FFCP PHASE1:Hg19::chr1:165394215..165394226,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6258 | |EntrezGene=6258 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10479 | |HGNC=10479 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-6bp_to_ENST00000470566_5end | |||
|cluster_id=chr1:165394215..165394226,- | |||
|description=CAGE_peak_8_at_RXRG_5end | |||
|id=chr1:165394215..165394226,- | |||
|ontology_enrichment_celltype=CL:0000136!3.46e-09!15 | |||
|ontology_enrichment_celltype_v019=CL:0002521;8.96e-09;3!CL:0000136;9.35e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002521,8.96e-09,3;CL:0000136,7.41e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0004874;2.62e-23;1!UBERON:0006965;1.48e-12;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.18e-38!115;UBERON:0001893!1.58e-22!34;UBERON:0002791!7.87e-21!33;UBERON:0001049!2.12e-20!57;UBERON:0005068!2.12e-20!57;UBERON:0006241!2.12e-20!57;UBERON:0007135!2.12e-20!57;UBERON:0002780!3.08e-20!41;UBERON:0001890!3.08e-20!41;UBERON:0006240!3.08e-20!41;UBERON:0002020!6.11e-20!34;UBERON:0003528!6.11e-20!34;UBERON:0003080!1.21e-19!42;UBERON:0001869!5.33e-19!32;UBERON:0002616!1.34e-17!59;UBERON:0000955!5.08e-17!69;UBERON:0006238!5.08e-17!69;UBERON:0002619!1.19e-16!22;UBERON:0003075!1.28e-15!86;UBERON:0007284!1.28e-15!86;UBERON:0001950!1.81e-15!20;UBERON:0005743!3.06e-15!86;UBERON:0001017!8.37e-15!82;UBERON:0002346!1.25e-14!90;UBERON:0000956!2.22e-14!25;UBERON:0000203!2.22e-14!25;UBERON:0000153!1.15e-13!129;UBERON:0007811!1.15e-13!129;UBERON:0003056!1.28e-13!61;UBERON:0000073!3.44e-13!94;UBERON:0001016!3.44e-13!94;UBERON:0000033!1.63e-11!123;UBERON:0001871!2.04e-11!7;UBERON:0000200!7.19e-11!6;UBERON:0004121!9.67e-09!169;UBERON:0002771!2.13e-08!3;UBERON:0000924!2.28e-08!173;UBERON:0006601!2.28e-08!173;UBERON:0000475!3.56e-07!365;UBERON:0002420!4.21e-07!9;UBERON:0007245!4.21e-07!9;UBERON:0010009!4.21e-07!9;UBERON:0010011!4.21e-07!9;UBERON:0000454!4.21e-07!9;UBERON:0002308!4.57e-07!9;UBERON:0000125!4.57e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002426;2.10e-23;1!UBERON:0003831;2.10e-23;1!UBERON:0003898;2.10e-23;1!UBERON:0004830;2.10e-23;1!UBERON:0003830;2.10e-23;1!UBERON:0005175;2.10e-23;1!UBERON:0001774;2.10e-23;1!UBERON:0001103;2.10e-23;1!UBERON:0000989;2.62e-23;1!UBERON:0008811;2.62e-23;1!UBERON:0007029;4.59e-23;1!UBERON:0005090;2.07e-12;2!UBERON:0001630;2.07e-12;2!UBERON:0002190;8.96e-09;3!UBERON:0000014;9.36e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,2.10e-23,1;UBERON:0003831,2.10e-23,1;UBERON:0003898,2.10e-23,1;UBERON:0004830,2.10e-23,1;UBERON:0003830,2.10e-23,1;UBERON:0005175,2.10e-23,1;UBERON:0001774,2.10e-23,1;UBERON:0001103,2.10e-23,1;UBERON:0010084,2.10e-23,1;UBERON:0000989,2.62e-23,1;UBERON:0008811,2.62e-23,1;UBERON:0006258,2.62e-23,1;UBERON:0005876,2.62e-23,1;UBERON:0004874,2.62e-23,1;UBERON:0007029,5.13e-23,1;UBERON:0005090,2.07e-12,2;UBERON:0001630,2.07e-12,2;UBERON:0002190,8.96e-09,3;UBERON:0000014,9.63e-07,4 | |||
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| ||
|short_description=p8@RXRG | |||
}} | }} |
Latest revision as of 09:46, 18 September 2015
Short description: | p8@RXRG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_RXRG_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_ENST00000470566_5end |
EntrezGene: | RXRG |
HGNC: | 10479 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous fat cell | 8.96e-09 | 3 |
fat cell | 7.41e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
chest muscle | 2.10e-23 | 1 |
respiratory system muscle | 2.10e-23 | 1 |
skeletal muscle of trunk | 2.10e-23 | 1 |
respiratory system skeletal muscle | 2.10e-23 | 1 |
thoracic segment muscle | 2.10e-23 | 1 |
chest organ | 2.10e-23 | 1 |
muscle of trunk | 2.10e-23 | 1 |
diaphragm | 2.10e-23 | 1 |
future diaphragm | 2.10e-23 | 1 |
penis | 2.62e-23 | 1 |
intromittent organ | 2.62e-23 | 1 |
lateral plate mesenchyme | 2.62e-23 | 1 |
undifferentiated genital tubercle | 2.62e-23 | 1 |
somatopleure | 2.62e-23 | 1 |
surface | 5.13e-23 | 1 |
muscle structure | 2.07e-12 | 2 |
muscle organ | 2.07e-12 | 2 |
subcutaneous adipose tissue | 8.96e-09 | 3 |
zone of skin | 9.63e-07 | 4 |