FFCP PHASE1:Hg19::chr2:89156976..89157016,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=101bp_to_CU688247,CU689025,CU689831,CU689833,CU689835,CU691143_5end | |||
|cluster_id=chr2:89156976..89157016,+ | |||
|coexpression_cluster_id=C668 | |||
|description=CAGE_peak_4_at_CU688247_5end,CAGE_peak_4_at_CU689025_5end,CAGE_peak_4_at_CU689831_5end,CAGE_peak_4_at_CU689833_5end,CAGE_peak_4_at_CU689835_5end,CAGE_peak_4_at_CU691143_5end | |||
|id=chr2:89156976..89157016,+ | |||
|ontology_enrichment_celltype=CL:0000236!1.09e-33!14;CL:0000945!1.57e-31!24;CL:0000826!1.57e-31!24;CL:0000838!4.71e-12!52;CL:0000542!9.63e-12!53;CL:0000051!9.63e-12!53;CL:0000842!7.82e-08!3;CL:0000785!7.65e-07!2;CL:0000955!7.65e-07!2;CL:0000818!7.65e-07!2;CL:0000954!7.65e-07!2;CL:0000816!7.65e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000945;9.69e-49;24!CL:0000236;8.95e-47;13!CL:0000542;1.65e-14;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,3.42e-51,14;CL:0000945,6.55e-49,24;CL:0000826,6.55e-49,24;CL:0000838,2.26e-20,52;CL:0000542,6.54e-20,53;CL:0000051,6.54e-20,53;CL:0000785,1.15e-09,2;CL:0000955,1.15e-09,2;CL:0000818,1.15e-09,2;CL:0000954,1.15e-09,2;CL:0000816,1.15e-09,2;CL:0002087,5.09e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000051;1.65e-14;53!UBERON:0006965;1.15e-09;2!CL:0000954;1.45e-09;2 | |||
|ontology_enrichment_disease_v019=DOID:0060058;3.16e-10;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.95e-10,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.93e-31!115;UBERON:0000178!9.70e-13!15;UBERON:0000179!9.70e-13!15;UBERON:0000463!9.70e-13!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.90e-09;15!UBERON:0000179;1.90e-09;15!UBERON:0000463;1.90e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.09e-23,114;UBERON:0000178,2.49e-09,15;UBERON:0000179,2.49e-09,15;UBERON:0000463,2.49e-09,15 | |||
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| |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39440961044543,4.83375390457233,0,0,0,0,0.223915474239924,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.3197371122926,4.36910889009705,5.33705552318133,7.68114400619713,5.60554381850417,2.87376219977242,9.25462821898807,4.77026877267682,2.84606484554724,5.28513470433845,1.91136614062614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24430121722827,0,0,0,0,0,0.715471872916026,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,1.01489521846434,0,1.13929437434833,3.09701308095126,1.23408681925858,0,0,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18796781201712,3.86797481743607,0,0,0,0,0,0,0,3.05794557474494,2.3948309234694,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76985594558733,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9289289661776,4.33442066066362,0,0,0,0,0,0,0,1.82454789215666,0,0,0,0,0,1.5796644907122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32773639572207,0,0,0,0,0,0,0,1.92107695265417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0.429226048136571,0,0,0,0,0,0,0,0,1.18542664892098,0,0.136203406111576,0,0,0,0,0,0,0,1.26089131678717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,1.49502377594773,0,6.21358583020793,24.3121350687856,20.7492213492841,1.58330377895165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451261970095544,0,1.56302802246618,0,0,0,0,0,0,0,0,3.83780436800028,0.992422356778588,0,0,0,0,0,0,0,4.72459348978695,0,0,0,0,0,0.078493092850514,0,0,0,0,0,1.21510125100316,0,0,0,0,0,0,0,2.58136415292167,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.93914611890846,0,0,0,0,0,0,0,0,6.10895466869048,0.773494655682926,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757786982182394,0,0,0,0.852935927603924,0,0.258355639344024,0.0620747142958579,0,0,0,0.435433495793923,0,14.1439311330634,3.65783247502649,0,0,0,0,0,0,0,0,0,2.21401172950129,0 | ||
|short_description=p4@CU688247,p4@CU689025,p4@CU689831,p4@CU689833,p4@CU689835,p4@CU691143 | |||
}} | }} |
Latest revision as of 13:04, 29 July 2015
Short description: | p4@CU688247, p4@CU689025, p4@CU689831, p4@CU689833, p4@CU689835, p4@CU691143 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CU688247_5end, CAGE_peak_4_at_CU689025_5end, CAGE_peak_4_at_CU689831_5end, CAGE_peak_4_at_CU689833_5end, CAGE_peak_4_at_CU689835_5end, CAGE_peak_4_at_CU691143_5end |
Coexpression cluster: | C668_lymphangiectasia_lymph_submaxillary_appendix_vein_CD19_lymphoma |
Association with transcript: | 101bp_to_CU688247, CU689025, CU689831, CU689833, CU689835, CU691143_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 3.42e-51 | 14 |
lymphocyte of B lineage | 6.55e-49 | 24 |
pro-B cell | 6.55e-49 | 24 |
lymphoid lineage restricted progenitor cell | 2.26e-20 | 52 |
lymphocyte | 6.54e-20 | 53 |
common lymphoid progenitor | 6.54e-20 | 53 |
mature B cell | 1.15e-09 | 2 |
pre-B-II cell | 1.15e-09 | 2 |
transitional stage B cell | 1.15e-09 | 2 |
small pre-B-II cell | 1.15e-09 | 2 |
immature B cell | 1.15e-09 | 2 |
nongranular leukocyte | 5.09e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.09e-23 | 114 |
blood | 2.49e-09 | 15 |
haemolymphatic fluid | 2.49e-09 | 15 |
organism substance | 2.49e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.95e-10 | 10 |