FFCP PHASE1:Hg19::chr19:42891624..42891635,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:42891624..42891635,- to FFCP PHASE1:Hg19::chr19:42891624..42891635,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:42891624..42891635,- | |||
|description=CAGE_peak_at_chr19:42891624..42891635,- | |||
|id=chr19:42891624..42891635,- | |||
|ontology_enrichment_celltype=CL:0000066!1.11e-14!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.76e-09,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.67e-09;29 | |||
|ontology_enrichment_disease=DOID:305!1.14e-16!106;DOID:0050687!2.27e-15!143;DOID:162!1.59e-10!235;DOID:14566!1.28e-09!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.37e-15,106;DOID:0050687,6.43e-12,143;DOID:162,3.97e-09,235;DOID:14566,7.88e-09,239 | |||
|ontology_enrichment_uberon=UBERON:0000064!8.92e-10!219;UBERON:0000072!2.35e-07!46;UBERON:0008947!3.06e-07!38;UBERON:0003258!3.06e-07!38;UBERON:0001737!5.16e-07!9;UBERON:0000063!5.64e-07!97;UBERON:0001004!5.75e-07!72;UBERON:0004119!8.10e-07!169;UBERON:0000925!8.10e-07!169;UBERON:0006595!8.10e-07!169;UBERON:0000077!9.06e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.37e-10;9!UBERON:0001557;1.37e-10;9!UBERON:0000072;7.00e-08;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.19e-10,9;UBERON:0008947,7.04e-08,38;UBERON:0003258,7.04e-08,38;UBERON:0000072,9.10e-08,47;UBERON:0001557,3.50e-07,19;UBERON:0001004,5.80e-07,74 | |||
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| ||
|short_description=p@chr19:42891624..42891635,- | |||
}} | }} |
Latest revision as of 08:58, 26 July 2015
Short description: | p@chr19:42891624..42891635, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:42891624..42891635, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.76e-09 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.19e-10 | 9 |
respiratory primordium | 7.04e-08 | 38 |
endoderm of foregut | 7.04e-08 | 38 |
segment of respiratory tract | 9.10e-08 | 47 |
upper respiratory tract | 3.50e-07 | 19 |
respiratory system | 5.80e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.37e-15 | 106 |
cell type cancer | 6.43e-12 | 143 |
cancer | 3.97e-09 | 235 |
disease of cellular proliferation | 7.88e-09 | 239 |