.28e-23;31!UBERON:0002330;4.28e-23;31!UBERON:0002368;5.85e-20;33!UBERON:0000949;1.79e-14;43!UBERON:0005172;1.95e-10;52!UBERON:0005173;1.95e-10;52!UBERON:0002417;4.42e-08;58!UBERON:0000916;4.42e-08;58!UBERON:0002530;1.28e-07;57!UBERON:0001007;1.72e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.91e-37,19;UBERON:0006925,1.91e-37,19;UBERON:0008836,1.91e-37,19;UBERON:0008835,2.03e-32,22;UBERON:0003894,2.03e-32,22;UBERON:0009854,4.92e-31,23;UBERON:0007499,1.35e-28,25;UBERON:0009497,1.35e-28,25;UBERON:0000015,1.35e-28,25;UBERON:0002423,1.35e-28,25;UBERON:0006235,1.35e-28,25;UBERON:0004161,1.35e-28,25;UBERON:0009856,1.62e-27,26;UBERON:0002365,3.66e-23,31;UBERON:0002330,3.66e-23,31;UBERON:0002368,1.43e-20,35;UBERON:0000949,4.25e-16,45;UBERON:0003929,1.76e-13,54;UBERON:0005172,1.76e-13,54;UBERON:0005173,1.76e-13,54;UBERON:0002530,2.28e-12,59;UBERON:0002417,3.62e-12,60;UBERON:0000916,3.62e-12,60;UBERON:0005911,5.51e-09,82;UBERON:0001041,1.75e-08,87;UBERON:0005177,2.43e-07,101 | |||
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|short_description=p@chr19:10182115..10182157,+ | |||
}} | }} |
Latest revision as of 02:38, 26 July 2015
Short description: | p@chr19:10182115..10182157, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:10182115..10182157, + |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.75e-22 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.91e-37 | 19 |
digestive gland | 1.91e-37 | 19 |
liver bud | 1.91e-37 | 19 |
hepatic diverticulum | 2.03e-32 | 22 |
liver primordium | 2.03e-32 | 22 |
digestive tract diverticulum | 4.92e-31 | 23 |
epithelial sac | 1.35e-28 | 25 |
epithelium of foregut-midgut junction | 1.35e-28 | 25 |
anatomical boundary | 1.35e-28 | 25 |
hepatobiliary system | 1.35e-28 | 25 |
foregut-midgut junction | 1.35e-28 | 25 |
septum transversum | 1.35e-28 | 25 |
sac | 1.62e-27 | 26 |
exocrine gland | 3.66e-23 | 31 |
exocrine system | 3.66e-23 | 31 |
endocrine gland | 1.43e-20 | 35 |
endocrine system | 4.25e-16 | 45 |
gut epithelium | 1.76e-13 | 54 |
abdomen element | 1.76e-13 | 54 |
abdominal segment element | 1.76e-13 | 54 |
gland | 2.28e-12 | 59 |
abdominal segment of trunk | 3.62e-12 | 60 |
abdomen | 3.62e-12 | 60 |
endo-epithelium | 5.51e-09 | 82 |
foregut | 1.75e-08 | 87 |
trunk region element | 2.43e-07 | 101 |