FFCP PHASE1:Hg19::chr21:17566746..17566756,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr21:17566746..17566756,+ to FFCP PHASE1:Hg19::chr21:17566746..17566756,+: NSchange) |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=1274 | |HGNC=1274 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-31bp_to_ENST00000445461_5end | |||
|cluster_id=chr21:17566746..17566756,+ | |||
|coexpression_cluster_id=C4067 | |||
|description=CAGE_peak_35_at_LINC00478_5end | |||
|id=chr21:17566746..17566756,+ | |||
|ontology_enrichment_celltype=CL:0002605!2.77e-08!3;CL:0002150!1.33e-07!3;CL:0000861!1.33e-07!3;CL:0000064!3.26e-07!3;CL:0005012!3.26e-07!3;CL:0000067!3.26e-07!3;CL:0002304!3.26e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002605;3.96e-66;3!CL:0002319;5.44e-30;25!CL:0000128;3.92e-29;7!CL:0000126;3.92e-29;7!CL:0000127;3.92e-29;7!CL:0000243;5.35e-27;15!CL:0000125;5.35e-27;15!CL:0000095;2.84e-24;17!CL:0000540;1.50e-09;6!CL:0000404;1.50e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,4.68e-66,3;CL:0002319,5.44e-30,25;CL:0000128,4.21e-29,7;CL:0000126,4.21e-29,7;CL:0000127,4.21e-29,7;CL:0002453,4.21e-29,7;CL:0000243,5.59e-27,15;CL:0000125,5.59e-27,15;CL:0000030,5.59e-27,15;CL:0000339,5.59e-27,15;CL:0000095,2.96e-24,17;CL:0000123,2.96e-24,17;CL:0000133,7.99e-14,59;CL:0000221,1.50e-11,72;CL:0000333,2.84e-11,41;CL:0000540,1.44e-09,6;CL:0000031,1.44e-09,6;CL:0000404,1.44e-09,6;CL:0000047,1.69e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000339;5.35e-27;15!CL:0000133;1.01e-10;59!CL:0000031;1.50e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!2.13e-14!9;UBERON:0001778!3.26e-07!3;UBERON:0001775!3.26e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;1.13e-08;25!UBERON:0000203;1.13e-08;25!UBERON:0003528;3.64e-07;34!UBERON:0002791;3.64e-07;32!UBERON:0002020;3.64e-07;34!UBERON:0001869;3.64e-07;32!UBERON:0001893;3.64e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.17e-10,81;UBERON:0001016,1.88e-09,89;UBERON:0000956,1.15e-08,25;UBERON:0000203,1.15e-08,25;UBERON:0000955,2.97e-07,68;UBERON:0006238,2.97e-07,68;UBERON:0002791,4.89e-07,32;UBERON:0001869,4.89e-07,32 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,2.0036519099174,0.410623275218653,1.12988375635323,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.221729397462564,0.263504357079378,0.0654895377488563,0,0,0.324547393654683,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0,0.435758888184812,0.237270619111097,0.134831308160164,0.588664395376038,0.38474715694639,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,1.27587750330633,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0.0852266274161009,0,0.330569830721956,0.192190067365106,0.382838137483752,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0.54907405947211,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0.19566461893209,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0.19351266257817,0.511625219603299,0.410577285266046,0,0.176512253383001,0.225980740780532,0,0,0,0,0,0,0,0,0.229073192331831,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,3.87376177821446,0,0,0,0,0,0,0,0.233713309847224,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0.107410557042488,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0.336283722218824,0.606965604236632,0.455324382702595,0,0.115233987555779,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0.436350690340377,0.5290268405154,0.371995018166751,0.462175628631418,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0.476128862927481,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,2.0036519099174,0.410623275218653,1.12988375635323,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.221729397462564,0.263504357079378,0.0654895377488563,0,0,0.324547393654683,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0,0.435758888184812,0.237270619111097,0.134831308160164,0.588664395376038,0.38474715694639,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,1.27587750330633,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0.0852266274161009,0,0.330569830721956,0.192190067365106,0.382838137483752,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0.54907405947211,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0.19566461893209,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0.19351266257817,0.511625219603299,0.410577285266046,0,0.176512253383001,0.225980740780532,0,0,0,0,0,0,0,0,0.229073192331831,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,3.87376177821446,0,0,0,0,0,0,0,0.233713309847224,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0.107410557042488,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0.336283722218824,0.606965604236632,0.455324382702595,0,0.115233987555779,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0.436350690340377,0.5290268405154,0.371995018166751,0.462175628631418,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0.476128862927481,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p35@LINC00478 | |||
}} | }} |
Latest revision as of 19:37, 17 September 2015
Short description: | p35@LINC00478 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_35_at_LINC00478_5end |
Coexpression cluster: | C4067_medulloblastoma_Astrocyte_myeloma_embryonic_epitheloid_adrenal_Dendritic |
Association with transcript: | -31bp_to_ENST00000445461_5end |
EntrezGene: | NA |
HGNC: | 1274 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 4.68e-66 | 3 |
neural cell | 5.44e-30 | 25 |
oligodendrocyte | 4.21e-29 | 7 |
macroglial cell | 4.21e-29 | 7 |
astrocyte | 4.21e-29 | 7 |
oligodendrocyte precursor cell | 4.21e-29 | 7 |
glial cell (sensu Vertebrata) | 5.59e-27 | 15 |
glial cell | 5.59e-27 | 15 |
glioblast | 5.59e-27 | 15 |
glioblast (sensu Vertebrata) | 5.59e-27 | 15 |
neuron associated cell | 2.96e-24 | 17 |
neuron associated cell (sensu Vertebrata) | 2.96e-24 | 17 |
neurectodermal cell | 7.99e-14 | 59 |
ectodermal cell | 1.50e-11 | 72 |
migratory neural crest cell | 2.84e-11 | 41 |
neuron | 1.44e-09 | 6 |
neuroblast | 1.44e-09 | 6 |
electrically signaling cell | 1.44e-09 | 6 |
neuronal stem cell | 1.69e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.17e-10 | 81 |
nervous system | 1.88e-09 | 89 |
cerebral cortex | 1.15e-08 | 25 |
pallium | 1.15e-08 | 25 |
brain | 2.97e-07 | 68 |
future brain | 2.97e-07 | 68 |
regional part of telencephalon | 4.89e-07 | 32 |
cerebral hemisphere | 4.89e-07 | 32 |