FFCP PHASE1:Hg19::chr2:216242889..216242900,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr2:216242889..216242900,+ to FFCP PHASE1:Hg19::chr2:216242889..216242900,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:216242889..216242900,+ | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_at_chr2:216242889..216242900,+ | |||
|id=chr2:216242889..216242900,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.79e-20!180;CL:0000057!4.48e-17!75;CL:0002371!5.68e-16!591;CL:0002334!9.44e-14!12;CL:0000144!1.12e-13!625;CL:0000048!8.48e-13!430;CL:0000723!1.35e-12!436;CL:0000034!1.14e-11!444;CL:0002620!2.58e-10!23;CL:0000548!1.04e-09!679;CL:0000004!1.04e-09!679;CL:0000255!1.04e-09!679;CL:0000012!1.98e-09!682;CL:0000680!3.74e-09!57;CL:0000056!3.74e-09!57;CL:0000355!3.74e-09!57;CL:0000183!1.74e-08!59;CL:0000187!1.13e-07!54;CL:0002320!1.57e-07!365;CL:0000188!3.87e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.22e-31;12!CL:0002580;7.47e-10;3!CL:0002579;5.24e-09;3!CL:0002582;7.80e-09;3!CL:0000197;2.46e-08;6!CL:0000098;2.46e-08;6!CL:0002167;2.46e-08;6!CL:0002561;3.82e-07;2!CL:0000188;4.01e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,1.13e-31,12;CL:0000057,4.17e-15,76;CL:0002580,7.32e-10,3;CL:0002579,5.98e-09,3;CL:0002582,9.02e-09,3;CL:0000048,1.08e-08,427;CL:0000723,2.18e-08,433;CL:0000197,2.57e-08,6;CL:0000098,2.57e-08,6;CL:0002167,2.57e-08,6;CL:0000034,5.41e-08,441;CL:0002561,3.36e-07,2;CL:0000188,5.40e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.30e-09!83;UBERON:0002329!1.30e-09!83;UBERON:0003077!1.30e-09!83;UBERON:0003059!1.30e-09!83;UBERON:0007282!1.30e-09!83;UBERON:0009618!1.30e-09!83;UBERON:0007285!1.30e-09!83;UBERON:0004290!3.64e-09!70;UBERON:0002199!1.83e-08!45;UBERON:0002416!1.83e-08!45;UBERON:0004923!3.12e-08!57;UBERON:0002385!5.03e-08!63;UBERON:0001015!5.03e-08!63;UBERON:0000383!5.03e-08!63;UBERON:0001134!5.80e-08!61;UBERON:0002036!5.80e-08!61;UBERON:0003082!5.80e-08!61;UBERON:0002384!9.18e-08!375;UBERON:0000486!9.91e-08!82;UBERON:0005256!1.33e-07!143;UBERON:0002097!1.50e-07!40;UBERON:0003688!4.90e-07!6;UBERON:0002358!4.90e-07!6;UBERON:0003684!4.90e-07!6;UBERON:0001178!4.90e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;6.53e-11;9!UBERON:0000042;6.53e-11;9!UBERON:0003688;6.48e-08;6!UBERON:0002358;6.48e-08;6!UBERON:0003684;6.48e-08;6!UBERON:0001178;6.48e-08;6!UBERON:0005933;3.82e-07;2!UBERON:0005942;3.82e-07;2!UBERON:0005932;3.82e-07;2!UBERON:0005406;4.17e-07;2!UBERON:0000310;5.49e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004457,6.82e-08,12;UBERON:0000042,6.82e-08,12;UBERON:0003688,7.09e-08,6;UBERON:0002358,7.09e-08,6;UBERON:0003684,7.09e-08,6;UBERON:0001178,7.09e-08,6;UBERON:0005933,3.36e-07,2;UBERON:0005942,3.36e-07,2;UBERON:0005932,3.36e-07,2;UBERON:0000310,3.53e-07,10;UBERON:0005406,3.79e-07,2 | |||
|phase1_expression=1.63510541343501,1.92690471501885,0.986680828671798,7.00513088471913,0.446961094427288,2.61701557230111,0,0,0.261185628199839,0,0,0.873765488520689,0.263766978228454,0.495065411840187,0.662794751455832,0,0,0,0,0,0,0.626909442956176,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,1.66221330396589,0.361439152384566,0.50133791063589,1.30361867064741,0,8.27279279514481,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0.838998872419812,1.37559020970034,0,0.258416759169329,0,0,0,0,0.24406205754817,0,1.62028389576352,0,0,0,0,0,0,0,0,0,5.96366342034382,0.886413581652058,1.58891016975863,0.860509862246441,1.41867352879343,0.560677600142307,0,3.94668077467456,0,0.942974704487816,0,0,0,0,2.18512053781224,0,0.896692083310806,0.23486899728753,0,0.140450806702248,0,0.61417158655884,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0,0,0.680593098960126,1.79389635688862,0.85422955527427,0.635795703478686,0.900273288253207,0.309157587715317,3.34932702059318,0.18611685633159,3.20675031258406,0.68205903612839,5.3011092591264,1.01254888506529,0.484938170456436,3.19508633264953,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,3.21620469096443,0,6.96551892047969,2.88751792667834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.98775256867763,0,0,0,0,0,0,0,0.234817388471643,0.144366447761074,0,0.761016608938393,0,0,0,0,0,0,0.16798212819886,0.141775097242386,1.07470227243418,0,0,0,0,0,0,0,0,0,0,0,0.308482478109971,0,0,0.112131084345361,0,0.07333828582095,0.775630294546667,0,0,0.531876233169741,0,0.514414748524284,1.41849132023278,0.266422179016099,0.428933980974443,0.542621605391443,0,0.325736184293735,0,0,0,0,0,0,0,0,0.958499421966331,1.14861935834114,0,0.723906533337896,1.02738161275192,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,1.50051156317903,0.542530047399471,4.99130067673937,6.95873056308931,2.20783381047509,2.22568688486155,0,0,1.03473071292505,0,0.368738337083406,0.521301686808497,0,0.686286847621712,0,0,0,0,0,0.907170879989041,2.23297027036899,4.45039722535381,4.77122160536225,1.15325234330131,1.53512174720011,4.02134802859019,5.93672265779964,1.23367755042124,1.77561725313127,1.23190734020714,2.07701771673448,1.51073491997947,0,3.60911646545913,0,0.229628896329213,0.182091168006717,0.393373244878272,0.451199612907412,0.0770153371044148,0,0,0.105551628892876,0,0,0.431831832204279,0,0.812839312631559,0.501689773854853,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,1.45006077438183,1.07834031980251,1.07452572308291,0.551346289938122,1.28904293841928,1.59518363305651,0.852266274161009,0.890320356467374,0.495854746082934,0.384380134730212,0.382838137483752,0.30347334256665,0,1.88887408098384,0,0.308033580176089,0,0,0,0.143124886741991,1.116475108079,1.58189712359363,0.38126038784765,0,0,0.636406495851874,0,0.179872457583315,0,0.353437207037059,0,0,0,0,0.731140468893853,0,0,0.565621727814851,1.13008116620243,0,1.32687795048244,0,0.578775534266688,1.9676842561399,0.202910376962704,0,0.281695602532241,0.286822704408103,0.687743287091848,0,0,1.05553817648832,2.96365403663912,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19372242368845,0,0.614321404198464,0,0,2.11486539543521,0,0,0.796991953004279,0,0,0,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,5.74202087517455,0.457987967009312,18.6562171606522,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0.274083849293502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44119953416961,0,0.157566364614447,0.0824158583811665,0.13480708770837,0.590564889088493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0.542999601753713,0,0.653174720218818,0,0,0.170388021785422,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0.447764408660622,1.16856654923612,1.66441758450784,1.13641803165053,1.76097531226803,0.889811221596536,0.457680136793847,2.57092570397506,0.15543720058278,0.147855149989634,0,0,0,0.414706207840855,1.32920857278997,1.5652351854352,0,0.380805212168795,0.813741466409323,0.181848659202559,0.537052785212442,0,0.796191777397232,0,0.686791410365586,0.336749488765919,0,0,0,0,0,0,0,0.537266523244462,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471797825567689,0,0,0,0.371807292777007,0,0.636008701306837,0,0,0.705351887381368,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0.0752103283492573,3.42898616795984,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0.22910686854405,0.31020638566432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| ||
|short_description=p@chr2:216242889..216242900,+ | |||
}} | }} |
Latest revision as of 06:02, 29 July 2015
Short description: | p@chr2:216242889..216242900, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:216242889..216242900, + |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 1.13e-31 | 12 |
fibroblast | 4.17e-15 | 76 |
preadipocyte of the breast | 7.32e-10 | 3 |
omentum preadipocyte | 5.98e-09 | 3 |
visceral preadipocyte | 9.02e-09 | 3 |
multi fate stem cell | 1.08e-08 | 427 |
somatic stem cell | 2.18e-08 | 433 |
receptor cell | 2.57e-08 | 6 |
sensory epithelial cell | 2.57e-08 | 6 |
olfactory epithelial cell | 2.57e-08 | 6 |
stem cell | 5.41e-08 | 441 |
outer root sheath cell | 3.36e-07 | 2 |
cell of skeletal muscle | 5.40e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cavity lining | 6.82e-08 | 12 |
serous membrane | 6.82e-08 | 12 |
omentum | 7.09e-08 | 6 |
peritoneum | 7.09e-08 | 6 |
abdominal cavity | 7.09e-08 | 6 |
visceral peritoneum | 7.09e-08 | 6 |
hair root sheath | 3.36e-07 | 2 |
hair outer root sheath | 3.36e-07 | 2 |
bulb of hair follicle | 3.36e-07 | 2 |
breast | 3.53e-07 | 10 |
perirenal fat | 3.79e-07 | 2 |