FFCP PHASE1:Hg19::chr1:56990149..56990181,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:56990149..56990181,- to FFCP PHASE1:Hg19::chr1:56990149..56990181,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:56990149..56990181,- | |||
|coexpression_cluster_id=C666 | |||
|description=CAGE_peak_at_chr1:56990149..56990181,- | |||
|id=chr1:56990149..56990181,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000135;1.03e-16;3!CL:0000388;1.03e-16;3!CL:0002559;1.96e-09;5!CL:0000214;4.82e-08;3!CL:0000197;5.49e-08;6!CL:0000098;5.49e-08;6!CL:0002167;5.49e-08;6!CL:0000346;2.42e-07;3!CL:1000428;2.42e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,1.01e-16,3;CL:0000388,1.01e-16,3;CL:0002559,2.05e-09,5;CL:0000197,3.87e-08,6;CL:0000098,3.87e-08,6;CL:0002167,3.87e-08,6;CL:0000136,3.99e-08,15;CL:0000214,4.75e-08,3;CL:0000346,2.50e-07,3;CL:1000428,2.50e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0007297;4.07e-11;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.93e-11!115;UBERON:0000475!4.12e-10!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;1.03e-16;3!UBERON:0000043;1.03e-16;3!UBERON:0007845;1.03e-16;3!UBERON:0005406;5.78e-11;2!UBERON:0002073;1.96e-09;5!UBERON:0006915;4.82e-08;3!UBERON:0007616;4.82e-08;3!UBERON:0002217;4.82e-08;3!UBERON:0002018;4.82e-08;3!UBERON:0006947;1.10e-07;3!UBERON:0004054;1.10e-07;3!UBERON:0000412;2.42e-07;3!UBERON:0001992;2.42e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.01e-16,3;UBERON:0000043,1.01e-16,3;UBERON:0007845,1.01e-16,3;UBERON:0005406,3.17e-11,2;UBERON:0002073,2.05e-09,5;UBERON:0005086,2.05e-09,5;UBERON:0006915,4.75e-08,3;UBERON:0007616,4.75e-08,3;UBERON:0002217,4.75e-08,3;UBERON:0002018,4.75e-08,3;UBERON:0006947,1.59e-07,3;UBERON:0004054,1.59e-07,3;UBERON:0000412,2.50e-07,3;UBERON:0001992,2.50e-07,3 | |||
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| ||
|short_description=p@chr1:56990149..56990181,- | |||
}} | }} |
Latest revision as of 09:19, 28 July 2015
Short description: | p@chr1:56990149..56990181, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:56990149..56990181, - |
Coexpression cluster: | C666_tenocyte_Synoviocyte_Fibroblast_Chondrocyte_Nucleus_normal_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 1.01e-16 | 3 |
tendon cell | 1.01e-16 | 3 |
hair follicle cell | 2.05e-09 | 5 |
receptor cell | 3.87e-08 | 6 |
sensory epithelial cell | 3.87e-08 | 6 |
olfactory epithelial cell | 3.87e-08 | 6 |
fat cell | 3.99e-08 | 15 |
synovial cell | 4.75e-08 | 3 |
hair follicle dermal papilla cell | 2.50e-07 | 3 |
stem cell of epidermis | 2.50e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 1.01e-16 | 3 |
tendon | 1.01e-16 | 3 |
regular connective tissue | 1.01e-16 | 3 |
perirenal fat | 3.17e-11 | 2 |
hair follicle | 2.05e-09 | 5 |
hair follicle placode | 2.05e-09 | 5 |
stratified squamous epithelium | 4.75e-08 | 3 |
layer of synovial tissue | 4.75e-08 | 3 |
synovial joint | 4.75e-08 | 3 |
synovial membrane of synovial joint | 4.75e-08 | 3 |
male genital duct | 1.59e-07 | 3 |
internal male genitalia | 1.59e-07 | 3 |
dermal papilla | 2.50e-07 | 3 |
papillary layer of dermis | 2.50e-07 | 3 |