FFCP PHASE1:Hg19::chr6:169616632..169616678,-: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr6:169616632..169616678,- to FFCP PHASE1:Hg19::chr6:169616632..169616678,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:169616632..169616678,- | |||
|coexpression_cluster_id=C4183 | |||
|description=CAGE_peak_at_chr6:169616632..169616678,- | |||
|id=chr6:169616632..169616678,- | |||
|ontology_enrichment_celltype=CL:0000055!5.12e-16!180;CL:0000680!9.46e-10!57;CL:0000056!9.46e-10!57;CL:0000355!9.46e-10!57;CL:0000187!2.26e-09!54;CL:0000057!3.05e-09!75;CL:0002334!1.14e-08!12;CL:0000192!4.01e-08!42;CL:0000514!4.01e-08!42;CL:0000393!4.12e-08!60;CL:0000211!4.12e-08!60;CL:0000183!8.41e-08!59;CL:0000359!3.18e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.75e-09;32!CL:0002595;3.15e-09;5!CL:0000197;5.39e-09;6!CL:0000098;5.39e-09;6!CL:0002167;5.39e-09;6!CL:0002593;9.39e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,4.48e-10,32;CL:0002595,1.21e-09,5;CL:0000197,5.43e-09,6;CL:0000098,5.43e-09,6;CL:0002167,5.43e-09,6;CL:0000192,2.99e-08,43;CL:0000514,2.99e-08,43;CL:0000187,5.22e-07,55;CL:0002593,6.84e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.91e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.16e-10!83;UBERON:0002329!5.16e-10!83;UBERON:0003077!5.16e-10!83;UBERON:0003059!5.16e-10!83;UBERON:0007282!5.16e-10!83;UBERON:0009618!5.16e-10!83;UBERON:0007285!5.16e-10!83;UBERON:0001134!5.38e-10!61;UBERON:0002036!5.38e-10!61;UBERON:0003082!5.38e-10!61;UBERON:0002385!2.40e-09!63;UBERON:0001015!2.40e-09!63;UBERON:0000383!2.40e-09!63;UBERON:0004290!2.71e-09!70;UBERON:0000486!3.76e-08!82;UBERON:0004573!8.15e-08!33;UBERON:0004571!8.15e-08!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;6.07e-10;33!UBERON:0004571;6.07e-10;33!UBERON:0003834;3.15e-09;5!UBERON:0001533;3.15e-09;5!UBERON:0001637;1.65e-07;42!UBERON:0003509;1.65e-07;42!UBERON:0004572;1.65e-07;42!UBERON:0002456;9.39e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,1.72e-11,33;UBERON:0004571,1.72e-11,33;UBERON:0003834,1.21e-09,5;UBERON:0001533,1.21e-09,5;UBERON:0001637,2.05e-08,42;UBERON:0003509,2.05e-08,42;UBERON:0004572,2.05e-08,42;UBERON:0002049,2.44e-07,78;UBERON:0007798,2.44e-07,78;UBERON:0007500,2.96e-07,59;UBERON:0001981,2.96e-07,59;UBERON:0004537,2.96e-07,59;UBERON:0006965,2.96e-07,59;UBERON:0001134,6.38e-07,62;UBERON:0002036,6.38e-07,62;UBERON:0003082,6.38e-07,62;UBERON:0002456,6.84e-07,2;UBERON:0003513,6.98e-07,7;UBERON:0000055,8.44e-07,68 | |||
|phase1_expression=1.45342703416445,1.49870366723688,0.845726424575827,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0.662794751455832,0,1.20538905604795,1.46062018077475,1.95173119516203,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,0.670700859703636,0.255725123687061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.4061305025549,0.379891534993739,0.132409180813219,3.15520282823695,0,0.560677600142307,0,0.49333509683432,0,0.269421344139376,0,0.151357427644931,2.30470369792,0,0,0.570471821544449,0.298897361103602,0.117434498643765,0,0,0,0,0.103325781175765,1.18800285728205,3.4617370098998,0,1.43723628363248,0,0,0,0,1.22595118319608,6.61047459189026,0,0,0,0,0,0.103052529238439,0,0,0,0.0974370051611986,0.252433774244115,0.184099797284599,0,0.355009592516614,0.403008392910561,0,0,0,0.286804595389004,0.243947412259191,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0,0.109750285408626,0,0.502644862058154,0,0.325808305310325,0,0,0,0.587043471179108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0.102827492703324,0.600686115687835,0,0,0,0,1.29271715757778,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,1.58390374586686,0,0,0,0,0,0,0.239624855491583,1.14861935834114,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,19.9652027069575,5.17444067511769,6.93890626149313,18.1569193238705,0.601892199455438,9.09630016223939,0,0,0.737476674166813,0.260650843404249,0,0,0,0,0,0,0,0,2.48107807818777,0.767309866440312,0.280660094433074,1.02511319404561,0,3.21707842287215,1.48418066444991,0.616838775210622,0.887808626565635,0.246381468041427,1.55776328755086,0.232420756919918,0,0.40101294060657,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0.48335359146061,0,0.15350367472613,0.137836572484531,0,0,0,0.0890320356467374,0,0.192190067365106,0,0.6069466851333,0,0.31481234683064,0.6970372701606,0,1.06461206063404,0,0.18532421910392,1.00187420719394,0,0,1.71567174531442,0.511795582622668,4.70732886837312,0,0.78494864019923,0.179872457583315,0.54907405947211,0.117812402345686,0,1.58510321173008,2.94880919367287,0,1.94970791705028,2.11300293513511,0.136499911407986,0.282810863907425,0,1.65409603063837,1.99031692572366,0.438450885253763,0,0,0,0,0.845086807596724,0,0.0982490410131212,0,0,0.422215270595328,0.658589785919804,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,1.70481688083848,0,0,0,0.994147647766298,0.140669416410513,0.111308705022906,0,0,1.19548792950642,0,0,0,0,2.17727711363265,0,0,0,0.394573622547734,0,0,0.969332746095218,0.0927680981618513,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0,0,0,0.153900517007594,1.48124672601102,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.265372693510018,0,0.296521128680622,0,0,0.067401132980677,0,0.468528891450678,0,0,0,0,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0.51595809741485,0,0,0,0.0969890164884194,0,0.225980740780532,0.137041924646751,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,2.58217991539867,1.04602846312333,0,0,0,0.136905378891993,0,2.14882720709979,0,0.837847203816763,1.14580212005842,8.61447629492177,0,0.429226048136571,0.446342914883745,0,32.4269895188163,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0.0788057072991982,0,0,0,0,0.714695326373367,1.32418394073086,0,0,0,0,0,0,0.511164065356265,0.339936274560377,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0.606596470166591,0,0,0,0,0.298509605773748,0,0.554805861502613,0,0.251567901752575,0.889811221596536,0,1.66354016139563,0,0,0.955780602982214,0,1.39736661188633,2.48823724704513,3.72178400381193,2.08698024724694,0.300515217994437,1.14241563650639,0.406870733204662,0.727394636810238,0.322231671127465,0,0.796191777397232,0.400027764663154,0,0.673498977531838,0,0,0,0.260994291965212,0,1.62065732026684,0,0,0.926404341482917,1.53498834705095,0.176689145945881,0.578742114812744,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,2.86203915588077,0,0,0.705351887381368,0,0,0,0,0,0.252071696221718,0.0691572524642179,0.161475645631851,0,0,0,0,0,1.52552838186867,0,0.198916222116275,0.0752103283492573,0.20170506870352,0,0,0.655087670040387,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0.857440047187092,0,0.0657727735628491,0,0,0.078493092850514,0,0,5.47895232305697,0,0,0,0,0,0.173858272302579,2.40513409419076,0,0,0,0,0.473328002922261,0,0,0,0,0,0,0.098150233615243,0,0,0.102662806856247,2.3196288626764,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| 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| ||
|short_description=p@chr6:169616632..169616678,- | |||
}} | }} |
Latest revision as of 22:15, 30 July 2015
Short description: | p@chr6:169616632..169616678, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:169616632..169616678, - |
Coexpression cluster: | C4183_hepatic_Olfactory_Ewing_Cardiac_Osteoblast_heart_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 4.48e-10 | 32 |
smooth muscle cell of the subclavian artery | 1.21e-09 | 5 |
receptor cell | 5.43e-09 | 6 |
sensory epithelial cell | 5.43e-09 | 6 |
olfactory epithelial cell | 5.43e-09 | 6 |
smooth muscle cell | 2.99e-08 | 43 |
smooth muscle myoblast | 2.99e-08 | 43 |
muscle cell | 5.22e-07 | 55 |
smooth muscle cell of the internal thoracic artery | 6.84e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
systemic artery | 1.72e-11 | 33 |
systemic arterial system | 1.72e-11 | 33 |
thoracic segment blood vessel | 1.21e-09 | 5 |
subclavian artery | 1.21e-09 | 5 |
artery | 2.05e-08 | 42 |
arterial blood vessel | 2.05e-08 | 42 |
arterial system | 2.05e-08 | 42 |
vasculature | 2.44e-07 | 78 |
vascular system | 2.44e-07 | 78 |
epithelial tube open at both ends | 2.96e-07 | 59 |
blood vessel | 2.96e-07 | 59 |
blood vasculature | 2.96e-07 | 59 |
vascular cord | 2.96e-07 | 59 |
skeletal muscle tissue | 6.38e-07 | 62 |
striated muscle tissue | 6.38e-07 | 62 |
myotome | 6.38e-07 | 62 |
internal thoracic artery | 6.84e-07 | 2 |
trunk blood vessel | 6.98e-07 | 7 |
vessel | 8.44e-07 | 68 |