FFCP PHASE1:Hg19::chr6:56803460..56803471,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:56803460..56803471,- | |||
|coexpression_cluster_id=C479 | |||
|description=CAGE_peak_at_chr6:56803460..56803471,- | |||
|id=chr6:56803460..56803471,- | |||
|ontology_enrichment_celltype=CL:0002620!1.06e-07!23;CL:0002602!3.38e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000306;2.18e-08;4!CL:0002222;2.18e-08;4!CL:0002224;2.18e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,1.96e-08,4;CL:0002222,1.96e-08,4;CL:0002224,1.96e-08,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4231!7.31e-08!2;DOID:1907!7.31e-08!2;DOID:4929!2.46e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:5662;7.47e-30;1!DOID:4556;9.43e-11;3!DOID:3908;5.86e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,7.48e-30,1;DOID:4556,7.42e-11,3;DOID:3908,5.08e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0009568!3.38e-07!2;UBERON:0002216!3.38e-07!2;UBERON:0002209!3.38e-07!2;UBERON:0002213!3.38e-07!2;UBERON:0004267!3.38e-07!2;UBERON:0006444!3.38e-07!2;UBERON:0001995!3.38e-07!2;UBERON:0004715!3.38e-07!2;UBERON:0001468!3.38e-07!2;UBERON:0001130!3.38e-07!2;UBERON:0001066!3.38e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;2.05e-29;1!UBERON:0010077;2.18e-08;4!UBERON:0005389;2.18e-08;4!UBERON:0000484;2.18e-08;4!UBERON:0000965;2.18e-08;4!UBERON:0001803;2.18e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,2.37e-29,1;UBERON:0010077,1.96e-08,4;UBERON:0005389,1.96e-08,4;UBERON:0000484,1.96e-08,4;UBERON:0002546,1.96e-08,4;UBERON:0000965,1.96e-08,4;UBERON:0001803,1.96e-08,4;UBERON:0003073,1.96e-08,4;UBERON:0005426,1.96e-08,4 | |||
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| ||
|short_description=p@chr6:56803460..56803471,- | |||
}} | }} |
Latest revision as of 02:34, 31 July 2015
Short description: | p@chr6:56803460..56803471, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:56803460..56803471, - |
Coexpression cluster: | C479_pleomorphic_mesothelioma_cholangiocellular_melanoma_Saos2_serous_glioblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 1.96e-08 | 4 |
vertebrate lens cell | 1.96e-08 | 4 |
lens epithelial cell | 1.96e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 2.37e-29 | 1 |
cuboidal epithelium | 1.96e-08 | 4 |
transparent eye structure | 1.96e-08 | 4 |
simple cuboidal epithelium | 1.96e-08 | 4 |
cranial placode | 1.96e-08 | 4 |
lens of camera-type eye | 1.96e-08 | 4 |
epithelium of lens | 1.96e-08 | 4 |
lens placode | 1.96e-08 | 4 |
lens vesicle | 1.96e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 7.48e-30 | 1 |
lung large cell carcinoma | 7.42e-11 | 3 |
non-small cell lung carcinoma | 5.08e-07 | 5 |