FFCP PHASE1:Hg19::chr3:52017352..52017364,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:52017352..52017364,+ to FFCP PHASE1:Hg19::chr3:52017352..52017364,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=95 | |EntrezGene=95 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=177 | |HGNC=177 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000496679_5end | |||
|cluster_id=chr3:52017352..52017364,+ | |||
|description=CAGE_peak_4_at_ACY1_5end | |||
|id=chr3:52017352..52017364,+ | |||
|ontology_enrichment_celltype=CL:0000223!1.28e-15!59;CL:0000066!3.62e-15!254;CL:0002076!3.64e-15!43 | |||
|ontology_enrichment_celltype_v019=CL:0002368;1.08e-13;13!CL:0002159;3.55e-13;14!CL:0002328;3.82e-12;3!CL:0002076;1.31e-11;42!CL:0000362;7.38e-11;9!CL:0002202;9.28e-11;9!CL:0002632;9.28e-11;9!CL:0000575;2.42e-09;2!CL:0000244;6.22e-09;4!CL:0000731;6.22e-09;4!CL:0000317;8.63e-09;2!CL:1000448;8.63e-09;2!CL:0002308;8.63e-09;2!CL:0002140;8.63e-09;2!CL:0000312;8.50e-08;5!CL:0000622;1.86e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,1.04e-14,58;CL:0002076,1.99e-14,42;CL:0002368,1.02e-13,13;CL:0002159,2.20e-13,14;CL:0002328,2.04e-12,3;CL:0000362,4.84e-11,9;CL:0002202,7.51e-11,9;CL:0002632,7.51e-11,9;CL:0000066,1.60e-09,253;CL:0000575,1.95e-09,2;CL:0000244,3.99e-09,4;CL:0000731,3.99e-09,4;CL:0000317,4.53e-09,2;CL:1000448,4.53e-09,2;CL:0002308,4.53e-09,2;CL:0002140,4.53e-09,2;CL:0000312,7.79e-08,5;CL:0000622,1.85e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000223;2.10e-09;58 | |||
|ontology_enrichment_disease=DOID:305!6.30e-10!106;DOID:162!1.36e-08!235;DOID:14566!1.79e-08!239;DOID:0050687!1.86e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!3.59e-14!169;UBERON:0000925!3.59e-14!169;UBERON:0006595!3.59e-14!169;UBERON:0004921!6.80e-11!129;UBERON:0004185!6.80e-11!129;UBERON:0001007!9.42e-11!155;UBERON:0001555!9.42e-11!155;UBERON:0007026!9.42e-11!155;UBERON:0001004!4.13e-08!72;UBERON:0000077!4.60e-08!130;UBERON:0001041!2.39e-07!98;UBERON:0001048!2.64e-07!168 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;3.82e-12;3!UBERON:0002031;3.82e-12;3!UBERON:0002419;8.63e-09;2!UBERON:0007771;8.63e-09;2!UBERON:0003297;8.63e-09;2!UBERON:0001821;8.63e-09;2!UBERON:0003487;8.63e-09;2!UBERON:0001820;8.63e-09;2!UBERON:0004921;3.13e-08;33!UBERON:0002108;9.00e-08;4!UBERON:0002185;1.86e-07;5!UBERON:0005409;2.40e-07;22!UBERON:0000365;3.14e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,2.04e-12,3;UBERON:0002031,2.04e-12,3;UBERON:0004119,1.39e-09,160;UBERON:0000925,1.39e-09,160;UBERON:0006595,1.39e-09,160;UBERON:0002419,4.53e-09,2;UBERON:0007771,4.53e-09,2;UBERON:0003297,4.53e-09,2;UBERON:0001821,4.53e-09,2;UBERON:0003487,4.53e-09,2;UBERON:0001820,4.53e-09,2;UBERON:0005089,4.53e-09,2;UBERON:0005088,4.53e-09,2;UBERON:0002108,1.12e-07,4;UBERON:0002185,1.29e-07,5;UBERON:0000365,2.21e-07,5;UBERON:0004921,4.80e-07,118 | |||
|phase1_expression=0.181678379270557,1.07050261945492,0.422863212287913,0,0.893922188854576,0,7.59899634504932,0.631719873426831,1.30592814099919,0.245733936501509,0,0.218441372130172,1.05506791291381,0,0.331397375727916,0,0,0,0,0.123121058076788,0.204000691244253,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,1.83884244895785,1.50602959389125,2.21852406100073,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0.167186495390678,0,0.473447805734733,0,0,0,0.221533894583621,0,0.128091319725675,0,0.164437904603676,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0.443458794925128,0.351339142772504,2.16115474571226,3.27865759463288,2.59549109949101,0,0,0,0,0,0,0,0,0,0.56530794192401,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0.311211035399766,0,0.326923806226917,0,0,0.234321431833797,0.312160076830321,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0.211931901159562,0.300091096084402,0,0,0.18611685633159,0.337552664482532,0.0974370051611986,0,0,0,0,0,0.169560592310488,0.57978255948989,0.272746120590835,0.573609190778008,0,0,0.232387885739037,0,0,0.36497735907583,0,0,0,0,0,0.236613600079688,0.168584690078102,0.482022059766964,0,0.217879444092406,0,0,0.392442930250692,0.769494313892781,0,0,0.4115740113314,0,1.26755034821831,0,0.590789906681404,0,0.368965315629341,0,1.75600456653801,4.49607013030478,2.01057944823262,0.740707561268237,0.325808305310325,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0.148631162288728,0.93733833986777,0.671928512795438,0.283550194484773,1.97028749946266,0.871901815541886,4.60059214998253,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0.258543431515556,0,0,0.531876233169741,0,0.257207374262142,0,0.266422179016099,0.285955987316295,0,0.823240336780769,0,0,1.58390374586686,0.301439377059586,0.871533458600294,0,0,0,0,0.239624855491583,0,0,0,0,0,0.224170287987055,0,0,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0.391602314925481,0,0,0,0,0.606255142892519,1.66435439510497,0.604780586659361,0.496215615637554,0,0,0.256278298511402,0,0.160853921143607,1.48418066444991,0.154209693802656,0,0.0821271560138091,0,0,0.846016147141356,1.20303882181971,1.38121483403844,0,0,0,0,0.0770153371044148,0.784349769176855,0,0,0,0,0,0,0,0.501689773854853,0,0,0.223874754722178,0.219259876645935,0,0.769350375349168,0.984043937099117,0.325378394664303,0.206082023295445,0,0,2.29706215198469,1.95018073810956,0,0,0.462145851343933,0.307007349452259,0.137836572484531,0.214840489736547,0.145016693914229,0.0852266274161009,0.178064071293475,1.15699440752685,0.576570202095319,1.53135254993501,0,0,0,0.6970372701606,0,0,0,0.37064843820784,0.143124886741991,0,0,0.38126038784765,0.511795582622668,0,0.318203247925937,0,0,0.274537029736055,0.235624804691373,0.404364963146632,0,0.421258456238981,0,0,0,0,0,0,0.551365343546124,0.66343897524122,0,0,0,0,0,0.281695602532241,0,0,0,0.354761064070598,0,0,0.379473173765715,0,0.962221127255121,2.01090682660736,2.17781969722645,0.564862804660675,1.29151611801369,1.68471475667626,1.7737206141467,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.371606350251437,0,0,0.318852545457645,0.199579371432817,0,0,0.649243880549111,0.280797178113459,0.228234679033192,0,0,0.338583555603207,0.321176150207399,0.403599414382095,0,0,0.307240764308458,0,0.166849141711909,0.19538809540204,0,0,0,0,0,2.05854594449042,0.146508179271894,0.121360521749513,0.111443384277478,0,0,0,0.307160702099232,0,0,0,0.329607748453519,0.211125408127993,0,0.276283915531148,0,0,0,0.311039587661807,0.269605053441981,0.179021174675609,0,0,0,0,0.969332746095218,0.0927680981618513,0,0.520855522170466,0.437299999980979,0,0.1137934482855,0.254253650292766,0.472775363535873,0,0.583209226766509,0.173624994933292,0,0,0,0,0,0,0,1.25481369850743,0.0769502585037971,0.113942055847001,0.69169171316418,0.448788222048861,0.217294743844016,0.31900115973192,0.183195186803725,0,2.04386596391473,0.156980256395025,0,0.225595660617181,0,0.167821586975843,0.189753732724185,0,0,0.163232808159148,0.141353071433941,0.649165919226273,0.995261931078505,1.50377859655677,0,0,0,0.208843899010911,0,0,0,0,0.19566461893209,1.21390189767046,0,0,0,0,2.55549813004637,0.933193722575224,0,0.330991955875499,0,0,0.853828638089378,0,0.694238953340524,0.783939179315021,0.435296032902013,0.17472666824203,0,0.290268993867255,0,0.164230914106418,0.0969890164884194,0,0.677942222341597,0.137041924646751,0,0,0,0,0.640358984218058,0.19980960958213,2.01726584015748,0.80175617316141,0.171594997861965,0,0.124252535565433,0.942776138467182,0.407712618220842,0.104602846312333,0.203996435272644,0.288950589901519,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,2.32991899054908,0.236349546921671,0.08241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| |phase1_expression=0.181678379270557,1.07050261945492,0.422863212287913,0,0.893922188854576,0,7.59899634504932,0.631719873426831,1.30592814099919,0.245733936501509,0,0.218441372130172,1.05506791291381,0,0.331397375727916,0,0,0,0,0.123121058076788,0.204000691244253,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,1.83884244895785,1.50602959389125,2.21852406100073,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0.167186495390678,0,0.473447805734733,0,0,0,0.221533894583621,0,0.128091319725675,0,0.164437904603676,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0.443458794925128,0.351339142772504,2.16115474571226,3.27865759463288,2.59549109949101,0,0,0,0,0,0,0,0,0,0.56530794192401,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0.311211035399766,0,0.326923806226917,0,0,0.234321431833797,0.312160076830321,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0.211931901159562,0.300091096084402,0,0,0.18611685633159,0.337552664482532,0.0974370051611986,0,0,0,0,0,0.169560592310488,0.57978255948989,0.272746120590835,0.573609190778008,0,0,0.232387885739037,0,0,0.36497735907583,0,0,0,0,0,0.236613600079688,0.168584690078102,0.482022059766964,0,0.217879444092406,0,0,0.392442930250692,0.769494313892781,0,0,0.4115740113314,0,1.26755034821831,0,0.590789906681404,0,0.368965315629341,0,1.75600456653801,4.49607013030478,2.01057944823262,0.740707561268237,0.325808305310325,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0.148631162288728,0.93733833986777,0.671928512795438,0.283550194484773,1.97028749946266,0.871901815541886,4.60059214998253,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0.258543431515556,0,0,0.531876233169741,0,0.257207374262142,0,0.266422179016099,0.285955987316295,0,0.823240336780769,0,0,1.58390374586686,0.301439377059586,0.871533458600294,0,0,0,0,0.239624855491583,0,0,0,0,0,0.224170287987055,0,0,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0.391602314925481,0,0,0,0,0.606255142892519,1.66435439510497,0.604780586659361,0.496215615637554,0,0,0.256278298511402,0,0.160853921143607,1.48418066444991,0.154209693802656,0,0.0821271560138091,0,0,0.846016147141356,1.20303882181971,1.38121483403844,0,0,0,0,0.0770153371044148,0.784349769176855,0,0,0,0,0,0,0,0.501689773854853,0,0,0.223874754722178,0.219259876645935,0,0.769350375349168,0.984043937099117,0.325378394664303,0.206082023295445,0,0,2.29706215198469,1.95018073810956,0,0,0.462145851343933,0.307007349452259,0.137836572484531,0.214840489736547,0.145016693914229,0.0852266274161009,0.178064071293475,1.15699440752685,0.576570202095319,1.53135254993501,0,0,0,0.6970372701606,0,0,0,0.37064843820784,0.143124886741991,0,0,0.38126038784765,0.511795582622668,0,0.318203247925937,0,0,0.274537029736055,0.235624804691373,0.404364963146632,0,0.421258456238981,0,0,0,0,0,0,0.551365343546124,0.66343897524122,0,0,0,0,0,0.281695602532241,0,0,0,0.354761064070598,0,0,0.379473173765715,0,0.962221127255121,2.01090682660736,2.17781969722645,0.564862804660675,1.29151611801369,1.68471475667626,1.7737206141467,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.371606350251437,0,0,0.318852545457645,0.199579371432817,0,0,0.649243880549111,0.280797178113459,0.228234679033192,0,0,0.338583555603207,0.321176150207399,0.403599414382095,0,0,0.307240764308458,0,0.166849141711909,0.19538809540204,0,0,0,0,0,2.05854594449042,0.146508179271894,0.121360521749513,0.111443384277478,0,0,0,0.307160702099232,0,0,0,0.329607748453519,0.211125408127993,0,0.276283915531148,0,0,0,0.311039587661807,0.269605053441981,0.179021174675609,0,0,0,0,0.969332746095218,0.0927680981618513,0,0.520855522170466,0.437299999980979,0,0.1137934482855,0.254253650292766,0.472775363535873,0,0.583209226766509,0.173624994933292,0,0,0,0,0,0,0,1.25481369850743,0.0769502585037971,0.113942055847001,0.69169171316418,0.448788222048861,0.217294743844016,0.31900115973192,0.183195186803725,0,2.04386596391473,0.156980256395025,0,0.225595660617181,0,0.167821586975843,0.189753732724185,0,0,0.163232808159148,0.141353071433941,0.649165919226273,0.995261931078505,1.50377859655677,0,0,0,0.208843899010911,0,0,0,0,0.19566461893209,1.21390189767046,0,0,0,0,2.55549813004637,0.933193722575224,0,0.330991955875499,0,0,0.853828638089378,0,0.694238953340524,0.783939179315021,0.435296032902013,0.17472666824203,0,0.290268993867255,0,0.164230914106418,0.0969890164884194,0,0.677942222341597,0.137041924646751,0,0,0,0,0.640358984218058,0.19980960958213,2.01726584015748,0.80175617316141,0.171594997861965,0,0.124252535565433,0.942776138467182,0.407712618220842,0.104602846312333,0.203996435272644,0.288950589901519,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,2.32991899054908,0.236349546921671,0.08241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| ||
|short_description=p4@ACY1 | |||
}} | }} |
Latest revision as of 22:22, 18 September 2015
Short description: | p4@ACY1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ACY1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000496679_5end |
EntrezGene: | ACY1 |
HGNC: | 177 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 1.04e-14 | 58 |
endo-epithelial cell | 1.99e-14 | 42 |
respiratory epithelial cell | 1.02e-13 | 13 |
general ecto-epithelial cell | 2.20e-13 | 14 |
bronchial epithelial cell | 2.04e-12 | 3 |
epidermal cell | 4.84e-11 | 9 |
epithelial cell of tracheobronchial tree | 7.51e-11 | 9 |
epithelial cell of lower respiratory tract | 7.51e-11 | 9 |
epithelial cell | 1.60e-09 | 253 |
corneal epithelial cell | 1.95e-09 | 2 |
transitional epithelial cell | 3.99e-09 | 4 |
urothelial cell | 3.99e-09 | 4 |
sebum secreting cell | 4.53e-09 | 2 |
epithelial cell of sweat gland | 4.53e-09 | 2 |
epithelial cell of skin gland | 4.53e-09 | 2 |
acinar cell of sebaceous gland | 4.53e-09 | 2 |
keratinocyte | 7.79e-08 | 5 |
acinar cell | 1.85e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 2.04e-12 | 3 |
epithelium of bronchus | 2.04e-12 | 3 |
endoderm-derived structure | 1.39e-09 | 160 |
endoderm | 1.39e-09 | 160 |
presumptive endoderm | 1.39e-09 | 160 |
skin gland | 4.53e-09 | 2 |
epidermis gland | 4.53e-09 | 2 |
gland of integumental system | 4.53e-09 | 2 |
sebaceous gland | 4.53e-09 | 2 |
skin sebaceous gland | 4.53e-09 | 2 |
sweat gland | 4.53e-09 | 2 |
sweat gland placode | 4.53e-09 | 2 |
sebaceous gland placode | 4.53e-09 | 2 |
small intestine | 1.12e-07 | 4 |
bronchus | 1.29e-07 | 5 |
urothelium | 2.21e-07 | 5 |
subdivision of digestive tract | 4.80e-07 | 118 |