FFCP PHASE1:Hg19::chr2:3622932..3622954,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:3622932..3622954,+ to FFCP PHASE1:Hg19::chr2:3622932..3622954,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6201 | |EntrezGene=6201 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10440 | |HGNC=10440 | ||
|TSSclassifier=strong | |||
|UniProt=P62081 | |UniProt=P62081 | ||
|association_with_transcript=0bp_to_ENST00000406376,ENST00000481006,ENST00000491937_5end | |||
|cluster_id=chr2:3622932..3622954,+ | |||
|description=CAGE_peak_3_at_RPS7_5end | |||
|id=chr2:3622932..3622954,+ | |||
|ontology_enrichment_celltype=CL:0000012!4.13e-32!682;CL:0000548!4.59e-32!679;CL:0000004!4.59e-32!679;CL:0000255!4.59e-32!679;CL:0000003!2.18e-21!722;CL:0000144!4.73e-17!625;CL:0002321!1.03e-16!248;CL:0000220!1.45e-16!246;CL:0000063!3.54e-15!578;CL:0000066!4.11e-13!254;CL:0002371!1.89e-12!591;CL:0000222!3.21e-10!119;CL:0000076!9.80e-10!62;CL:0000359!1.17e-07!32;CL:0000223!1.30e-07!59;CL:0000393!2.34e-07!60;CL:0000211!2.34e-07!60;CL:0000034!3.78e-07!444;CL:0000723!7.48e-07!436;CL:0000680!8.34e-07!57;CL:0000056!8.34e-07!57;CL:0000355!8.34e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.60e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.99e-16,250;CL:0000066,3.11e-13,253;CL:0000222,6.91e-10,121;CL:0000076,1.67e-09,63;CL:0000223,8.12e-08,58;CL:0000359,1.17e-07,32;CL:0000393,4.31e-07,61;CL:0000211,4.31e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.97e-24!235;DOID:14566!7.30e-24!239;DOID:0050686!1.14e-15!137;DOID:305!1.93e-11!106;DOID:2531!1.09e-10!51;DOID:0060083!1.09e-10!51;DOID:0050687!2.67e-10!143;DOID:1240!1.07e-08!39;DOID:8692!3.45e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;3.00e-07;39!DOID:8692;5.96e-07;31!DOID:2531;9.40e-07;51!DOID:0060083;9.40e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.02e-24,235;DOID:14566,7.49e-24,239;DOID:0050686,1.13e-15,137;DOID:305,2.12e-11,106;DOID:2531,1.08e-10,51;DOID:0060083,1.08e-10,51;DOID:0050687,2.74e-10,143;DOID:1240,1.06e-08,39;DOID:8692,3.43e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0000490!1.37e-09!138;UBERON:0001637!6.17e-09!42;UBERON:0003509!6.17e-09!42;UBERON:0004572!6.17e-09!42;UBERON:0001981!2.06e-08!60;UBERON:0007500!2.06e-08!60;UBERON:0004537!2.06e-08!60;UBERON:0006965!2.06e-08!60;UBERON:0002049!2.78e-08!79;UBERON:0007798!2.78e-08!79;UBERON:0000055!2.84e-08!69;UBERON:0004872!7.58e-07!84;UBERON:0003104!7.61e-07!238;UBERON:0009142!7.61e-07!238 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,1.76e-10,148;UBERON:0001637,6.84e-09,42;UBERON:0003509,6.84e-09,42;UBERON:0004572,6.84e-09,42;UBERON:0007500,9.10e-09,59;UBERON:0001981,9.10e-09,59;UBERON:0004537,9.10e-09,59;UBERON:0006965,9.10e-09,59;UBERON:0000055,1.36e-08,68;UBERON:0002049,1.44e-08,78;UBERON:0007798,1.44e-08,78;UBERON:0002100,3.15e-07,199;UBERON:0004872,4.41e-07,83 | |||
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| ||
|short_description=p3@RPS7 | |||
}} | }} |
Latest revision as of 00:50, 17 September 2015
Short description: | p3@RPS7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RPS7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000406376, ENST00000481006, ENST00000491937_5end |
EntrezGene: | RPS7 |
HGNC: | 10440 |
UniProt: | P62081 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.99e-16 | 250 |
epithelial cell | 3.11e-13 | 253 |
mesodermal cell | 6.91e-10 | 121 |
squamous epithelial cell | 1.67e-09 | 63 |
endodermal cell | 8.12e-08 | 58 |
vascular associated smooth muscle cell | 1.17e-07 | 32 |
electrically responsive cell | 4.31e-07 | 61 |
electrically active cell | 4.31e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
unilaminar epithelium | 1.76e-10 | 148 |
artery | 6.84e-09 | 42 |
arterial blood vessel | 6.84e-09 | 42 |
arterial system | 6.84e-09 | 42 |
epithelial tube open at both ends | 9.10e-09 | 59 |
blood vessel | 9.10e-09 | 59 |
blood vasculature | 9.10e-09 | 59 |
vascular cord | 9.10e-09 | 59 |
vessel | 1.36e-08 | 68 |
vasculature | 1.44e-08 | 78 |
vascular system | 1.44e-08 | 78 |
trunk | 3.15e-07 | 199 |
splanchnic layer of lateral plate mesoderm | 4.41e-07 | 83 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.02e-24 | 235 |
disease of cellular proliferation | 7.49e-24 | 239 |
organ system cancer | 1.13e-15 | 137 |
carcinoma | 2.12e-11 | 106 |
hematologic cancer | 1.08e-10 | 51 |
immune system cancer | 1.08e-10 | 51 |
cell type cancer | 2.74e-10 | 143 |
leukemia | 1.06e-08 | 39 |
myeloid leukemia | 3.43e-07 | 31 |