FFCP PHASE1:Hg19::chr21:28216667..28216680,-: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr21:28216667..28216680,- to FFCP PHASE1:Hg19::chr21:28216667..28216680,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr21:28216667..28216680,- | |||
|description=CAGE_peak_at_chr21:28216667..28216680,- | |||
|id=chr21:28216667..28216680,- | |||
|ontology_enrichment_celltype=CL:0000055!8.45e-09!180;CL:0000057!8.47e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0002595;3.53e-15;5!CL:0000153;1.23e-12;9!CL:0000447;1.23e-12;9!CL:0002617;2.97e-10;2!CL:0002593;7.22e-10;2!CL:0002541;1.84e-07;3!CL:0000327;1.85e-07;15!CL:0000138;1.95e-07;6!CL:0002615;3.57e-07;3!CL:0000214;4.22e-07;3!CL:0000499;4.69e-07;28!CL:0000135;7.57e-07;3!CL:0000388;7.57e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,6.26e-15,5;CL:0000153,1.23e-12,9;CL:0000447,1.23e-12,9;CL:0002617,1.84e-10,2;CL:0002593,1.55e-09,2;CL:0000327,1.84e-07,15;CL:0002541,1.93e-07,3;CL:0000058,2.23e-07,6;CL:0000138,2.23e-07,6;CL:0002615,2.98e-07,3;CL:0000214,3.48e-07,3;CL:0000499,4.37e-07,28;CL:0000135,6.17e-07,3;CL:0000388,6.17e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;3.53e-15;5!UBERON:0001533;3.53e-15;5!UBERON:0004457;1.23e-12;9!UBERON:0000042;1.23e-12;9!UBERON:0003513;7.25e-11;7!UBERON:0002456;7.22e-10;2!UBERON:0003124;1.84e-07;3!UBERON:0000920;1.84e-07;3!UBERON:0003688;1.95e-07;6!UBERON:0002358;1.95e-07;6!UBERON:0003684;1.95e-07;6!UBERON:0001178;1.95e-07;6!UBERON:0006915;4.22e-07;3!UBERON:0007616;4.22e-07;3!UBERON:0002217;4.22e-07;3!UBERON:0002018;4.22e-07;3!UBERON:0007846;7.57e-07;3!UBERON:0000043;7.57e-07;3!UBERON:0007845;7.57e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,6.26e-15,5;UBERON:0001533,6.26e-15,5;UBERON:0003513,1.08e-10,7;UBERON:0002456,1.55e-09,2;UBERON:0004457,2.26e-09,12;UBERON:0000042,2.26e-09,12;UBERON:0004573,1.52e-07,33;UBERON:0004571,1.52e-07,33;UBERON:0004923,1.84e-07,66;UBERON:0000920,1.93e-07,3;UBERON:0003688,2.44e-07,6;UBERON:0002358,2.44e-07,6;UBERON:0003684,2.44e-07,6;UBERON:0001178,2.44e-07,6;UBERON:0006915,3.48e-07,3;UBERON:0007616,3.48e-07,3;UBERON:0002217,3.48e-07,3;UBERON:0002018,3.48e-07,3;UBERON:0001637,4.01e-07,42;UBERON:0003509,4.01e-07,42;UBERON:0004572,4.01e-07,42;UBERON:0007846,6.17e-07,3;UBERON:0000043,6.17e-07,3;UBERON:0007845,6.17e-07,3 | |||
|phase1_expression=1.45342703416445,2.5692062866918,0.704772020479856,4.00293193412522,1.34088328328186,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0.662794751455832,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,1.00267582127178,4.20054904986389,0,1.45990461090791,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0.825354125820202,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,1.05927344650575,1.14734648299525,0.709336764396714,0,0,0.74000264525148,0,0,0,0.151357427644931,0,0.234321431833797,0,0.570471821544449,0,0,0,0,0.204154171254893,0,0.103325781175765,1.18800285728205,0.247266929278557,0,0,0,0,0,0,1.22595118319608,0.45071417671979,0.113432183160021,0,0.427114777637135,0.423863802319124,0.600182192168805,0.103052529238439,1.28820270022815,0,0.168776332241266,0.584622030967192,1.26216887122057,0.184099797284599,1.13152239773168,0.355009592516614,0.201504196455281,0.339121184620975,0.193260853163297,0,0.286804595389004,0.121973706129595,0,0,0.10366105501537,0,0,0,1.28648187638577,0,0.928735856063958,0,0.118306800039844,0.168584690078102,0,0,0.217879444092406,0,0.134831308160164,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0.768251997860379,0,0.100528972411631,0.0925884451585296,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17587489739202,0.425325291727159,0,0,1.15014803749563,0,0,0,0,0,0,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0.1466765716419,0.129271715757778,0,0.845302752556,0.26593811658487,0,0,1.41849132023278,0.532844358032199,0.857867961948885,0,0,0,1.06617584622764,0,0.301439377059586,0,0,0,0,0,0.479249710983165,0,0,1.30303176000821,0.61642896765115,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0.415941723061614,2.49800584316026,1.10391690523754,0.35142424497814,0.300946099727719,0,0,0,0.184369168541703,0,0,0.343143423810856,0,0,0,0,0,0.30239029332968,0,0.460385919864187,0.561320188866147,0.128139149255701,1.02341449813341,0.965123526861645,0,0.462629081407967,0,0.164254312027618,0,0.232420756919918,0,0.200506470303285,0.0920809889358963,0.918515585316854,0.182091168006717,0.786746489756545,0,0.231046011313244,0,0,0.105551628892876,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0.154048617114644,0.15350367472613,0.413509717453592,0,0.435050081742686,0.0852266274161009,0.178064071293475,0.495854746082934,0.192190067365106,0,0,0,0.62962469366128,0.6970372701606,0.308033580176089,0,0,0,1.86062352764589,0,0,0,0,0.855877976067841,0.318203247925937,0,0.359744915166629,0.54907405947211,1.06031162111118,0.202182481573316,1.58510321173008,0,0,1.21856744815642,1.05650146756755,0,0.707027159768564,1.13008116620243,0,3.98063385144732,4.38450885253763,0,0,0,0.30982349809975,0.281695602532241,0.143411352204052,0,0,0,2.74439925886963,1.31717957183961,0,0,0.288666338176536,0.670302275535787,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0.270455678475983,0,0,0,0.439524537815682,0,0,0,0.71623345421307,0,0,0,0.140669416410513,0.111308705022906,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0.331737779793674,0,0.87754158861589,0,0,0,0,0.46112780877612,0.359030577639089,0,2.23300811812344,0.732780747214898,5.86338253620498,0,0,0,0,0,0,0,0.158936578980379,0.210998064528027,0,0,0,0,0,0,0,0,0.104421949505455,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0.189559738885464,0,0.207376382794494,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0.0967563312890851,0.365446585430928,0.0821154570532092,0,0,0.225980740780532,0,0.19871461170299,0.0633107959558787,0,0,0.640358984218058,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0.273810757783986,0,0.429765441419957,0,0.558564802544508,0,0.717873024576814,0.599037001496973,0,0,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,0,0.160753148465019,0,0.415440338029185,0,0,0.0607495566580247,0,0.0788057072991982,0.262272940674991,0,0,0,0.714695326373367,1.32418394073086,0,0,1.72844298240254,0.979762080328227,0,0,0.851940108927109,0,0,0,0,0.52893040697076,0,0,0,1.72924735609633,1.24271716604159,0,0,0,0,0,0.2506898940227,0,0,0,0.886068179966986,0.122026264901963,0,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0.934853239388898,0,0.947015026375446,0.754703705257725,0.889811221596536,1.37304041038154,0.756154618816195,0.466311601748341,0.147855149989634,0,0,0.465788870628778,0,0.265841714557995,0.521745061811734,0.150257608997218,0,0,0.181848659202559,0.107410557042488,0,0,0,0.343395705182793,0,0,0,0,0,0,0.231522474323834,0,0.179088841081487,0,0,0.176689145945881,0.192914038270915,0,0,0,0.607719912354764,0.138258436151731,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0.127894371303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| ||
|short_description=p@chr21:28216667..28216680,- | |||
}} | }} |
Latest revision as of 17:06, 28 July 2015
Short description: | p@chr21:28216667..28216680, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:28216667..28216680, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 6.26e-15 | 5 |
GAG secreting cell | 1.23e-12 | 9 |
carbohydrate secreting cell | 1.23e-12 | 9 |
adipocyte of breast | 1.84e-10 | 2 |
smooth muscle cell of the internal thoracic artery | 1.55e-09 | 2 |
extracellular matrix secreting cell | 1.84e-07 | 15 |
chorionic membrane mesenchymal stem cell | 1.93e-07 | 3 |
chondroblast | 2.23e-07 | 6 |
chondrocyte | 2.23e-07 | 6 |
adipocyte of omentum tissue | 2.98e-07 | 3 |
synovial cell | 3.48e-07 | 3 |
stromal cell | 4.37e-07 | 28 |
fibrocyte | 6.17e-07 | 3 |
tendon cell | 6.17e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
thoracic segment blood vessel | 6.26e-15 | 5 |
subclavian artery | 6.26e-15 | 5 |
trunk blood vessel | 1.08e-10 | 7 |
internal thoracic artery | 1.55e-09 | 2 |
cavity lining | 2.26e-09 | 12 |
serous membrane | 2.26e-09 | 12 |
systemic artery | 1.52e-07 | 33 |
systemic arterial system | 1.52e-07 | 33 |
organ component layer | 1.84e-07 | 66 |
egg chorion | 1.93e-07 | 3 |
omentum | 2.44e-07 | 6 |
peritoneum | 2.44e-07 | 6 |
abdominal cavity | 2.44e-07 | 6 |
visceral peritoneum | 2.44e-07 | 6 |
stratified squamous epithelium | 3.48e-07 | 3 |
layer of synovial tissue | 3.48e-07 | 3 |
synovial joint | 3.48e-07 | 3 |
synovial membrane of synovial joint | 3.48e-07 | 3 |
artery | 4.01e-07 | 42 |
arterial blood vessel | 4.01e-07 | 42 |
arterial system | 4.01e-07 | 42 |
dense regular connective tissue | 6.17e-07 | 3 |
tendon | 6.17e-07 | 3 |
regular connective tissue | 6.17e-07 | 3 |