FFCP PHASE1:Hg19::chr1:171076893..171076933,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:171076893..171076933,+ to FFCP PHASE1:Hg19::chr1:171076893..171076933,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:171076893..171076933,+ | |||
|description=CAGE_peak_at_chr1:171076893..171076933,+ | |||
|id=chr1:171076893..171076933,+ | |||
|ontology_enrichment_celltype=CL:0000136!1.35e-08!15 | |||
|ontology_enrichment_celltype_v019=CL:0002564;2.76e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002564,2.78e-09,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.58e-51!115;UBERON:0002616!9.21e-24!59;UBERON:0000955!2.71e-21!69;UBERON:0006238!2.71e-21!69;UBERON:0001017!8.48e-20!82;UBERON:0001049!1.00e-19!57;UBERON:0005068!1.00e-19!57;UBERON:0006241!1.00e-19!57;UBERON:0007135!1.00e-19!57;UBERON:0000153!2.04e-19!129;UBERON:0007811!2.04e-19!129;UBERON:0005743!2.09e-19!86;UBERON:0000033!9.02e-19!123;UBERON:0000073!4.09e-17!94;UBERON:0001016!4.09e-17!94;UBERON:0003075!1.07e-16!86;UBERON:0007284!1.07e-16!86;UBERON:0003080!5.03e-16!42;UBERON:0002346!2.63e-15!90;UBERON:0002780!3.37e-15!41;UBERON:0001890!3.37e-15!41;UBERON:0006240!3.37e-15!41;UBERON:0000475!2.23e-14!365;UBERON:0004121!4.98e-13!169;UBERON:0000481!7.14e-13!347;UBERON:0000924!2.71e-12!173;UBERON:0006601!2.71e-12!173;UBERON:0000477!2.52e-11!286;UBERON:0003056!5.57e-11!61;UBERON:0002020!2.22e-10!34;UBERON:0003528!2.22e-10!34;UBERON:0001893!4.51e-10!34;UBERON:0002791!1.51e-09!33;UBERON:0001869!8.48e-09!32;UBERON:0002298!3.13e-08!8;UBERON:0000062!4.36e-08!511;UBERON:0001894!9.05e-08!7;UBERON:0006222!9.05e-08!7;UBERON:0000483!9.64e-08!309;UBERON:0004111!1.17e-07!241;UBERON:0000119!1.84e-07!312;UBERON:0005284!2.76e-07!5;UBERON:0002619!3.46e-07!22;UBERON:0001950!5.29e-07!20;UBERON:0000468!5.80e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;2.61e-14;5!UBERON:0002216;2.61e-14;5!UBERON:0011134;2.61e-14;5!UBERON:0002209;2.61e-14;5!UBERON:0002213;2.61e-14;5!UBERON:0007844;2.61e-14;5!UBERON:0011138;2.61e-14;5!UBERON:0001130;2.61e-14;5!UBERON:0001066;2.61e-14;5!UBERON:0001468;2.61e-14;5!UBERON:0002242;2.76e-09;3!UBERON:0005284;4.49e-09;5!UBERON:0004905;9.86e-09;8!UBERON:0000982;9.86e-09;8!UBERON:0004770;9.86e-09;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.23e-15,114;UBERON:0011135,2.61e-14,5;UBERON:0002216,2.61e-14,5;UBERON:0011134,2.61e-14,5;UBERON:0002209,2.61e-14,5;UBERON:0002213,2.61e-14,5;UBERON:0005856,2.61e-14,5;UBERON:0005866,2.61e-14,5;UBERON:0005863,2.61e-14,5;UBERON:0007844,2.61e-14,5;UBERON:0011138,2.61e-14,5;UBERON:0001130,2.61e-14,5;UBERON:0001066,2.61e-14,5;UBERON:0001468,2.61e-14,5;UBERON:0002242,2.78e-09,3;UBERON:0003068,2.78e-09,3;UBERON:0002328,2.78e-09,3;UBERON:0004880,2.78e-09,3;UBERON:0005284,4.43e-09,5;UBERON:0004905,9.85e-09,8;UBERON:0000982,9.85e-09,8;UBERON:0004770,9.85e-09,8;UBERON:0011216,4.10e-08,223 | |||
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| ||
|short_description=p@chr1:171076893..171076933,+ | |||
}} | }} |
Latest revision as of 00:17, 28 July 2015
Short description: | p@chr1:171076893..171076933, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:171076893..171076933, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nucleus pulposus cell of intervertebral disc | 2.78e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.23e-15 | 114 |
intervertebral cartilage | 2.61e-14 | 5 |
symphysis | 2.61e-14 | 5 |
nonsynovial joint | 2.61e-14 | 5 |
fibrous joint | 2.61e-14 | 5 |
cartilaginous joint | 2.61e-14 | 5 |
developing mesenchymal condensation | 2.61e-14 | 5 |
pre-cartilage condensation | 2.61e-14 | 5 |
cartilaginous condensation | 2.61e-14 | 5 |
cartilage element | 2.61e-14 | 5 |
post-cranial axial skeletal system | 2.61e-14 | 5 |
vertebral column | 2.61e-14 | 5 |
intervertebral disk | 2.61e-14 | 5 |
intervertebral joint | 2.61e-14 | 5 |
nucleus pulposus | 2.78e-09 | 3 |
axial mesoderm | 2.78e-09 | 3 |
notochord | 2.78e-09 | 3 |
chordamesoderm | 2.78e-09 | 3 |
brain vasculature | 4.43e-09 | 5 |
articulation | 9.85e-09 | 8 |
skeletal joint | 9.85e-09 | 8 |
articular system | 9.85e-09 | 8 |
organ system subdivision | 4.10e-08 | 223 |