FFCP PHASE1:Hg19::chr22:38092989..38093004,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:38092989..38093004,+ to FFCP PHASE1:Hg19::chr22:38092989..38093004,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11078 | |EntrezGene=11078 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17009 | |HGNC=17009 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H2D6 | |UniProt=Q9H2D6 | ||
|association_with_transcript=0bp_to_NM_001039141,uc003atr.2_5end | |||
|cluster_id=chr22:38092989..38093004,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_6_at_TRIOBP_5end | |||
|id=chr22:38092989..38093004,+ | |||
|ontology_enrichment_celltype=CL:0002319!1.66e-14!25;CL:0000047!7.43e-11!8;CL:0000133!1.01e-10!59;CL:0000055!2.88e-10!180;CL:0000540!1.89e-08!6;CL:0000031!1.89e-08!6;CL:0000404!1.89e-08!6;CL:0000221!4.08e-08!71;CL:0002322!3.60e-07!5;CL:0000243!6.81e-07!15;CL:0000125!6.81e-07!15;CL:0000030!6.81e-07!15;CL:0000339!6.81e-07!15;CL:0000095!7.33e-07!17;CL:0000123!7.33e-07!17 | |||
|ontology_enrichment_celltype_v019=CL:0000540;7.60e-21;6!CL:0000404;7.60e-21;6!CL:0002319;3.86e-17;25!CL:0000047;1.66e-16;2!CL:0002032;6.46e-09;1!CL:0000228;6.46e-09;1!CL:0000557;6.46e-09;1!CL:0002372;6.46e-09;1!CL:0002321;2.38e-08;15!CL:0002322;4.29e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,4.19e-34,8;CL:0000540,8.24e-21,6;CL:0000031,8.24e-21,6;CL:0000404,8.24e-21,6;CL:0002319,3.78e-17,25;CL:0000228,4.91e-09,1;CL:0002372,4.91e-09,1;CL:0000133,7.81e-09,59;CL:0002322,3.68e-07,5;CL:0000221,4.77e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000031;7.60e-21;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.94e-15!94;UBERON:0001016!2.94e-15!94;UBERON:0005743!1.56e-13!86;UBERON:0001017!4.83e-13!82;UBERON:0004121!3.00e-10!169;UBERON:0000924!3.31e-10!173;UBERON:0006601!3.31e-10!173;UBERON:0003075!6.30e-09!86;UBERON:0007284!6.30e-09!86;UBERON:0002346!9.08e-09!90;UBERON:0001049!3.81e-08!57;UBERON:0005068!3.81e-08!57;UBERON:0006241!3.81e-08!57;UBERON:0007135!3.81e-08!57;UBERON:0000955!1.12e-07!69;UBERON:0006238!1.12e-07!69;UBERON:0000033!4.81e-07!123;UBERON:0003076!8.46e-07!15;UBERON:0003057!8.46e-07!15;UBERON:0000475!9.84e-07!365;UBERON:0000153!9.85e-07!129;UBERON:0007811!9.85e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0005795;6.46e-09;1!UBERON:0000922;7.35e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.16e-12,89;UBERON:0001017,2.07e-11,81 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0.984968464614303,0.204000691244253,1.25381888591235,1.71741592278634,0.547497700291537,0.125542639594803,0.152826811495903,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.472674085820339,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267899184852239,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0.24666754841716,0,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0.647491777472526,0,0,0.368502951935304,0.103325781175765,0,0,0,0,0.168336113954066,0.375355559615893,0.277064115484183,0,0,0,0,0.179389635688862,0,0.423863802319124,0,0.103052529238439,0.515281080091258,0,0.168776332241266,0.0974370051611986,0.757301322732344,0.0920498986422993,0,0,0,0,0,0,0,1.46368447355514,2.12047629314376,0.813357600086629,0.518305275076852,0.756962552626885,1.09493207722749,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.219500570817251,0,0,0,0,0,1.44331342025273,0.811512834825538,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0.205476322550383,0.179060963239896,0,0,0,0,1.01637849688985,3.90419561572865,2.31986643833309,3.01529277601828,1.27587750330633,0,0,0,0,0,0,0.207970861530807,0,0,0,0.300946099727719,0,0,0,0.553107505625109,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0.902399225814824,0.231046011313244,0,0,0,0,0.510281115829547,0.215915916102139,0,0.541892875087706,0,0,0.831076008928724,0,0,0,0,0.328014645699706,0,0,0,0.082509499920588,0,0,0,0.096670718292122,0,0,0.137836572484531,0.107420244868274,0,0,0.0890320356467374,0,0.384380134730212,0,0,0,0.94443704049192,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0.636406495851874,0,0.179872457583315,0.274537029736055,0.353437207037059,0,0,0,0.48763373908959,0,0,0,0,0,0.551365343546124,0.66343897524122,0.438450885253763,0,0,0.405820753925408,0,0.845086807596724,0,0.0982490410131212,0.7133421029625,0.354761064070598,0,0,0,0.699869440489966,0,0,1.08890984861323,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0.432807638929335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0.281338832821026,0,0,0.844501632511974,0,0,0,0,0.615424027305347,0.933118762985422,0,0,0,0,0,0,0,0,11.9768278800717,0,0,0,0.1137934482855,0,0,0.344743373241465,1.16641845353302,0.694499979733169,0,0.361789315876224,0,0.331737779793674,0.591095237907095,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0.649165919226273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2429104652196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90392296312213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0.288950589901519,0,0,1.27746588066972,0,0.525774708558629,0,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0.136203406111576,1.12527203925513,0.825236619583403,0.415440338029185,0,0,0.242998226632099,0,0,0.0524545881349981,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0.1251909307065,0,0.221858103073705,0.0620964029413835,0.276697269872462,0.249960815924213,0,0,0,0,0.144921028610825,0,0,0,0.189403005275089,0,0,0,0,0.15543720058278,0,0,0,0.310525913752519,0,0,0.521745061811734,1.05180326298053,0.380805212168795,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0.389720617678777,0,0.163565394255844,0,0,0,0,0,0,0.567515953566836,0.184105950251841,0,0,0.76736622782191,0.539124056983409,0.157265941855896,1.20130602011215,0.509197589862076,0,0,0,0,0.157723490002507,0.80057074828547,0,0,0.0642292250964595,0,0,0,16.8888036468551,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.126831620387814,10.3925213713462,0,0,0,0,0,0.672567444437648,0,0,0.0887023701626388,0,0,0.203909198930495,0.0657727735628491,0,0,0,0,0,0,0.215927591218621,0,0.285906176706625,0.158013611732727,0,0.173858272302579,0,0,0,0,0,0,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0.439762066981716,0,0,0,0,0,0,0.196308467114945,0,0.8453114551668,0,0,0,0.0999411559249289,0,0,0,0,0,0,0.315543124386369,0.0679914901909147,11.7814686391902,0,0.371995018166751,0,0,1.00933139868063,0.437062287854782,0,0.101988829741982,0.26721740526556,0,0.250707539292375,0,0,0,0,0.639701945702943,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,3.8614456457388,0,0,0.122241444182866,1.62758471326295,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0.984968464614303,0.204000691244253,1.25381888591235,1.71741592278634,0.547497700291537,0.125542639594803,0.152826811495903,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.472674085820339,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267899184852239,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0.24666754841716,0,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0.647491777472526,0,0,0.368502951935304,0.103325781175765,0,0,0,0,0.168336113954066,0.375355559615893,0.277064115484183,0,0,0,0,0.179389635688862,0,0.423863802319124,0,0.103052529238439,0.515281080091258,0,0.168776332241266,0.0974370051611986,0.757301322732344,0.0920498986422993,0,0,0,0,0,0,0,1.46368447355514,2.12047629314376,0.813357600086629,0.518305275076852,0.756962552626885,1.09493207722749,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.219500570817251,0,0,0,0,0,1.44331342025273,0.811512834825538,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0.205476322550383,0.179060963239896,0,0,0,0,1.01637849688985,3.90419561572865,2.31986643833309,3.01529277601828,1.27587750330633,0,0,0,0,0,0,0.207970861530807,0,0,0,0.300946099727719,0,0,0,0.553107505625109,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0.902399225814824,0.231046011313244,0,0,0,0,0.510281115829547,0.215915916102139,0,0.541892875087706,0,0,0.831076008928724,0,0,0,0,0.328014645699706,0,0,0,0.082509499920588,0,0,0,0.096670718292122,0,0,0.137836572484531,0.107420244868274,0,0,0.0890320356467374,0,0.384380134730212,0,0,0,0.94443704049192,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0.636406495851874,0,0.179872457583315,0.274537029736055,0.353437207037059,0,0,0,0.48763373908959,0,0,0,0,0,0.551365343546124,0.66343897524122,0.438450885253763,0,0,0.405820753925408,0,0.845086807596724,0,0.0982490410131212,0.7133421029625,0.354761064070598,0,0,0,0.699869440489966,0,0,1.08890984861323,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0.432807638929335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0.281338832821026,0,0,0.844501632511974,0,0,0,0,0.615424027305347,0.933118762985422,0,0,0,0,0,0,0,0,11.9768278800717,0,0,0,0.1137934482855,0,0,0.344743373241465,1.16641845353302,0.694499979733169,0,0.361789315876224,0,0.331737779793674,0.591095237907095,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0.649165919226273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2429104652196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90392296312213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0.288950589901519,0,0,1.27746588066972,0,0.525774708558629,0,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0.136203406111576,1.12527203925513,0.825236619583403,0.415440338029185,0,0,0.242998226632099,0,0,0.0524545881349981,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0.1251909307065,0,0.221858103073705,0.0620964029413835,0.276697269872462,0.249960815924213,0,0,0,0,0.144921028610825,0,0,0,0.189403005275089,0,0,0,0,0.15543720058278,0,0,0,0.310525913752519,0,0,0.521745061811734,1.05180326298053,0.380805212168795,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0.389720617678777,0,0.163565394255844,0,0,0,0,0,0,0.567515953566836,0.184105950251841,0,0,0.76736622782191,0.539124056983409,0.157265941855896,1.20130602011215,0.509197589862076,0,0,0,0,0.157723490002507,0.80057074828547,0,0,0.0642292250964595,0,0,0,16.8888036468551,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.126831620387814,10.3925213713462,0,0,0,0,0,0.672567444437648,0,0,0.0887023701626388,0,0,0.203909198930495,0.0657727735628491,0,0,0,0,0,0,0.215927591218621,0,0.285906176706625,0.158013611732727,0,0.173858272302579,0,0,0,0,0,0,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0.439762066981716,0,0,0,0,0,0,0.196308467114945,0,0.8453114551668,0,0,0,0.0999411559249289,0,0,0,0,0,0,0.315543124386369,0.0679914901909147,11.7814686391902,0,0.371995018166751,0,0,1.00933139868063,0.437062287854782,0,0.101988829741982,0.26721740526556,0,0.250707539292375,0,0,0,0,0.639701945702943,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,3.8614456457388,0,0,0.122241444182866,1.62758471326295,0,0,0.320568492303233 | ||
|short_description=p6@TRIOBP | |||
}} | }} |
Latest revision as of 06:08, 20 September 2015
Short description: | p6@TRIOBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TRIOBP_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_NM_001039141, uc003atr.2_5end |
EntrezGene: | TRIOBP |
HGNC: | 17009 |
UniProt: | Q9H2D6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 4.19e-34 | 8 |
neuron | 8.24e-21 | 6 |
neuroblast | 8.24e-21 | 6 |
electrically signaling cell | 8.24e-21 | 6 |
neural cell | 3.78e-17 | 25 |
multinucleate cell | 4.91e-09 | 1 |
myotube | 4.91e-09 | 1 |
neurectodermal cell | 7.81e-09 | 59 |
embryonic stem cell | 3.68e-07 | 5 |
ectodermal cell | 4.77e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
nervous system | 6.16e-12 | 89 |
central nervous system | 2.07e-11 | 81 |