FFCP PHASE1:Hg19::chr5:37840004..37840017,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2668 | |EntrezGene=2668 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4232 | |HGNC=4232 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-216bp_to_ENST00000515058_5end | |||
|cluster_id=chr5:37840004..37840017,- | |||
|description=CAGE_peak_1_at_GDNF_5end | |||
|id=chr5:37840004..37840017,- | |||
|ontology_enrichment_celltype=CL:0000057!4.63e-16!75;CL:0000055!2.37e-13!180;CL:0002620!2.78e-12!23;CL:0002556!6.47e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002581;6.32e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002581,4.44e-10,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;6.32e-10;1!DOID:1357;6.32e-10;1!DOID:3347;6.32e-10;1!DOID:2513;6.32e-10;1!DOID:171;1.91e-08;10!DOID:201;9.27e-07;6!DOID:0060100;9.27e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,3.71e-10,1;DOID:1357,3.71e-10,1;DOID:3347,5.30e-10,1;DOID:2513,7.55e-10,1;DOID:171,1.72e-08,10;DOID:201,8.64e-07,6;DOID:0060100,8.64e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002199!1.66e-11!45;UBERON:0002416!1.66e-11!45;UBERON:0002097!2.21e-11!40;UBERON:0003102!7.42e-10!95;UBERON:0001758!6.47e-07!6;UBERON:0003672!6.47e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;2.48e-10;1!UBERON:0001764;6.32e-10;1!UBERON:0001825;6.32e-10;1!UBERON:0002346;8.25e-10;4!UBERON:0000923;8.25e-10;4!UBERON:0010316;8.25e-10;4!UBERON:0005291;8.25e-10;4!UBERON:0002050;5.12e-08;5!UBERON:0005423;5.12e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,2.84e-10,1;UBERON:0001764,3.71e-10,1;UBERON:0001825,3.71e-10,1;UBERON:0002097,3.46e-07,41 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0.98667019366864,0,0,0,0,0,0,0.312160076830321,0,0,0.117434498643765,0.647491777472526,0.140450806702248,0.204154171254893,0.245668634623536,0.103325781175765,0,0.247266929278557,0,0,0.336672227908132,0.125118519871964,0.277064115484183,0.438977620880838,0.612975591598039,0.150238058906597,0,0.179389635688862,0.213557388818567,0.211931901159562,0.300091096084402,0.103052529238439,0.257640540045629,0,1.0126579934476,0.0974370051611986,1.00973509697646,0.276149695926898,0.161646056818812,0.355009592516614,0.201504196455281,0,0.193260853163297,0,0,0,0,0,0.310983165046111,0,0,0,0,2.76269842704961,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201057944823262,0,1.3032332212413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268675568108545,0,0.766765358330422,0,0,0.207328115540772,0,0,0,0.763976851116555,0,0,0.411309970813294,0,0.571652865261156,0,0,0,0.517086863031111,0,0,0.26593811658487,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0.473107245101804,0,0.300946099727719,0,0,0,0.368738337083406,0.347534457872331,0,0,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0.128139149255701,0,0,1.48418066444991,0.771048469013278,0.177561725313127,0.164254312027618,0,0.697262270759755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.290012154876366,0,0,0.137836572484531,0,0,0.255679882248303,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0.421258456238981,0,0.243713489631284,0,0,0,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0.286822704408103,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,1.22439575525196,0,0,0,0,0,0.102268682502155,0,1.24415835064723,0,0,0,0,0,2.22273980289274,0,0.278304294485554,0,0,0,0,0,0,0,0,1.16641845353302,0,0,0.241192877250816,0,3.31737779793674,0.591095237907095,0,0,0,0,0.455768223388005,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0.859930162358083,0,0,0,0,0,0,0.274083849293502,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,2.02265412931063,0,0.410716136675979,0,0.859530882839914,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0.714695326373367,0,0,0,0,0.326587360109409,1.19730191562487,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57054096250234,0,0.122026264901963,0.1251909307065,0,0,0.124192805882767,0.415045904808692,0,2.72968411574966,0.285465333544967,0,0,0,0.149254802886874,0.467426619694449,0,0.757612021100357,0,0,0,0,0.15543720058278,0.295710299979268,0.159296767163702,0.449803112163605,0.310525913752519,0,0,0,0,0,0,0,0,2.32016879939247,0.398095888698616,0,0,0,0,0,0,0,0,0.694567422971502,0,0.179088841081487,0,0.219284049578707,0.530067437837643,0,0,0,0,0,0,1.36402216187572,0.265729680626726,0.654261577023377,0.327609848846413,0,0,0,0,0,0,2.39337735327393,0.139879507719444,0,0,0,1.25812753484717,0,0.169732529954025,1.48802444071178,0,0.558644917973244,0.318004350653419,0,0,0.705351887381368,0.6124909547064,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,1.3807198521202,0,0.150420656698515,0.80682027481408,0,0,0,0,0,0,0.206686796501184,0,0,0,0,6.68310728566558,0,0,0,0,0,0,0,0,0.203909198930495,0,0,0,0.313972371402056,0,0,1.82631744101899,0,0,0.0714765441766563,0.158013611732727,0,0.173858272302579,0,0,0,0,0,0.828324005113957,0.766920642832419,0.423387050190929,0,0.31020638566432,0,0,0,0,0,0.307988420568741,0,0,0,0,0.118920090777569,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0.169927114687817,0,0,0,0,1.41157948686277,0,0,0,0,0.473314686579554,0.0679914901909147,0,0.5290268405154,0.371995018166751,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0.517164979309476,0,0.23806443146374,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0.960546112899439,0,0,0,0.244482888365733,0,0,0,0 | |phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0.98667019366864,0,0,0,0,0,0,0.312160076830321,0,0,0.117434498643765,0.647491777472526,0.140450806702248,0.204154171254893,0.245668634623536,0.103325781175765,0,0.247266929278557,0,0,0.336672227908132,0.125118519871964,0.277064115484183,0.438977620880838,0.612975591598039,0.150238058906597,0,0.179389635688862,0.213557388818567,0.211931901159562,0.300091096084402,0.103052529238439,0.257640540045629,0,1.0126579934476,0.0974370051611986,1.00973509697646,0.276149695926898,0.161646056818812,0.355009592516614,0.201504196455281,0,0.193260853163297,0,0,0,0,0,0.310983165046111,0,0,0,0,2.76269842704961,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201057944823262,0,1.3032332212413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268675568108545,0,0.766765358330422,0,0,0.207328115540772,0,0,0,0.763976851116555,0,0,0.411309970813294,0,0.571652865261156,0,0,0,0.517086863031111,0,0,0.26593811658487,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0.473107245101804,0,0.300946099727719,0,0,0,0.368738337083406,0.347534457872331,0,0,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0.128139149255701,0,0,1.48418066444991,0.771048469013278,0.177561725313127,0.164254312027618,0,0.697262270759755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.290012154876366,0,0,0.137836572484531,0,0,0.255679882248303,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0.421258456238981,0,0.243713489631284,0,0,0,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0.286822704408103,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,1.22439575525196,0,0,0,0,0,0.102268682502155,0,1.24415835064723,0,0,0,0,0,2.22273980289274,0,0.278304294485554,0,0,0,0,0,0,0,0,1.16641845353302,0,0,0.241192877250816,0,3.31737779793674,0.591095237907095,0,0,0,0,0.455768223388005,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0.859930162358083,0,0,0,0,0,0,0.274083849293502,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,2.02265412931063,0,0.410716136675979,0,0.859530882839914,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0.714695326373367,0,0,0,0,0.326587360109409,1.19730191562487,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57054096250234,0,0.122026264901963,0.1251909307065,0,0,0.124192805882767,0.415045904808692,0,2.72968411574966,0.285465333544967,0,0,0,0.149254802886874,0.467426619694449,0,0.757612021100357,0,0,0,0,0.15543720058278,0.295710299979268,0.159296767163702,0.449803112163605,0.310525913752519,0,0,0,0,0,0,0,0,2.32016879939247,0.398095888698616,0,0,0,0,0,0,0,0,0.694567422971502,0,0.179088841081487,0,0.219284049578707,0.530067437837643,0,0,0,0,0,0,1.36402216187572,0.265729680626726,0.654261577023377,0.327609848846413,0,0,0,0,0,0,2.39337735327393,0.139879507719444,0,0,0,1.25812753484717,0,0.169732529954025,1.48802444071178,0,0.558644917973244,0.318004350653419,0,0,0.705351887381368,0.6124909547064,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,1.3807198521202,0,0.150420656698515,0.80682027481408,0,0,0,0,0,0,0.206686796501184,0,0,0,0,6.68310728566558,0,0,0,0,0,0,0,0,0.203909198930495,0,0,0,0.313972371402056,0,0,1.82631744101899,0,0,0.0714765441766563,0.158013611732727,0,0.173858272302579,0,0,0,0,0,0.828324005113957,0.766920642832419,0.423387050190929,0,0.31020638566432,0,0,0,0,0,0.307988420568741,0,0,0,0,0.118920090777569,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0.169927114687817,0,0,0,0,1.41157948686277,0,0,0,0,0.473314686579554,0.0679914901909147,0,0.5290268405154,0.371995018166751,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0.517164979309476,0,0.23806443146374,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0.960546112899439,0,0,0,0.244482888365733,0,0,0,0 | ||
|short_description=p1@GDNF | |||
}} | }} |
Latest revision as of 20:07, 17 September 2015
Short description: | p1@GDNF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GDNF_5end |
Coexpression cluster: | NA |
Association with transcript: | -216bp_to_ENST00000515058_5end |
EntrezGene: | GDNF |
HGNC: | 4232 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 4.44e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 2.84e-10 | 1 |
maxillary sinus | 3.71e-10 | 1 |
paranasal sinus | 3.71e-10 | 1 |
skin of body | 3.46e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 3.71e-10 | 1 |
maxillary sinus cancer | 3.71e-10 | 1 |
osteosarcoma | 5.30e-10 | 1 |
basal cell carcinoma | 7.55e-10 | 1 |
neuroectodermal tumor | 1.72e-08 | 10 |
connective tissue cancer | 8.64e-07 | 6 |
musculoskeletal system cancer | 8.64e-07 | 6 |