FFCP PHASE1:Hg19::chr19:805525..805543,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:805525..805543,+ to FFCP PHASE1:Hg19::chr19:805525..805543,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:805525..805543,+ | |||
|description=CAGE_peak_at_chr19:805525..805543,+ | |||
|id=chr19:805525..805543,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002567;2.36e-10;3!CL:0000148;6.67e-08;10!CL:0002262;6.87e-08;2!CL:1000398;6.87e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,1.91e-10,3;CL:0002262,4.77e-08,2;CL:1000398,4.77e-08,2;CL:0000148,6.96e-08,10;CL:0000541,6.96e-08,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002417!9.17e-09!61;UBERON:0000916!9.17e-09!61;UBERON:0005172!2.05e-07!55;UBERON:0005173!2.05e-07!55;UBERON:0003064!3.47e-07!37;UBERON:0003914!4.34e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0003513;4.68e-08;7!UBERON:0001281;6.87e-08;2!UBERON:0003497;6.87e-08;2!UBERON:0003909;6.87e-08;2!UBERON:0003835;6.87e-08;2!UBERON:0000007;1.87e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002417,3.88e-09,60;UBERON:0000916,3.88e-09,60;UBERON:0003513,2.92e-08,7;UBERON:0001281,4.77e-08,2;UBERON:0003497,4.77e-08,2;UBERON:0003909,4.77e-08,2;UBERON:0003835,4.77e-08,2;UBERON:0009569,5.10e-08,112;UBERON:0000007,1.27e-07,2 | |||
|phase1_expression=0.726713517082227,1.07050261945492,0.140954404095971,1.0007329835313,1.34088328328186,0.872338524100369,2.53299878168311,0,0.522371256399677,0,0.697801167972428,0.655324116390517,0.527533956456907,0,0.331397375727916,0,0,0.730310090387373,0,0.369363174230364,0.612002073732759,0.313454721478088,0.286235987131057,0,0.502170558379211,0.229240217243854,0.164201178899891,0.157421562627358,0,0,0,0,1.50602959389125,0.739508020333575,0.0774672005803016,0.142169232487422,0,0,0.200544447470142,0.217010870715852,0.223915474239924,0,0,0.726991193897824,0.377875943688809,0.242584061187816,0,0.411167888021826,0,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0.320929027076094,0,0,0,0,0,1.13477044938228,1.86846674698672,0.251248665256743,0,0,0,0,0,0.211255286311942,0,0,0.112328631146495,0,0,0,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0.167186495390678,0,0,0,0.334231370655521,0,0.443067789167242,0,0.128091319725675,0.130059347559878,0.164437904603676,0.276350017785848,0.579606171470105,0.296573126324121,0,0,0.113309342697566,0,0,0,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0.255725123687061,0.361439152384566,1.00267582127178,0.289693037921647,0.795285947051099,0,0,0.221729397462564,0.087834785693126,0.196468613246569,0,0.370784442784429,0,0.174129737299267,0.398873881556595,0.238490624305342,0,0,0.198762407366705,0.860234595106124,0,1.13061588384802,0,1.10047216776027,0.626984899610432,0.258416759169329,0,0.66944122552934,0,0,0.24406205754817,0.367663080345869,0,0.535798369704479,0,0.225222960966644,1.53316637465883,0.949265659568129,0.366403487860815,0,0,0,0,0.379891534993739,0.264818361626438,0.286836620748814,0.709336764396714,1.68203280042692,0,0.49333509683432,0,0.269421344139376,0.163461903113459,0.302714855289863,0,0.468642863667593,1.24864030732128,0.570471821544449,0.747243402759005,0.352303495931295,0.161872944368132,0,0.204154171254893,0,0.206651562351531,1.18800285728205,0.741800787835671,0,0,0,0.125118519871964,0,0,0.612975591598039,0.45071417671979,0,0.179389635688862,0,0.211931901159562,0.300091096084402,0.412210116953756,0.257640540045629,0.558350568994769,0,0.292311015483596,1.26216887122057,0.184099797284599,0.161646056818812,0,0.10075209822764,0.169560592310488,0.386521706326594,0.272746120590835,0.286804595389004,0.487894824518382,0.530119073285941,0.348581828608555,0.518305275076852,1.26160425437814,1.45990943630332,0,0,1.38134921352481,0.464367928031979,0,0.473227200159376,0.168584690078102,0.482022059766964,0.220587945464788,0,0.237270619111097,0.539325232640658,0,0.38474715694639,2.95262181849859,1.40241773803446,0,2.94017422771084,0,1.96565443335525,0.590789906681404,0,0.245976877086227,0.171567810298526,0.109750285408626,0,0.402115889646523,0.185176890317059,0,0,0,0,0,0.144366447761074,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0.492663237895943,0.968532774145487,0.414656231081544,0.720599767084807,0.75745460055828,0,1.14596527667483,1.17217447210047,1.71072446022705,0.925447434329912,0.300343057843917,1.14330573052231,0.336393253036082,0.87192013766656,0.36669142910475,0.258543431515556,0,0,0.26593811658487,1.04007436911366,0.771622122786426,0,0.266422179016099,0,1.62786481617433,0,0,0,0.791951872933429,0.301439377059586,0,0.199945982364114,0,0,0,0.239624855491583,1.14861935834114,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0.12269149171914,0,0,0,0.178428988797162,0,0.117141414992713,0.300946099727719,0,0,0,0,0.260650843404249,1.17480694477644,0.343143423810856,0,0,0,1.5156378572313,0,0.30239029332968,0.248107807818777,0,0,0.384417447767103,1.02341449813341,0.160853921143607,0,0.154209693802656,0.887808626565635,0.246381468041427,0.519254429183621,0.581051892299796,0.846016147141356,1.40354529212299,0.460404944679482,0.459257792658427,0.546273504020151,0.917870904715969,0,0.231046011313244,0,2.92278449306521,0.211103257785751,3.4120015221269,0.850468526382578,0.647747748306418,1.54227252690289,0,0.501689773854853,0,0.831076008928724,0.671624264166535,0.438519753291869,0,0,0.328014645699706,0.650756789328606,0.515205058238611,0.457847324091717,0.330037999682352,0,0,0,0.676695028044854,0.154048617114644,0,0.137836572484531,0.214840489736547,0.580066775656914,0.255679882248303,0.178064071293475,0.661139661443912,0.576570202095319,0.127612712494584,0.2023155617111,0.464845549297286,0,0,0.616067160352178,0,0.869932992075073,0.37064843820784,0.143124886741991,0,0,0,0.255897791311334,0.42793898803392,0.95460974377781,0.78494864019923,0,0.274537029736055,0,0.808729926293264,0,0,0.48763373908959,0,2.11300293513511,0.272999822815972,0.848432591722276,0,1.65409603063837,0,0.438450885253763,0,0,0.405820753925408,0.30982349809975,0.563391205064483,0,0,1.426684205925,0,0,0,0,0,0,0.670302275535787,1.08890984861323,0.564862804660675,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0.0711418433484141,0,0.199579371432817,0.191505370132367,0,0.324621940274555,0.280797178113459,0,0.313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| 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| ||
|short_description=p@chr19:805525..805543,+ | |||
}} | }} |
Latest revision as of 18:36, 27 July 2015
Short description: | p@chr19:805525..805543, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:805525..805543, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 1.91e-10 | 3 |
endothelial cell of sinusoid | 4.77e-08 | 2 |
endothelial cell of hepatic sinusoid | 4.77e-08 | 2 |
melanocyte | 6.96e-08 | 10 |
melanoblast | 6.96e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
abdominal segment of trunk | 3.88e-09 | 60 |
abdomen | 3.88e-09 | 60 |
trunk blood vessel | 2.92e-08 | 7 |
hepatic sinusoid | 4.77e-08 | 2 |
abdomen blood vessel | 4.77e-08 | 2 |
sinusoid | 4.77e-08 | 2 |
abdominal segment blood vessel | 4.77e-08 | 2 |
subdivision of trunk | 5.10e-08 | 112 |
pituitary gland | 1.27e-07 | 2 |