FFCP PHASE1:Hg19::chr3:142607979..142607990,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:142607979..142607990,- to FFCP PHASE1:Hg19::chr3:142607979..142607990,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26577 | |EntrezGene=26577 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8739 | |HGNC=8739 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-45bp_to_uc003evd.2_5end | |||
|cluster_id=chr3:142607979..142607990,- | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_8_at_PCOLCE2_5end | |||
|id=chr3:142607979..142607990,- | |||
|ontology_enrichment_celltype=CL:0000136!1.34e-13!15;CL:0000055!2.93e-11!180 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.14e-20;13!CL:0000135;3.82e-14;3!CL:0000388;3.82e-14;3!CL:0002595;7.36e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.06e-27,15;CL:0000135,3.59e-14,3;CL:0000388,3.59e-14,3;CL:0002595,5.79e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.82e-10;4!UBERON:0007284;1.82e-10;4!UBERON:0006965;2.03e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!7.86e-08!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;3.82e-14;3!UBERON:0000043;3.82e-14;3!UBERON:0007845;3.82e-14;3!UBERON:0003978;8.35e-14;3!UBERON:0000946;8.35e-14;3!UBERON:0002133;3.98e-10;2!UBERON:0002081;6.61e-10;2!UBERON:0004573;6.90e-08;33!UBERON:0004571;6.90e-08;33!UBERON:0003834;7.36e-08;5!UBERON:0001533;7.36e-08;5!UBERON:0004457;1.62e-07;9!UBERON:0000042;1.62e-07;9!UBERON:0010313;4.98e-07;10!UBERON:0004151;7.30e-07;3!UBERON:0001637;7.83e-07;42!UBERON:0003509;7.83e-07;42!UBERON:0004572;7.83e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004797,4.66e-15,7;UBERON:0007846,3.59e-14,3;UBERON:0000043,3.59e-14,3;UBERON:0007845,3.59e-14,3;UBERON:0003978,4.88e-14,3;UBERON:0009751,4.88e-14,3;UBERON:0000946,4.88e-14,3;UBERON:0002523,4.88e-14,3;UBERON:0005983,4.88e-14,3;UBERON:0002165,4.88e-14,3;UBERON:0002062,4.88e-14,3;UBERON:0007280,4.88e-14,3;UBERON:0007500,7.87e-11,59;UBERON:0001981,7.87e-11,59;UBERON:0004537,7.87e-11,59;UBERON:0006965,7.87e-11,59;UBERON:0002133,3.74e-10,2;UBERON:0002081,7.24e-10,2;UBERON:0010227,7.24e-10,2;UBERON:0004872,2.90e-09,83;UBERON:0000055,5.29e-09,68;UBERON:0004573,1.35e-08,33;UBERON:0004571,1.35e-08,33;UBERON:0003834,5.79e-08,5;UBERON:0001533,5.79e-08,5;UBERON:0001637,6.11e-08,42;UBERON:0003509,6.11e-08,42;UBERON:0004572,6.11e-08,42;UBERON:0002049,1.77e-07,78;UBERON:0007798,1.77e-07,78;UBERON:0010313,4.28e-07,10;UBERON:0002342,4.28e-07,10;UBERON:0005062,4.28e-07,10;UBERON:0001009,6.60e-07,112;UBERON:0004151,7.75e-07,3;UBERON:0007100,8.95e-07,27 | |||
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| ||
|short_description=p8@PCOLCE2 | |||
}} | }} |
Latest revision as of 05:02, 25 September 2015
Short description: | p8@PCOLCE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PCOLCE2_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | -45bp_to_uc003evd.2_5end |
EntrezGene: | PCOLCE2 |
HGNC: | 8739 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.06e-27 | 15 |
fibrocyte | 3.59e-14 | 3 |
tendon cell | 3.59e-14 | 3 |
smooth muscle cell of the subclavian artery | 5.79e-08 | 5 |