FFCP PHASE1:Hg19::chr6:83075622..83075644,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:83075622..83075644,+ to FFCP PHASE1:Hg19::chr6:83075622..83075644,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:83075622..83075644,+ | |||
|description=CAGE_peak_at_chr6:83075622..83075644,+ | |||
|id=chr6:83075622..83075644,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.71e-13!180;CL:0000548!1.16e-08!679;CL:0000004!1.16e-08!679;CL:0000255!1.16e-08!679;CL:0000057!2.35e-08!75;CL:0000012!2.69e-08!682 | |||
|ontology_enrichment_celltype_v019=CL:0000134;3.66e-08;55!CL:0000048;7.25e-07;58!CL:0002561;7.80e-07;2!CL:0002583;7.80e-07;2!CL:0002593;7.80e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002561,9.23e-07,2;CL:0000569,9.37e-07,4;CL:0000011,9.37e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.93e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.76e-19;14!DOID:120;4.98e-13;27!DOID:193;6.14e-12;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.25e-19,14;DOID:120,5.16e-13,27;DOID:193,6.34e-12,29 | |||
|ontology_enrichment_uberon=UBERON:0000486!2.36e-09!82;UBERON:0000914!5.58e-07!83;UBERON:0002329!5.58e-07!83;UBERON:0003077!5.58e-07!83;UBERON:0003059!5.58e-07!83;UBERON:0007282!5.58e-07!83;UBERON:0009618!5.58e-07!83;UBERON:0007285!5.58e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0002118;1.62e-15;5!UBERON:0000992;1.40e-13;13!UBERON:0003134;6.52e-11;33!UBERON:0000991;7.96e-10;21!UBERON:0000474;8.42e-10;37!UBERON:0003100;3.13e-08;41!UBERON:0002119;5.15e-07;4!UBERON:0005933;7.80e-07;2!UBERON:0005942;7.80e-07;2!UBERON:0002456;7.80e-07;2!UBERON:0005932;7.80e-07;2!UBERON:0005156;7.87e-07;59!UBERON:0000990;7.87e-07;59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002118,1.15e-15,5;UBERON:0000992,8.82e-14,13;UBERON:0005156,5.40e-13,59;UBERON:0000990,5.40e-13,59;UBERON:0003134,3.25e-12,37;UBERON:0000474,3.25e-12,37;UBERON:0003100,1.07e-10,41;UBERON:0003133,4.45e-10,48;UBERON:0000991,5.12e-10,21;UBERON:0009196,5.12e-10,21;UBERON:0009117,5.12e-10,21;UBERON:0005564,5.12e-10,21;UBERON:0004176,1.77e-09,22;UBERON:0002119,3.75e-07,4;UBERON:0005933,9.23e-07,2;UBERON:0005942,9.23e-07,2;UBERON:0005932,9.23e-07,2 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0,0,0.446961094427288,1.74467704820074,2.53299878168311,0,0,0.245733936501509,0.697801167972428,0.218441372130172,0,0.123766352960047,0.662794751455832,5.3786011716142,1.20538905604795,1.46062018077475,0,0.369363174230364,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0.361439152384566,0.50133791063589,0.869079113764942,0,0,0,0,0,0,0.364295288292542,1.85392221392215,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0.183201743930407,0,0,0,1.49091585508596,0.379891534993739,0.132409180813219,2.86836620748814,0.354668382198357,0.560677600142307,0,0,0,0.404132016209064,0,0.151357427644931,0,0,2.80944069147288,0,1.04614076386261,1.17434498643765,0.647491777472526,0,0.408308342509787,1.22834317311768,0,1.18800285728205,0.247266929278557,0.910161361938026,0,0,0.500474079487857,0,0,0.919463387397059,0,0.226864366320042,0.358779271377724,0.213557388818567,0.211931901159562,0.900273288253207,1.03052529238439,0,0.18611685633159,0,0.487185025805993,0.504867548488229,0.0920498986422993,0.161646056818812,0.355009592516614,0.10075209822764,0,0.193260853163297,0,0.860413786167011,0.853815942907168,0.132529768321485,0.69716365721711,0.725627385107593,0.756962552626885,0,0,3.21620469096443,0,1.39310378409594,2.16563844500876,0.354920400119532,0.168584690078102,0.482022059766964,0,0.217879444092406,0,0.269662616320329,0.196221465125346,0.769494313892781,0,0,0.8231480226628,0,0,0,0,0,0,0.171567810298526,0.219500570817251,0,1.40740561376283,0.185176890317059,0,0,0,0.115930404975077,0,0,0,0,0,0.858486162094873,0,0,0,0,0.16798212819886,0.567100388969546,0.358234090811393,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0,0.258543431515556,0,0.845302752556,0,1.04007436911366,0.257207374262142,0,0.266422179016099,0.57191197463259,0.542621605391443,0,0,0,0.791951872933429,0,0,0.299918973546171,0,0,0,0.479249710983165,1.14861935834114,0,0.579125226670317,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0.271265023699736,0.207970861530807,3.39015078714607,0.630809660135739,0.234282829985426,0,0,1.03473071292505,0.664225598535437,0,0.434418072340414,0,0.686286847621712,0,0,0,0,0,1.5119514666484,0.248107807818777,0.153461973288062,0.841980283299221,0.128139149255701,0.511707249066704,0.64341568457443,0,2.46735510084249,1.06537035187876,0.328508624055237,1.55776328755086,1.74315567689939,0,1.40354529212299,2.30202472339741,0.459257792658427,1.63882051206045,1.96686622439136,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0.328014645699706,0,0,0.183138929636687,0.082509499920588,0,0.650060246036521,1.6068392984416,0.193341436584244,0.770243085573222,0.614014698904518,0.137836572484531,0.214840489736547,0.725083469571143,0.681813019328807,0.0890320356467374,0.661139661443912,0.768760269460425,0.510450849978337,1.51736671283325,0.929691098594572,5.35180989612088,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,1.56989728039846,0.179872457583315,0.54907405947211,0.353437207037059,0.202182481573316,1.58510321173008,0.421258456238981,0,2.43713489631284,1.05650146756755,0.272999822815972,0.989838023675989,0,0.551365343546124,0.66343897524122,0.438450885253763,0,1.31178950409327,0,0.30982349809975,0.563391205064483,0.143411352204052,0.0982490410131212,0,0,1.89996871767898,1.31717957183961,0,0.349934720244983,0.0962221127255121,0,0,0,0.86101074534246,1.68471475667626,3.10401107475673,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0.307160702099232,0,0,0.445234820091624,0,0,0.19924798825107,0,0,0.102268682502155,0,0.311039587661807,0,0,0,0.295930216910801,0,0,0,0.185536196323703,0,0.260427761085233,0,0,0.568967241427498,0,0.472775363535873,0,0,0,0.885741385813839,0.120596438625408,0,0,0,0,0,0.139423744278603,0,0.227884111694002,0,0,0,0.638002319463839,0.183195186803725,2.13213910407454,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0.468528891450678,0,0,0,0.394584402849391,0,0,0,0.150323419414493,0,0,0.330991955875499,0,0,0,0,1.04135843001079,0,0.0870592065804026,0.17472666824203,0,0.483781656445426,0.438535902517113,0.246346371159628,0.387956065953678,0,1.35588444468319,0.274083849293502,0.397429223405979,0,0.195551382734803,0,0.213452994739353,0.999048047910651,0,0,2.23073497220554,0.288109595976299,0.124252535565433,0,0,0.104602846312333,0.101998217636322,0,0.600420288709789,0,0,0.859530882839914,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,0,0,0.482259445395058,0.137539436597234,2.49264202817511,0,0,0,0,0,0.0524545881349981,0.105600336519406,0,0.383830394638891,0,0.662091970365432,0,2.17199840701485,0.8642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| ||
|short_description=p@chr6:83075622..83075644,+ | |||
}} | }} |
Latest revision as of 03:29, 31 July 2015
Short description: | p@chr6:83075622..83075644, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:83075622..83075644, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
outer root sheath cell | 9.23e-07 | 2 |
cardiac mesenchymal cell | 9.37e-07 | 4 |
migratory trunk neural crest cell | 9.37e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
right ovary | 1.15e-15 | 5 |
female gonad | 8.82e-14 | 13 |
reproductive structure | 5.40e-13 | 59 |
reproductive system | 5.40e-13 | 59 |
female reproductive organ | 3.25e-12 | 37 |
female reproductive system | 3.25e-12 | 37 |
female organism | 1.07e-10 | 41 |
reproductive organ | 4.45e-10 | 48 |
gonad | 5.12e-10 | 21 |
indifferent external genitalia | 5.12e-10 | 21 |
indifferent gonad | 5.12e-10 | 21 |
gonad primordium | 5.12e-10 | 21 |
external genitalia | 1.77e-09 | 22 |
left ovary | 3.75e-07 | 4 |
hair root sheath | 9.23e-07 | 2 |
hair outer root sheath | 9.23e-07 | 2 |
bulb of hair follicle | 9.23e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.25e-19 | 14 |
female reproductive organ cancer | 5.16e-13 | 27 |
reproductive organ cancer | 6.34e-12 | 29 |