FFCP PHASE1:Hg19::chr19:49631821..49631855,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:49631821..49631855,+ to FFCP PHASE1:Hg19::chr19:49631821..49631855,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8541 | |EntrezGene=8541 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9247 | |HGNC=9247 | ||
|TSSclassifier=strong | |||
|UniProt=O75145 | |UniProt=O75145 | ||
|association_with_transcript=-249bp_to_uc002pms.2_5end | |||
|cluster_id=chr19:49631821..49631855,+ | |||
|description=CAGE_peak_1_at_PPFIA3_5end | |||
|id=chr19:49631821..49631855,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.59e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.10e-07,10;CL:0000541,1.10e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!6.75e-44!235;DOID:14566!4.92e-43!239;DOID:0050687!5.36e-27!143;DOID:0050686!2.49e-25!137;DOID:305!8.02e-17!106;DOID:2531!6.30e-16!51;DOID:0060083!6.30e-16!51;DOID:1240!3.49e-15!39;DOID:8692!1.77e-12!31;DOID:3095!2.02e-09!22;DOID:2994!2.02e-09!22 | |||
|ontology_enrichment_disease_v019=DOID:1240;2.49e-15;39!DOID:8692;4.91e-13;31!DOID:2531;2.16e-10;51!DOID:0060083;2.16e-10;51!DOID:3095;5.16e-09;22!DOID:2994;5.16e-09;22 | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.35e-36,235;DOID:14566,1.50e-34,239;DOID:0050687,2.26e-22,143;DOID:0050686,2.88e-20,137;DOID:1240,6.09e-18,39;DOID:2531,1.14e-15,51;DOID:0060083,1.14e-15,51;DOID:8692,1.68e-13,31;DOID:305,1.03e-11,106;DOID:3095,4.41e-09,22;DOID:2994,4.41e-09,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.54503513781167,0.428201047781966,0.422863212287913,1.0007329835313,0.893922188854576,0.872338524100369,0,0.631719873426831,0,0.491467873003018,0.697801167972428,0,0,0,0.331397375727916,0.672325146451775,0,0,0.975865597581014,0.61560529038394,0,0,0.286235987131057,0.136874425072884,0.251085279189606,0.0764134057479513,0,0,0,0,0,0,0,0,0.774672005803016,0.142169232487422,0.880801318004542,0,0,0,0.223915474239924,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0.196709770113833,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,2.43806866313962,0,0,1.44575660953827,2.00535164254356,0.289693037921647,0.795285947051099,1.94653948121054,0.378139268656271,0.221729397462564,0.263504357079378,0.261958150995425,0,0,0.324547393654683,0.348259474598534,0.26591592103773,0,0,0,0,0,0.694281003215189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0.286836620748814,0.354668382198357,1.12135520028461,4.2699598291882,0.74000264525148,0.933633106199299,0.134710672069688,0.163461903113459,0.454072282934794,0,0.468642863667593,0,0,0,0.822041490506354,0.809364721840658,0,0,0.122834317311768,0,0,0.494533858557114,0,1.43723628363248,0.336672227908132,1.37630371859161,0,1.31693286264251,0.612975591598039,0.300476117813194,0.226864366320042,0.717558542755448,0,0,0,0.412210116953756,0.772921620136887,0,2.36286865137773,1.16924406193438,1.26216887122057,0.0920498986422993,0,0,0.201504196455281,0.67824236924195,0.193260853163297,0,0,4.14710600840624,5.96383957446684,3.95059405756363,2.69518743039963,4.79409616663694,5.10968302706162,0,0.643240938192885,0,0,0,0.709840800239063,0.168584690078102,0,0.220587945464788,0.435758888184812,0.237270619111097,0.404493924480493,0.392442930250692,0,0,5.60967095213783,0.8231480226628,0,0,0,0.590789906681404,1.7658523976586,0.245976877086227,0.686271241194102,0,0,0.201057944823262,0.0925884451585296,0.325808305310325,0,2.88662684050547,1.15930404975077,1.17408694235822,0.144366447761074,0,0,2.37061319387782,2.57545848628462,0.246217006087397,0,0.297262324577456,0,0,0.283550194484773,0,0,0.766765358330422,0.492663237895943,0.088048434013226,0.207328115540772,0,0,3.4923841860693,1.52795370223311,2.34434894420094,0,1.54241239054985,3.00343057843917,3.71574362419752,1.23344192779897,0.43596006883328,0.36669142910475,0,0,0,0.26593811658487,0,0.514414748524284,1.41849132023278,0.532844358032199,3.57444984145369,1.08524321078289,4.11620168390384,0,3.19852753868291,0,0,0,0.199945982364114,0,0.502257091432126,0,0.239624855491583,1.14861935834114,0,0.434343920002738,0,0.716243852959582,1.12085143993527,0,0,0.128343036279748,0,2.60279707715243,0,0,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0,0.117141414992713,2.70851489754947,0,0,0.664225598535437,0.553107505625109,0,0.195801157462741,0.343143423810856,0,0,0,0,0,0.604780586659361,0,0.153461973288062,0,0.768834895534206,1.53512174720011,0.482561763430822,0,0.154209693802656,0,0,0,0,0.604297247958111,0.40101294060657,0,0,0.182091168006717,0,0.902399225814824,0.231046011313244,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0.256450125116389,0.328014645699706,0.650756789328606,0,5.4941678891006,6.35323149388527,0,0,0,0,0.154048617114644,0.767518373630648,0.275673144969061,0.322260734604821,1.16013355131383,0.0852266274161009,0.356128142586949,0.165284915360978,0,0.127612712494584,0,0,1.5740617341532,0,0.924100740528266,0,0.869932992075073,0.18532421910392,0.429374660225974,1.86079184679834,1.2655176988749,0.571890581771475,0.511795582622668,0,0.318203247925937,0.78494864019923,0.179872457583315,0.274537029736055,0.824686816419805,1.2130948894399,0,0.421258456238981,0.975267478179181,0,0,0.136499911407986,0.141405431953713,0,1.65409603063837,0,0.438450885253763,0,0,1.82619339266434,0,0.563391205064483,0.717056761020258,0.0982490410131212,0.7133421029625,0,0,0,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,2.7774258493143,10.5872784078969,10.2916890712033,1.30062222588003,1.00988449083511,1.20941133692304,4.78278818186467,0.199579371432817,0.383010740264733,8.04359614350755,3.57084134302011,1.96558024679421,2.05411211129873,0.47003968731907,5.01268954180134,0.677167111206413,2.08764497634809,2.62339619348362,2.12923118845163,2.40453741329035,3.6868891717015,2.23676107892416,4.67177596793344,2.14926904942244,0.556812347790485,3.69262196843137,1.08182271390393,0.99921590399346,4.22961015263549,5.23993513143015,0.146508179271894,1.8204078262427,1.00299045849731,0.568272293612826,0.23874448473769,0,0.307160702099232,0,0.281338832821026,0.111308705022906,3.79048910721547,1.05562704063997,0,0.276283915531148,1.0077309914171,0.20453736500431,0,3.42143546427988,0,0.716084698702437,4.09257896181497,0.394573622547734,0,1.11136990144637,0,0.278304294485554,0,0.7812832832557,1.31189999994294,0,2.38966241399549,17.7977555204936,7.56440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| ||
|short_description=p1@PPFIA3 | |||
}} | }} |
Latest revision as of 06:20, 19 September 2015
Short description: | p1@PPFIA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PPFIA3_5end |
Coexpression cluster: | NA |
Association with transcript: | -249bp_to_uc002pms.2_5end |
EntrezGene: | PPFIA3 |
HGNC: | 9247 |
UniProt: | O75145 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.10e-07 | 10 |
melanoblast | 1.10e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.35e-36 | 235 |
disease of cellular proliferation | 1.50e-34 | 239 |
cell type cancer | 2.26e-22 | 143 |
organ system cancer | 2.88e-20 | 137 |
leukemia | 6.09e-18 | 39 |
hematologic cancer | 1.14e-15 | 51 |
immune system cancer | 1.14e-15 | 51 |
myeloid leukemia | 1.68e-13 | 31 |
carcinoma | 1.03e-11 | 106 |
germ cell and embryonal cancer | 4.41e-09 | 22 |
germ cell cancer | 4.41e-09 | 22 |