FFCP PHASE1:Hg19::chr5:35047958..35047965,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64902 | |EntrezGene=64902 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14412 | |HGNC=14412 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=29bp_to_ENST00000505542_5end | |||
|cluster_id=chr5:35047958..35047965,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_5_at_AGXT2_5end | |||
|id=chr5:35047958..35047965,- | |||
|ontology_enrichment_celltype=CL:0000181!3.33e-12!12;CL:0000417!3.33e-12!12;CL:0000668!3.33e-12!12;CL:0000414!3.33e-12!12;CL:0000412!3.33e-12!12;CL:0000182!3.33e-12!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.44e-17;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.44e-17,12 | |||
|ontology_enrichment_development_v019=UBERON:0003104;3.75e-12;31!UBERON:0003918;7.74e-10;10!UBERON:0007687;7.74e-10;10!UBERON:0004161;6.10e-09;11!UBERON:0009497;1.05e-07;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!6.10e-21!26;UBERON:0002107!2.96e-20!19;UBERON:0006925!2.96e-20!19;UBERON:0008836!2.96e-20!19;UBERON:0008835!1.65e-17!22;UBERON:0003894!1.65e-17!22;UBERON:0009854!9.46e-17!23;UBERON:0002368!1.61e-15!35;UBERON:0007499!2.04e-15!25;UBERON:0009497!2.04e-15!25;UBERON:0000015!2.04e-15!25;UBERON:0002423!2.04e-15!25;UBERON:0006235!2.04e-15!25;UBERON:0004161!2.04e-15!25;UBERON:0009856!7.94e-15!26;UBERON:0005172!2.72e-13!55;UBERON:0005173!2.72e-13!55;UBERON:0002365!1.92e-12!31;UBERON:0002330!1.92e-12!31;UBERON:0000949!5.02e-12!45;UBERON:0002417!6.11e-12!61;UBERON:0000916!6.11e-12!61;UBERON:0003929!5.56e-10!54;UBERON:0002530!4.11e-09!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;5.44e-29;19!UBERON:0006925;5.44e-29;19!UBERON:0002423;4.06e-22;25!UBERON:0002365;7.58e-18;31!UBERON:0002330;7.58e-18;31!UBERON:0002368;1.81e-15;33!UBERON:0005172;5.33e-15;52!UBERON:0005173;5.33e-15;52!UBERON:0000949;3.00e-11;43!UBERON:0002417;3.06e-10;58!UBERON:0000916;3.06e-10;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.44e-29,19;UBERON:0006925,5.44e-29,19;UBERON:0008836,5.44e-29,19;UBERON:0008835,4.35e-25,22;UBERON:0003894,4.35e-25,22;UBERON:0009854,5.18e-24,23;UBERON:0007499,4.06e-22,25;UBERON:0009497,4.06e-22,25;UBERON:0000015,4.06e-22,25;UBERON:0002423,4.06e-22,25;UBERON:0006235,4.06e-22,25;UBERON:0004161,4.06e-22,25;UBERON:0009856,2.80e-21,26;UBERON:0005172,7.71e-20,54;UBERON:0005173,7.71e-20,54;UBERON:0002365,6.78e-18,31;UBERON:0002330,6.78e-18,31;UBERON:0002417,7.46e-18,60;UBERON:0000916,7.46e-18,60;UBERON:0002368,7.01e-16,35;UBERON:0000949,2.12e-12,45;UBERON:0005177,1.45e-10,101;UBERON:0003929,2.31e-10,54;UBERON:0009569,1.65e-09,112;UBERON:0002530,1.69e-09,59;UBERON:0005911,7.32e-07,82 | |||
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|short_description=p5@AGXT2 | |||
}} | }} |
Latest revision as of 18:03, 17 September 2015
Short description: | p5@AGXT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_AGXT2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 29bp_to_ENST00000505542_5end |
EntrezGene: | AGXT2 |
HGNC: | 14412 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.44e-17 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 5.44e-29 | 19 |
digestive gland | 5.44e-29 | 19 |
liver bud | 5.44e-29 | 19 |
hepatic diverticulum | 4.35e-25 | 22 |
liver primordium | 4.35e-25 | 22 |
digestive tract diverticulum | 5.18e-24 | 23 |
epithelial sac | 4.06e-22 | 25 |
epithelium of foregut-midgut junction | 4.06e-22 | 25 |
anatomical boundary | 4.06e-22 | 25 |
hepatobiliary system | 4.06e-22 | 25 |
foregut-midgut junction | 4.06e-22 | 25 |
septum transversum | 4.06e-22 | 25 |
sac | 2.80e-21 | 26 |
abdomen element | 7.71e-20 | 54 |
abdominal segment element | 7.71e-20 | 54 |
exocrine gland | 6.78e-18 | 31 |
exocrine system | 6.78e-18 | 31 |
abdominal segment of trunk | 7.46e-18 | 60 |
abdomen | 7.46e-18 | 60 |
endocrine gland | 7.01e-16 | 35 |
endocrine system | 2.12e-12 | 45 |
trunk region element | 1.45e-10 | 101 |
gut epithelium | 2.31e-10 | 54 |
subdivision of trunk | 1.65e-09 | 112 |
gland | 1.69e-09 | 59 |
endo-epithelium | 7.32e-07 | 82 |