FFCP PHASE1:Hg19::chr20:56100179..56100208,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:56100179..56100208,- to FFCP PHASE1:Hg19::chr20:56100179..56100208,-: NSchange) |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=140690 | |EntrezGene=140690 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16234 | |HGNC=16234 | ||
|TSSclassifier=strong | |||
|UniProt=A1L4C6,A6XGL8,A6XGN1,A6XGN4,A6XGN3 | |UniProt=A1L4C6,A6XGL8,A6XGN1,A6XGN4,A6XGN3 | ||
|association_with_transcript=0bp_to_uc002xym.2,uc010giw.1,uc010giy.1,uc010giz.1,uc010gjf.2,uc010gjg.2,uc010gji.1_5end | |||
|cluster_id=chr20:56100179..56100208,- | |||
|coexpression_cluster_id=C4051 | |||
|description=CAGE_peak_1_at_CTCFL_5end | |||
|id=chr20:56100179..56100208,- | |||
|ontology_enrichment_celltype=CL:0000039!1.41e-09!7;CL:0000586!1.41e-09!7;CL:0002322!3.67e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0002535;1.86e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,1.86e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.67e-13;10!UBERON:0005564;2.67e-13;10 | |||
|ontology_enrichment_disease=DOID:1036!4.06e-09!8 | |||
|ontology_enrichment_disease_v019=DOID:1036;4.11e-29;8!DOID:3193;2.40e-08;2!DOID:962;2.40e-08;2!DOID:8692;5.54e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,4.11e-29,8;DOID:3193,2.48e-08,2;DOID:962,2.48e-08,2;DOID:8692,9.87e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.11e-18!8;UBERON:0003135!1.19e-17!11;UBERON:0003101!2.51e-08!22;UBERON:0000079!2.51e-08!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.84e-16;8!UBERON:0003135;3.79e-12;11!UBERON:0006955;1.86e-08;2!UBERON:0004801;1.86e-08;2!UBERON:0003714;2.40e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.84e-16,8;UBERON:0003135,3.79e-12,11;UBERON:0006955,1.86e-08,2;UBERON:0004801,1.86e-08,2;UBERON:0003714,2.48e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.67993285038334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357198913136319,0.673588117878509,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.853815942907168,0,0.464775771478074,0.518305275076852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.308061348417659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,83.7387600071643,0,0,0,0,0,0,0,0,0,3.58913193817589,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,107.157938793161,93.7178914038795,97.3365204459888,53.7003063609444,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.8260443835103,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.803765742325096,0.137539436597234,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.14509409770568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,1.10609528212909,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,123.320134136339,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0.407955318967927,4.54269588951453,0.0918948995348449,0.752122617877125,10.3816816558988,27.064377145774,0,0,0,0,0,0.0620747142958579,0.448527450322454,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.67993285038334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357198913136319,0.673588117878509,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.853815942907168,0,0.464775771478074,0.518305275076852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.308061348417659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,83.7387600071643,0,0,0,0,0,0,0,0,0,3.58913193817589,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,107.157938793161,93.7178914038795,97.3365204459888,53.7003063609444,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.8260443835103,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.803765742325096,0.137539436597234,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.14509409770568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,1.10609528212909,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,123.320134136339,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0.407955318967927,4.54269588951453,0.0918948995348449,0.752122617877125,10.3816816558988,27.064377145774,0,0,0,0,0,0.0620747142958579,0.448527450322454,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0.320568492303233 | ||
|short_description=p1@CTCFL | |||
}} | }} |
Latest revision as of 04:18, 17 September 2015
Short description: | p1@CTCFL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CTCFL_5end |
Coexpression cluster: | C4051_small_chronic_adrenal_testis_cholangiocellular_epidermoid_choriocarcinoma |
Association with transcript: | 0bp_to_uc002xym.2, uc010giw.1, uc010giy.1, uc010giz.1, uc010gjf.2, uc010gjg.2, uc010gji.1_5end |
EntrezGene: | CTCFL |
HGNC: | 16234 |
UniProt: | A1L4C6A6XGL8A6XGN1A6XGN4A6XGN3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 1.86e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 1.84e-16 | 8 |
male reproductive organ | 3.79e-12 | 11 |
uterine epithelium | 1.86e-08 | 2 |
cervix epithelium | 1.86e-08 | 2 |
neural tissue | 2.48e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 4.11e-29 | 8 |
peripheral nerve sheath neoplasm | 2.48e-08 | 2 |
neurofibroma | 2.48e-08 | 2 |
myeloid leukemia | 9.87e-08 | 31 |