FFCP PHASE1:Hg19::chr1:196743963..196743993,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10878 | |EntrezGene=10878 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16980 | |HGNC=16980 | ||
|TSSclassifier=strong | |||
|UniProt=B4DPR0,F5H414 | |UniProt=B4DPR0,F5H414 | ||
|association_with_transcript=17bp_to_ENST00000391985,ENST00000542253_5end | |||
|cluster_id=chr1:196743963..196743993,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_CFHR3_5end | |||
|id=chr1:196743963..196743993,+ | |||
|ontology_enrichment_celltype=CL:0000181!2.65e-12!12;CL:0000417!2.65e-12!12;CL:0000668!2.65e-12!12;CL:0000414!2.65e-12!12;CL:0000412!2.65e-12!12;CL:0000182!2.65e-12!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.81e-25;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.81e-25,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!3.28e-21!3;UBERON:0004854!3.28e-21!3;UBERON:0009034!3.28e-21!3;UBERON:0002095!3.28e-21!3;UBERON:0004782!3.28e-21!3;UBERON:0003281!3.28e-21!3;UBERON:0009664!3.28e-21!3;UBERON:0002296!3.28e-21!3;UBERON:0005602!3.28e-21!3;UBERON:0001179!3.28e-21!3;UBERON:0006293!3.28e-21!3;UBERON:0005057!4.29e-21!26;UBERON:0005172!3.59e-17!55;UBERON:0005173!3.59e-17!55;UBERON:0001301!1.93e-16!1;UBERON:0002417!2.00e-15!61;UBERON:0000916!2.00e-15!61;UBERON:0002107!2.16e-13!19;UBERON:0006925!2.16e-13!19;UBERON:0008836!2.16e-13!19;UBERON:0008835!1.31e-11!22;UBERON:0003894!1.31e-11!22;UBERON:0009854!4.08e-11!23;UBERON:0005177!9.09e-11!107;UBERON:0007499!3.01e-10!25;UBERON:0009497!3.01e-10!25;UBERON:0000015!3.01e-10!25;UBERON:0002423!3.01e-10!25;UBERON:0006235!3.01e-10!25;UBERON:0004161!3.01e-10!25;UBERON:0009569!3.76e-10!113;UBERON:0009856!7.28e-10!26;UBERON:0004177!1.18e-09!7;UBERON:0003127!7.49e-09!2;UBERON:0000945!1.47e-08!8;UBERON:0010039!1.47e-08!8;UBERON:0002365!2.60e-08!31;UBERON:0002330!2.60e-08!31;UBERON:0002368!2.19e-07!35;UBERON:0001041!3.24e-07!98;UBERON:0000466!3.99e-07!126;UBERON:0003887!4.23e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.07e-28;19!UBERON:0006925;3.07e-28;19!UBERON:0002423;1.21e-21;25!UBERON:0002365;3.74e-18;31!UBERON:0002330;3.74e-18;31!UBERON:0002368;1.23e-14;33!UBERON:0000949;2.76e-12;43!UBERON:0005172;4.58e-09;52!UBERON:0005173;4.58e-09;52!UBERON:0002530;7.35e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.07e-28,19;UBERON:0006925,3.07e-28,19;UBERON:0008836,3.07e-28,19;UBERON:0008835,1.71e-24,22;UBERON:0003894,1.71e-24,22;UBERON:0009854,1.84e-23,23;UBERON:0007499,1.21e-21,25;UBERON:0009497,1.21e-21,25;UBERON:0000015,1.21e-21,25;UBERON:0002423,1.21e-21,25;UBERON:0006235,1.21e-21,25;UBERON:0004161,1.21e-21,25;UBERON:0009856,7.73e-21,26;UBERON:0002365,1.37e-17,31;UBERON:0002330,1.37e-17,31;UBERON:0002368,1.18e-15,35;UBERON:0000949,2.58e-12,45;UBERON:0003929,2.34e-10,54;UBERON:0005172,2.34e-10,54;UBERON:0005173,2.34e-10,54;UBERON:0002530,1.59e-09,59;UBERON:0002417,2.25e-09,60;UBERON:0000916,2.25e-09,60;UBERON:0005911,5.45e-07,82 | |||
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|short_description=p1@CFHR3 | |||
}} | }} |
Latest revision as of 12:34, 19 September 2015
Short description: | p1@CFHR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CFHR3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 17bp_to_ENST00000391985, ENST00000542253_5end |
EntrezGene: | CFHR3 |
HGNC: | 16980 |
UniProt: | B4DPR0F5H414 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.81e-25 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 3.07e-28 | 19 |
digestive gland | 3.07e-28 | 19 |
liver bud | 3.07e-28 | 19 |
hepatic diverticulum | 1.71e-24 | 22 |
liver primordium | 1.71e-24 | 22 |
digestive tract diverticulum | 1.84e-23 | 23 |
epithelial sac | 1.21e-21 | 25 |
epithelium of foregut-midgut junction | 1.21e-21 | 25 |
anatomical boundary | 1.21e-21 | 25 |
hepatobiliary system | 1.21e-21 | 25 |
foregut-midgut junction | 1.21e-21 | 25 |
septum transversum | 1.21e-21 | 25 |
sac | 7.73e-21 | 26 |
exocrine gland | 1.37e-17 | 31 |
exocrine system | 1.37e-17 | 31 |
endocrine gland | 1.18e-15 | 35 |
endocrine system | 2.58e-12 | 45 |
gut epithelium | 2.34e-10 | 54 |
abdomen element | 2.34e-10 | 54 |
abdominal segment element | 2.34e-10 | 54 |
gland | 1.59e-09 | 59 |
abdominal segment of trunk | 2.25e-09 | 60 |
abdomen | 2.25e-09 | 60 |
endo-epithelium | 5.45e-07 | 82 |