FFCP PHASE1:Hg19::chr22:26878129..26878141,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:26878129..26878141,- to FFCP PHASE1:Hg19::chr22:26878129..26878141,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=89781 | |EntrezGene=89781 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=15844 | |HGNC=15844 | ||
|TSSclassifier=strong | |||
|UniProt=Q6P1K3 | |UniProt=Q6P1K3 | ||
|association_with_transcript=-11bp_to_BC065030_5end | |||
|cluster_id=chr22:26878129..26878141,- | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_12_at_HPS4_5end | |||
|id=chr22:26878129..26878141,- | |||
|ontology_enrichment_celltype=CL:0000147!5.53e-13!14;CL:0000148!9.17e-12!10;CL:0000541!9.17e-12!10;CL:0002274!1.79e-10!5;CL:0000457!1.79e-10!5;CL:0002191!1.79e-10!5;CL:0000097!1.79e-10!5;CL:0000831!1.79e-10!5;CL:0002028!1.79e-10!5;CL:0002567!2.14e-08!3;CL:0002619!3.09e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000148;3.17e-51;10!CL:0000147;1.86e-36;14!CL:0002567;2.54e-32;3!CL:0000710;2.31e-25;20!CL:0000075;1.23e-18;27!CL:0002077;2.35e-17;34!CL:0002566;4.06e-12;1!CL:0000817;1.39e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.73e-51,10;CL:0000541,2.73e-51,10;CL:0000147,1.67e-36,14;CL:0002567,2.41e-32,3;CL:0000710,2.15e-25,20;CL:0002077,5.43e-19,34;CL:0000075,1.17e-18,27;CL:0002566,4.06e-12,1;CL:0000333,1.78e-11,41;CL:0000221,3.15e-08,72;CL:0000133,6.95e-08,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;5.12e-22;2!DOID:3371;5.05e-12;1!DOID:4549;5.05e-12;1!DOID:5861;5.05e-12;1!DOID:6496;5.05e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.93e-22,2;DOID:3371,4.53e-12,1;DOID:4549,4.53e-12,1;DOID:5861,4.53e-12,1;DOID:6496,4.53e-12,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;8.13e-07;15!UBERON:0007376;8.13e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,7.97e-07,15;UBERON:0007376,7.97e-07,15;UBERON:0007383,7.97e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0.223915474239924,0.32389366601898,0.257575567634187,0,0,0.242584061187816,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,1.53316637465883,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20731549707325,0,0,0,1.1240175325762,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0,0.297262324577456,0,0,0,0,0,0,0.492663237895943,0.088048434013226,0.414656231081544,0.144119953416961,0.12624243342638,5.14332943766569,4.20187268114105,12.8939191931052,1.71072446022705,2.46785982487976,4.50514586765876,11.4330573052231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0.328014645699706,0.650756789328606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.298422916788,7.11418433484141,0.478278818186467,0,0,0,0,0,0,0,0,0.169291777801603,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0.709163045303809,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0,0,0,0.0897576444097721,0.108647371922008,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,3.02944095638928,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0.0730893170861856,0,0,4.76583084134101,0,0,0,0.0633107959558787,0,0,0,0,0,0.229073192331831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0.122026264901963,0.1251909307065,0,0,0,0,0.124980407962107,1.81978941049977,10.8476826747088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05040537003259,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0.397901550322736,0,0.22589216407792,0.109940516745429,0,0,0,0.940634592723046,0,0,0,0.297046400327086,0.4226557275834,0.169927114687817,0.0939839179798536,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0.380095503034311,0,0,0,0,0.0757786982182394,0,0,0,0,0.23806443146374,0.387533459016037,0.434523000071005,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0.223915474239924,0.32389366601898,0.257575567634187,0,0,0.242584061187816,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,1.53316637465883,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20731549707325,0,0,0,1.1240175325762,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0,0.297262324577456,0,0,0,0,0,0,0.492663237895943,0.088048434013226,0.414656231081544,0.144119953416961,0.12624243342638,5.14332943766569,4.20187268114105,12.8939191931052,1.71072446022705,2.46785982487976,4.50514586765876,11.4330573052231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0.328014645699706,0.650756789328606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.298422916788,7.11418433484141,0.478278818186467,0,0,0,0,0,0,0,0,0.169291777801603,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0.709163045303809,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0,0,0,0.0897576444097721,0.108647371922008,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,3.02944095638928,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0.0730893170861856,0,0,4.76583084134101,0,0,0,0.0633107959558787,0,0,0,0,0,0.229073192331831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0.122026264901963,0.1251909307065,0,0,0,0,0.124980407962107,1.81978941049977,10.8476826747088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05040537003259,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0.397901550322736,0,0.22589216407792,0.109940516745429,0,0,0,0.940634592723046,0,0,0,0.297046400327086,0.4226557275834,0.169927114687817,0.0939839179798536,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0.380095503034311,0,0,0,0,0.0757786982182394,0,0,0,0,0.23806443146374,0.387533459016037,0.434523000071005,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p12@HPS4 | |||
}} | }} |
Latest revision as of 12:50, 19 September 2015
Short description: | p12@HPS4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_HPS4_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | -11bp_to_BC065030_5end |
EntrezGene: | HPS4 |
HGNC: | 15844 |
UniProt: | Q6P1K3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.73e-51 | 10 |
melanoblast | 2.73e-51 | 10 |
pigment cell | 1.67e-36 | 14 |
light melanocyte | 2.41e-32 | 3 |
neurecto-epithelial cell | 2.15e-25 | 20 |
ecto-epithelial cell | 5.43e-19 | 34 |
columnar/cuboidal epithelial cell | 1.17e-18 | 27 |
dark melanocyte | 4.06e-12 | 1 |
migratory neural crest cell | 1.78e-11 | 41 |
ectodermal cell | 3.15e-08 | 72 |
neurectodermal cell | 6.95e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 7.97e-07 | 15 |
outer epithelium | 7.97e-07 | 15 |
enveloping layer of ectoderm | 7.97e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.93e-22 | 2 |
chondrosarcoma | 4.53e-12 | 1 |
extraosseous chondrosarcoma | 4.53e-12 | 1 |
myxoid chondrosarcoma | 4.53e-12 | 1 |
extraskeletal myxoid chondrosarcoma | 4.53e-12 | 1 |