FFCP PHASE1:Hg19::chr4:39322144..39322160,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:39322144..39322160,- | |||
|description=CAGE_peak_at_chr4:39322144..39322160,- | |||
|id=chr4:39322144..39322160,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002253;4.66e-21;2!CL:0002563;3.10e-11;4!CL:0000569;3.10e-11;4!CL:0002569;6.33e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,3.81e-21,2;CL:0000569,2.53e-11,4;CL:0000011,2.53e-11,4;CL:0002563,2.80e-11,4;CL:0002569,7.25e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000011;3.10e-11;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002360;4.66e-21;2!UBERON:0000094;4.66e-21;2!UBERON:0010743;4.66e-21;2!UBERON:0001052;3.10e-11;4!UBERON:0001242;3.10e-11;4!UBERON:0001262;3.10e-11;4!UBERON:0004786;3.10e-11;4!UBERON:0004808;3.10e-11;4!UBERON:0001277;3.10e-11;4!UBERON:0002119;3.10e-11;4!UBERON:0004907;2.97e-09;5!UBERON:0003422;6.33e-08;6!UBERON:0000485;5.70e-07;7!UBERON:0003929;5.70e-07;7!UBERON:0003104;5.70e-07;7!UBERON:0009142;5.70e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002360,4.66e-21,2;UBERON:0000094,4.66e-21,2;UBERON:0010743,4.66e-21,2;UBERON:0001052,2.80e-11,4;UBERON:0001242,2.80e-11,4;UBERON:0001262,2.80e-11,4;UBERON:0004786,2.80e-11,4;UBERON:0004808,2.80e-11,4;UBERON:0001277,2.80e-11,4;UBERON:0002119,3.42e-11,4;UBERON:0004907,2.74e-09,5;UBERON:0003422,7.25e-08,6 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506522046658319,0.397227542439656,0.286836620748814,0.709336764396714,0,0,0.98667019366864,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0.587043471179108,0,0,0,0,0,0,0.234004265139238,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.517086863031111,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0.871533458600294,0.099972991182057,0,0,0,1.19812427745791,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0.535286966391485,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0.106727557803444,0,0,0,0,0.153461973288062,0,0.768834895534206,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0.114814448164607,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366277859273374,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0.464845549297286,0.62962469366128,0,0.308033580176089,0,0,0.18532421910392,0.429374660225974,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0.66343897524122,0.438450885253763,0,0,0.202910376962704,0,0,0,0,0.7133421029625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0.223676107892416,0.166849141711909,0,0,0,0,0.33307196799782,0,0.18714054040822,0,0.242721043499027,0,0,0,0,0,0,0,0.222617410045812,0.16480387422676,0,0,0,0.503865495708552,0.20453736500431,0.123084805461069,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0.347249989866585,0,0,0,0.110579259931225,0,1.31631238292384,0,0,0.0769502585037971,0,0,0.0897576444097721,0.108647371922008,0,0,0,0,0.156980256395025,0,0,0,0.167821586975843,0,0,0,0,1.55488378577335,0,0,0,0.611030144933625,0,0,0,0.269604531922708,0,0.234264445725339,0.364909578431332,0,0,0,0,0.30607276163049,0.252746318513952,0,0,0,0.661983911750998,0,0,0,0.138674673013139,0,0,0,0,0.171986032471617,0.0967563312890851,0.0730893170861856,0,0,0,0,0.137041924646751,0.19871461170299,0.189932387867636,0,0,0,0,0.144090417154106,0,0,0,0,0,0.271808412147228,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.0787831823072236,0.0824158583811665,0.26961417541674,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0.443716206147409,0.248385611765534,0.138348634936231,0,0.151649117541648,0,0,0.468334905806882,0,0,0,0.554805861502613,0,0,0,1.60188047877847,0.604923695052956,0.15543720058278,0.147855149989634,0,0,0,1.24411862352257,0,0,0,0,0,0,0,0.464033759878494,0.398095888698616,0.400027764663154,0.343395705182793,0,0,0,0,0,0,0,0.489473409012935,0.895444205407437,0,0.219284049578707,0,0,0,0,0.345430341731199,0,0,0.194860308839388,0,0,0,0,0.211312123358627,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0.169732529954025,0,0,0,0,0.0788617450012534,0,0,0.3062454773532,0.321146125482298,0,0,0,0,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,0.202612753855184,0,0,0,0,0,0,0,0.255524855279191,0.535701835878287,0,0.606965604236632,0.227662191351298,0,0,0,0.271878931907327,0.131545547125698,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0.170426809518315,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0.392616934229891,0.594092800654172,0.8453114551668,0.509781344063451,0,0,0,0,0,0,0,0,0,0.157771562193185,0.0679914901909147,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0.0757786982182394,0,0,0,0,0.23806443146374,0.0645889098360061,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0.0898252021065869,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506522046658319,0.397227542439656,0.286836620748814,0.709336764396714,0,0,0.98667019366864,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0.587043471179108,0,0,0,0,0,0,0.234004265139238,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.517086863031111,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0.871533458600294,0.099972991182057,0,0,0,1.19812427745791,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0.535286966391485,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0.106727557803444,0,0,0,0,0.153461973288062,0,0.768834895534206,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0.114814448164607,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366277859273374,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0.464845549297286,0.62962469366128,0,0.308033580176089,0,0,0.18532421910392,0.429374660225974,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0.66343897524122,0.438450885253763,0,0,0.202910376962704,0,0,0,0,0.7133421029625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0.223676107892416,0.166849141711909,0,0,0,0,0.33307196799782,0,0.18714054040822,0,0.242721043499027,0,0,0,0,0,0,0,0.222617410045812,0.16480387422676,0,0,0,0.503865495708552,0.20453736500431,0.123084805461069,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0.347249989866585,0,0,0,0.110579259931225,0,1.31631238292384,0,0,0.0769502585037971,0,0,0.0897576444097721,0.108647371922008,0,0,0,0,0.156980256395025,0,0,0,0.167821586975843,0,0,0,0,1.55488378577335,0,0,0,0.611030144933625,0,0,0,0.269604531922708,0,0.234264445725339,0.364909578431332,0,0,0,0,0.30607276163049,0.252746318513952,0,0,0,0.661983911750998,0,0,0,0.138674673013139,0,0,0,0,0.171986032471617,0.0967563312890851,0.0730893170861856,0,0,0,0,0.137041924646751,0.19871461170299,0.189932387867636,0,0,0,0,0.144090417154106,0,0,0,0,0,0.271808412147228,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.0787831823072236,0.0824158583811665,0.26961417541674,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0.443716206147409,0.248385611765534,0.138348634936231,0,0.151649117541648,0,0,0.468334905806882,0,0,0,0.554805861502613,0,0,0,1.60188047877847,0.604923695052956,0.15543720058278,0.147855149989634,0,0,0,1.24411862352257,0,0,0,0,0,0,0,0.464033759878494,0.398095888698616,0.400027764663154,0.343395705182793,0,0,0,0,0,0,0,0.489473409012935,0.895444205407437,0,0.219284049578707,0,0,0,0,0.345430341731199,0,0,0.194860308839388,0,0,0,0,0.211312123358627,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0.169732529954025,0,0,0,0,0.0788617450012534,0,0,0.3062454773532,0.321146125482298,0,0,0,0,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,0.202612753855184,0,0,0,0,0,0,0,0.255524855279191,0.535701835878287,0,0.606965604236632,0.227662191351298,0,0,0,0.271878931907327,0.131545547125698,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0.170426809518315,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0.392616934229891,0.594092800654172,0.8453114551668,0.509781344063451,0,0,0,0,0,0,0,0,0,0.157771562193185,0.0679914901909147,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0.0757786982182394,0,0,0,0,0.23806443146374,0.0645889098360061,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0.0898252021065869,0,0,0.406896178315738,0,0,0 | ||
|short_description=p@chr4:39322144..39322160,- | |||
}} | }} |
Latest revision as of 05:02, 30 July 2015
Short description: | p@chr4:39322144..39322160, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:39322144..39322160, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 3.81e-21 | 2 |
cardiac mesenchymal cell | 2.53e-11 | 4 |
migratory trunk neural crest cell | 2.53e-11 | 4 |
intestinal epithelial cell | 2.80e-11 | 4 |
mesenchymal stem cell of umbilical cord | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
meninx | 4.66e-21 | 2 |
membrane organ | 4.66e-21 | 2 |
meningeal cluster | 4.66e-21 | 2 |
rectum | 2.80e-11 | 4 |
intestinal mucosa | 2.80e-11 | 4 |
wall of intestine | 2.80e-11 | 4 |
gastrointestinal system mucosa | 2.80e-11 | 4 |
gastrointestinal system epithelium | 2.80e-11 | 4 |
intestinal epithelium | 2.80e-11 | 4 |
left ovary | 3.42e-11 | 4 |
lower digestive tract | 2.74e-09 | 5 |
mesenchyme of umbilical cord | 7.25e-08 | 6 |