FFCP PHASE1:Hg19::chr2:89145640..89145676,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:89145640..89145676,+ to FFCP PHASE1:Hg19::chr2:89145640..89145676,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:89145640..89145676,+ | |||
|coexpression_cluster_id=C1692 | |||
|description=CAGE_peak_at_chr2:89145640..89145676,+ | |||
|id=chr2:89145640..89145676,+ | |||
|ontology_enrichment_celltype=CL:0000236!6.27e-76!14;CL:0000945!5.90e-59!24;CL:0000826!5.90e-59!24;CL:0000838!1.06e-29!52;CL:0000542!4.34e-29!53;CL:0000051!4.34e-29!53;CL:0000784!2.28e-23!3;CL:0000738!1.34e-17!140;CL:0000037!2.61e-15!172;CL:0000566!2.61e-15!172;CL:0002087!7.71e-15!119;CL:0000988!2.92e-14!182;CL:0002031!4.07e-14!124;CL:0002032!3.22e-11!165;CL:0000837!3.22e-11!165;CL:0000819!6.65e-09!1;CL:0001024!7.75e-09!1;CL:0000451!9.70e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000236;6.38e-111;13!CL:0000945;5.19e-60;24!CL:0000784;8.94e-25;3!CL:0000542;9.27e-21;53!CL:0000785;3.25e-19;1!CL:0000819;3.25e-19;1!CL:0000451;1.84e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,6.12e-103,14;CL:0000945,5.57e-60,24;CL:0000826,5.57e-60,24;CL:0000838,1.64e-27,52;CL:0000542,5.50e-27,53;CL:0000051,5.50e-27,53;CL:0000784,7.93e-25,3;CL:0000819,5.62e-19,1;CL:0000738,2.78e-15,136;CL:0000037,2.92e-12,168;CL:0002087,4.72e-12,115;CL:0000988,1.32e-11,177;CL:0002031,1.57e-11,120;CL:0000785,3.58e-10,2;CL:0000955,3.58e-10,2;CL:0000818,3.58e-10,2;CL:0000954,3.58e-10,2;CL:0000816,3.58e-10,2;CL:0002032,1.91e-08,161;CL:0000837,1.91e-08,161;CL:0000451,1.78e-07,10;CL:0000817,3.35e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;9.27e-21;53!CL:0000954;2.72e-10;2 | |||
|ontology_enrichment_disease=DOID:0060058!6.72e-12!10;DOID:0060073!6.65e-09!1;DOID:8675!6.65e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:0060073;3.25e-19;1!DOID:8675;3.25e-19;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,5.62e-19,1;DOID:8675,5.62e-19,1 | |||
|ontology_enrichment_uberon=UBERON:0000989!9.74e-09!1;UBERON:0008811!9.74e-09!1;UBERON:0006258!9.74e-09!1;UBERON:0005876!9.74e-09!1;UBERON:0004874!9.74e-09!1;UBERON:0002372!1.42e-08!1;UBERON:0001961!1.42e-08!1;UBERON:0001744!1.42e-08!1;UBERON:0001735!1.42e-08!1;UBERON:0002363!2.22e-08!1;UBERON:0007647!2.22e-08!1;UBERON:0010115!2.22e-08!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0.154934401160603,0,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0.546138611262131,0.889509253863555,6.82768356106412,3.2031678962881,1.72425731986345,1.32208974556972,2.86216126360609,2.84606484554724,1.17447437874188,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.715471872916026,1.14398982156026,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.094728735294,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.395223263795889,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0.154934401160603,0,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0.546138611262131,0.889509253863555,6.82768356106412,3.2031678962881,1.72425731986345,1.32208974556972,2.86216126360609,2.84606484554724,1.17447437874188,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.715471872916026,1.14398982156026,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.094728735294,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.395223263795889,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:89145640..89145676,+ | |||
}} | }} |
Latest revision as of 13:03, 29 July 2015
Short description: | p@chr2:89145640..89145676, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:89145640..89145676, + |
Coexpression cluster: | C1692_CD19_diffuse_Hodgkin_Neutrophils_Dendritic_colon_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 6.12e-103 | 14 |
lymphocyte of B lineage | 5.57e-60 | 24 |
pro-B cell | 5.57e-60 | 24 |
lymphoid lineage restricted progenitor cell | 1.64e-27 | 52 |
lymphocyte | 5.50e-27 | 53 |
common lymphoid progenitor | 5.50e-27 | 53 |
plasmacytoid dendritic cell | 7.93e-25 | 3 |
B-1 B cell | 5.62e-19 | 1 |
leukocyte | 2.78e-15 | 136 |
hematopoietic stem cell | 2.92e-12 | 168 |
nongranular leukocyte | 4.72e-12 | 115 |
hematopoietic cell | 1.32e-11 | 177 |
hematopoietic lineage restricted progenitor cell | 1.57e-11 | 120 |
mature B cell | 3.58e-10 | 2 |
pre-B-II cell | 3.58e-10 | 2 |
transitional stage B cell | 3.58e-10 | 2 |
small pre-B-II cell | 3.58e-10 | 2 |
immature B cell | 3.58e-10 | 2 |
hematopoietic oligopotent progenitor cell | 1.91e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.91e-08 | 161 |
dendritic cell | 1.78e-07 | 10 |
precursor B cell | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 5.62e-19 | 1 |
lymphosarcoma | 5.62e-19 | 1 |