FFCP PHASE1:Hg19::chr5:78365437..78365489,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:78365437..78365489,- to FFCP PHASE1:Hg19::chr5:78365437..78365489,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=29958 | |EntrezGene=29958 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24475 | |HGNC=24475 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UI17,F8W6P8,E5RK15,E5RG50,E5RGI4,F5H1C7,B4E1J9,B3KQ84 | |UniProt=Q9UI17,F8W6P8,E5RK15,E5RG50,E5RGI4,F5H1C7,B4E1J9,B3KQ84 | ||
|association_with_transcript=0bp_to_ENST00000255189,ENST00000380311,ENST00000517853,ENST00000518477,ENST00000524206,ENST00000539598,ENST00000540686,NM_013391,uc003kfs.2,uc011ctf.1,uc011ctg.1_5end | |||
|cluster_id=chr5:78365437..78365489,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_2_at_DMGDH_5end | |||
|id=chr5:78365437..78365489,- | |||
|ontology_enrichment_celltype=CL:0000181!1.48e-07!12;CL:0000417!1.48e-07!12;CL:0000668!1.48e-07!12;CL:0000414!1.48e-07!12;CL:0000412!1.48e-07!12;CL:0000182!1.48e-07!12;CL:0000136!6.65e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000182;7.05e-13;12!CL:0000136;9.81e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,8.00e-13,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;9.44e-14;11!UBERON:0003104;1.73e-12;31!UBERON:0009497;2.59e-11;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.19e-39!115;UBERON:0000475!2.27e-19!365;UBERON:0001049!5.59e-19!57;UBERON:0005068!5.59e-19!57;UBERON:0006241!5.59e-19!57;UBERON:0007135!5.59e-19!57;UBERON:0003075!1.16e-18!86;UBERON:0007284!1.16e-18!86;UBERON:0002346!6.67e-17!90;UBERON:0002616!1.60e-15!59;UBERON:0005743!1.69e-14!86;UBERON:0003080!2.86e-14!42;UBERON:0000153!9.01e-14!129;UBERON:0007811!9.01e-14!129;UBERON:0002780!1.41e-13!41;UBERON:0001890!1.41e-13!41;UBERON:0006240!1.41e-13!41;UBERON:0003056!1.41e-13!61;UBERON:0000033!4.32e-13!123;UBERON:0000073!4.34e-13!94;UBERON:0001016!4.34e-13!94;UBERON:0000481!4.43e-13!347;UBERON:0000955!5.99e-13!69;UBERON:0006238!5.99e-13!69;UBERON:0001017!8.07e-13!82;UBERON:0000477!3.49e-12!286;UBERON:0000483!3.80e-12!309;UBERON:0000119!1.12e-11!312;UBERON:0004111!2.00e-11!241;UBERON:0002020!2.16e-11!34;UBERON:0003528!2.16e-11!34;UBERON:0001893!4.89e-11!34;UBERON:0000025!1.09e-10!194;UBERON:0000062!1.09e-10!511;UBERON:0002791!1.17e-10!33;UBERON:0004121!1.64e-10!169;UBERON:0001869!3.15e-10!32;UBERON:0000468!4.37e-10!659;UBERON:0000924!9.62e-10!173;UBERON:0006601!9.62e-10!173;UBERON:0000467!1.02e-08!625;UBERON:0000480!1.30e-08!626;UBERON:0000479!1.72e-07!787;UBERON:0000064!2.00e-07!219;UBERON:0002308!7.26e-07!9;UBERON:0000125!7.26e-07!9;UBERON:0002368!7.72e-07!35;UBERON:0002619!9.08e-07!22;UBERON:0002107!9.67e-07!19;UBERON:0006925!9.67e-07!19;UBERON:0008836!9.67e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0002368;2.55e-12;33!UBERON:0002107;1.89e-11;19!UBERON:0006925;1.89e-11;19!UBERON:0002423;1.72e-09;25!UBERON:0003296;5.08e-08;4!UBERON:0010133;5.08e-08;4!UBERON:0007023;1.07e-07;114!UBERON:0002298;2.28e-07;6!UBERON:0002365;5.04e-07;31!UBERON:0002330;5.04e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.87e-29,114;UBERON:0002368,8.12e-13,35;UBERON:0002107,2.09e-11,19;UBERON:0006925,2.09e-11,19;UBERON:0008836,2.09e-11,19;UBERON:0009854,1.85e-10,23;UBERON:0008835,1.82e-09,22;UBERON:0003894,1.82e-09,22;UBERON:0009497,2.01e-09,25;UBERON:0000015,2.01e-09,25;UBERON:0002423,2.01e-09,25;UBERON:0006235,2.01e-09,25;UBERON:0004161,2.01e-09,25;UBERON:0000949,6.23e-09,45;UBERON:0009856,6.71e-09,26;UBERON:0003296,3.89e-08,4;UBERON:0010133,3.89e-08,4;UBERON:0007499,5.31e-08,25;UBERON:0002298,7.59e-08,6;UBERON:0002530,1.84e-07,59;UBERON:0002417,1.86e-07,60;UBERON:0000916,1.86e-07,60;UBERON:0002365,4.73e-07,31;UBERON:0002330,4.73e-07,31;UBERON:0005172,5.62e-07,54;UBERON:0005173,5.62e-07,54 | |||
|phase1_expression=0.908391896352783,1.71280419112787,1.40954404095971,0,0.893922188854576,0.872338524100369,0,0.631719873426831,1.04474251279935,0,0,0,0,0.123766352960047,1.32558950291166,0,0,0,0,0,0,0.313454721478088,0,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,0.361439152384566,1.00267582127178,1.44846518960824,0.795285947051099,0,0.283604451492204,0.443458794925128,0.087834785693126,14.4731878424972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0.17859945656816,0,0.563057402416611,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0.529636723252875,0,0.354668382198357,0,0,0,0.933633106199299,0,0,0,0,0.234321431833797,0,0,0.597794722207204,0.23486899728753,0.161872944368132,0,0.408308342509787,0.122834317311768,0.206651562351531,1.18800285728205,1.48360157567134,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0.877955241761676,0.30648779579902,0.751190294532984,0,0.358779271377724,0.213557388818567,0,0.600182192168805,0.412210116953756,0.257640540045629,0,0.337552664482532,0,0.757301322732344,0.276149695926898,0.646584227275248,0.355009592516614,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,126.755034821831,35.3817798003945,49.0355622545565,0,0,0,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0.234817388471643,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0.531876233169741,2.08014873822732,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.299918973546171,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.49076596687656,0,0,0.207970861530807,0,0,0.234282829985426,0.300946099727719,0,0,0,0,0.781952530212746,0,0,0,0,0,0,0,0,0.744323423456331,2.30192959932094,2.24528075546459,1.15325234330131,0.511707249066704,0.321707842287215,0,0,0.355123450626254,0.410635780069046,1.03850885836724,0.697262270759755,0,0,0,0.114814448164607,0.182091168006717,0.786746489756545,0,0.15403067420883,0,0,0.316654886678627,0,0.170093705276516,0.647747748306418,0,0,0.501689773854853,0,0,0.447749509444357,0,0,1.79515087581472,0.328014645699706,0.325378394664303,68.7283547690308,0,0,0,0,1.6068392984416,0.193341436584244,0.616194468458578,0.15350367472613,0.137836572484531,1.18162269355101,1.16013355131383,0,0.356128142586949,0.165284915360978,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0.539617372749944,0.54907405947211,0.235624804691373,0,0,0,0,0,1.05650146756755,0.545999645631943,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0.0982490410131212,0,0.709522128141196,4.64436797654861,2.96365403663912,0.379473173765715,0,0,0,0,73.4321646058877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51619630252546,0,0,0,0,0,0,1.9882952955326,0.984685914873589,0,0,0,1.79323189425963,1.10513566212459,1.0077309914171,0,0,0,0,0,0,1.479651084554,0,0,3.87733098438087,0.371072392647405,0,0,0,2.17499872630438,0,0,0,0,0,0,2.65722415744152,1.4471572635049,0,0.774054819518572,0.886642856860642,1.53569778007781,0,0,1.07730361905316,0,0,0,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.707660516026713,0.611030144933625,0,0,0,1.21322039365219,4.01288823649394,0.234264445725339,0,0,0,3.15667522279512,1.20990716048664,0,1.95878396848313,0,0,0,0,0,0,0,0,0,0,0,7.5132467344073,0,0,0,0,0.581934098930517,0,1.80784592624426,0,0,0.886351143382302,0,0,1.28071796843612,0,0,0,5.3194449337209,0,0,0,0,0,0.101998217636322,0,0.600420288709789,0.821432273351958,0,0,0,1.11712960508902,1.83328339209347,0.717873024576814,0.599037001496973,2.14613024068285,1.33902874465124,0,0.720599767084807,1.16495949527454,2.91497774536727,2.30764403467266,2.56133466645903,5.21665652028169,0,1.59045937961861,1.49823746722733,0,0,0,0,0,0.728994679896296,0,27.6608032620186,8.07800657278971,0,0,0,4.2881719582402,1.98627591109629,0,0.542999601753713,0,0,0,0,0.851940108927109,0.79318464064088,92.47445945087,53.0027555648885,1.93924434542326,1.98348902614035,0,0,0.427149650270779,0.314408610199332,0.414239055347196,0,0,0,0,18.4966053145621,14.7907037473393,16.8490067219904,9.50830629058433,0,0.886068179966986,0.244052529803926,0.3755727921195,2.29363678276028,1.99672292766334,1.36612086471044,0,0,0,0,0,0,0,0,0.934853239388898,0,0.568209015825267,1.76097531226803,0,0.457680136793847,0.151230923763239,0,0.443565449968902,0.63718706865481,0,0.310525913752519,0,0,0.521745061811734,0.450772826991655,0,0.406870733204662,0,0,0,0.796191777397232,0.400027764663154,0,0.673498977531838,0,0,0,0,0,0.694567422971502,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,1.28874165176289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899209151350433,0,0.319267718114302,0.205116364240755,0.252071696221718,0.276629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| |phase1_expression=0.908391896352783,1.71280419112787,1.40954404095971,0,0.893922188854576,0.872338524100369,0,0.631719873426831,1.04474251279935,0,0,0,0,0.123766352960047,1.32558950291166,0,0,0,0,0,0,0.313454721478088,0,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,0.361439152384566,1.00267582127178,1.44846518960824,0.795285947051099,0,0.283604451492204,0.443458794925128,0.087834785693126,14.4731878424972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0.17859945656816,0,0.563057402416611,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0.529636723252875,0,0.354668382198357,0,0,0,0.933633106199299,0,0,0,0,0.234321431833797,0,0,0.597794722207204,0.23486899728753,0.161872944368132,0,0.408308342509787,0.122834317311768,0.206651562351531,1.18800285728205,1.48360157567134,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0.877955241761676,0.30648779579902,0.751190294532984,0,0.358779271377724,0.213557388818567,0,0.600182192168805,0.412210116953756,0.257640540045629,0,0.337552664482532,0,0.757301322732344,0.276149695926898,0.646584227275248,0.355009592516614,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,126.755034821831,35.3817798003945,49.0355622545565,0,0,0,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0.234817388471643,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0.531876233169741,2.08014873822732,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.299918973546171,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.49076596687656,0,0,0.207970861530807,0,0,0.234282829985426,0.300946099727719,0,0,0,0,0.781952530212746,0,0,0,0,0,0,0,0,0.744323423456331,2.30192959932094,2.24528075546459,1.15325234330131,0.511707249066704,0.321707842287215,0,0,0.355123450626254,0.410635780069046,1.03850885836724,0.697262270759755,0,0,0,0.114814448164607,0.182091168006717,0.786746489756545,0,0.15403067420883,0,0,0.316654886678627,0,0.170093705276516,0.647747748306418,0,0,0.501689773854853,0,0,0.447749509444357,0,0,1.79515087581472,0.328014645699706,0.325378394664303,68.7283547690308,0,0,0,0,1.6068392984416,0.193341436584244,0.616194468458578,0.15350367472613,0.137836572484531,1.18162269355101,1.16013355131383,0,0.356128142586949,0.165284915360978,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0.539617372749944,0.54907405947211,0.235624804691373,0,0,0,0,0,1.05650146756755,0.545999645631943,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0.0982490410131212,0,0.709522128141196,4.64436797654861,2.96365403663912,0.379473173765715,0,0,0,0,73.4321646058877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51619630252546,0,0,0,0,0,0,1.9882952955326,0.984685914873589,0,0,0,1.79323189425963,1.10513566212459,1.0077309914171,0,0,0,0,0,0,1.479651084554,0,0,3.87733098438087,0.371072392647405,0,0,0,2.17499872630438,0,0,0,0,0,0,2.65722415744152,1.4471572635049,0,0.774054819518572,0.886642856860642,1.53569778007781,0,0,1.07730361905316,0,0,0,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.707660516026713,0.611030144933625,0,0,0,1.21322039365219,4.01288823649394,0.234264445725339,0,0,0,3.15667522279512,1.20990716048664,0,1.95878396848313,0,0,0,0,0,0,0,0,0,0,0,7.5132467344073,0,0,0,0,0.581934098930517,0,1.80784592624426,0,0,0.886351143382302,0,0,1.28071796843612,0,0,0,5.3194449337209,0,0,0,0,0,0.101998217636322,0,0.600420288709789,0.821432273351958,0,0,0,1.11712960508902,1.83328339209347,0.717873024576814,0.599037001496973,2.14613024068285,1.33902874465124,0,0.720599767084807,1.16495949527454,2.91497774536727,2.30764403467266,2.56133466645903,5.21665652028169,0,1.59045937961861,1.49823746722733,0,0,0,0,0,0.728994679896296,0,27.6608032620186,8.07800657278971,0,0,0,4.2881719582402,1.98627591109629,0,0.542999601753713,0,0,0,0,0.851940108927109,0.79318464064088,92.47445945087,53.0027555648885,1.93924434542326,1.98348902614035,0,0,0.427149650270779,0.314408610199332,0.414239055347196,0,0,0,0,18.4966053145621,14.7907037473393,16.8490067219904,9.50830629058433,0,0.886068179966986,0.244052529803926,0.3755727921195,2.29363678276028,1.99672292766334,1.36612086471044,0,0,0,0,0,0,0,0,0.934853239388898,0,0.568209015825267,1.76097531226803,0,0.457680136793847,0.151230923763239,0,0.443565449968902,0.63718706865481,0,0.310525913752519,0,0,0.521745061811734,0.450772826991655,0,0.406870733204662,0,0,0,0.796191777397232,0.400027764663154,0,0.673498977531838,0,0,0,0,0,0.694567422971502,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,1.28874165176289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899209151350433,0,0.319267718114302,0.205116364240755,0.252071696221718,0.276629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| ||
|short_description=p2@DMGDH | |||
}} | }} |
Latest revision as of 21:01, 18 September 2015
Short description: | p2@DMGDH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DMGDH_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000255189, ENST00000380311, ENST00000517853, ENST00000518477, ENST00000524206, ENST00000539598, ENST00000540686, NM_013391, uc003kfs.2, uc011ctf.1, uc011ctg.1_5end |
EntrezGene: | DMGDH |
HGNC: | 24475 |
UniProt: | Q9UI17F8W6P8E5RK15E5RG50E5RGI4F5H1C7B4E1J9B3KQ84 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 8.00e-13 | 12 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.87e-29 | 114 |
endocrine gland | 8.12e-13 | 35 |
liver | 2.09e-11 | 19 |
digestive gland | 2.09e-11 | 19 |
liver bud | 2.09e-11 | 19 |
digestive tract diverticulum | 1.85e-10 | 23 |
hepatic diverticulum | 1.82e-09 | 22 |
liver primordium | 1.82e-09 | 22 |
epithelium of foregut-midgut junction | 2.01e-09 | 25 |
anatomical boundary | 2.01e-09 | 25 |
hepatobiliary system | 2.01e-09 | 25 |
foregut-midgut junction | 2.01e-09 | 25 |
septum transversum | 2.01e-09 | 25 |
endocrine system | 6.23e-09 | 45 |
sac | 6.71e-09 | 26 |
gland of diencephalon | 3.89e-08 | 4 |
neuroendocrine gland | 3.89e-08 | 4 |
epithelial sac | 5.31e-08 | 25 |
brainstem | 7.59e-08 | 6 |
gland | 1.84e-07 | 59 |
abdominal segment of trunk | 1.86e-07 | 60 |
abdomen | 1.86e-07 | 60 |
exocrine gland | 4.73e-07 | 31 |
exocrine system | 4.73e-07 | 31 |
abdomen element | 5.62e-07 | 54 |
abdominal segment element | 5.62e-07 | 54 |