FFCP PHASE1:Hg19::chr7:116312598..116312603,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:116312598..116312603,+ to FFCP PHASE1:Hg19::chr7:116312598..116312603,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4233 | |EntrezGene=4233 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7029 | |HGNC=7029 | ||
|TSSclassifier=strong | |||
|UniProt=A1L467,P08581 | |UniProt=A1L467,P08581 | ||
|association_with_transcript=139bp_to_ENST00000318493,NM_000245,NM_001127500,uc003vii.1,uc003vij.2,uc010lkg.2,uc010lkh.2_5end | |||
|cluster_id=chr7:116312598..116312603,+ | |||
|coexpression_cluster_id=C2838 | |||
|description=CAGE_peak_15_at_MET_5end | |||
|id=chr7:116312598..116312603,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.28e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:0002566;2.54e-11;1!CL:0000148;1.14e-09;10!CL:0000147;4.81e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002566,1.78e-11,1;CL:0000148,1.11e-09,10;CL:0000541,1.11e-09,10;CL:0000147,4.72e-07,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.88e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000956!1.63e-13!25;UBERON:0000203!1.63e-13!25;UBERON:0002619!2.98e-13!22;UBERON:0001869!1.13e-11!32;UBERON:0001893!1.24e-11!34;UBERON:0001950!1.93e-11!20;UBERON:0002791!6.70e-11!33;UBERON:0002020!2.11e-09!34;UBERON:0003528!2.11e-09!34;UBERON:0002780!2.44e-09!41;UBERON:0001890!2.44e-09!41;UBERON:0006240!2.44e-09!41;UBERON:0003080!5.99e-09!42;UBERON:0003056!3.74e-08!61;UBERON:0001017!5.47e-07!82;UBERON:0005743!6.89e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;7.13e-12;20!UBERON:0002902;2.54e-11;1!UBERON:0007195;2.54e-11;1!UBERON:0009899;2.54e-11;1!UBERON:0002619;7.86e-11;22!UBERON:0000956;1.44e-09;25!UBERON:0000203;1.44e-09;25!UBERON:0002021;4.22e-09;5!UBERON:0001893;9.93e-08;34!UBERON:0001869;3.46e-07;32!UBERON:0003528;5.69e-07;34!UBERON:0002020;5.69e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,5.67e-12,20;UBERON:0002902,1.18e-11,1;UBERON:0009899,1.18e-11,1;UBERON:0007195,4.01e-11,1;UBERON:0002619,6.38e-11,22;UBERON:0000956,1.20e-09,25;UBERON:0000203,1.20e-09,25;UBERON:0002021,3.12e-09,5;UBERON:0002791,1.45e-07,32;UBERON:0001869,1.45e-07,32;UBERON:0003528,4.00e-07,34;UBERON:0002020,4.00e-07,34;UBERON:0001893,4.00e-07,34 | |||
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|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.43917392846563,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860509862246441,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538168907066586,0,0,0.900273288253207,0.103052529238439,0.257640540045629,0,0.843881661206331,0.194874010322397,0.252433774244115,0,0.161646056818812,1.42003837006646,0.201504196455281,0,0,0.272746120590835,0.286804595389004,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0.473227200159376,0,0,0.441175890929576,0,0.71181185733329,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0.201057944823262,0.185176890317059,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0.503946384596579,0.425325291727159,0.179117045405697,0.581267877027924,0,0,0,0,0,0,1.46045156871989,0.381988425558278,1.17217447210047,0,0,2.40274446275134,0.857479297891735,0,0,0,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0.271265023699736,0,0.178428988797162,0.157702415033935,0.234282829985426,0,0,1.03473071292505,0.664225598535437,0.368738337083406,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232420756919918,0,0.601519410909855,0.276242966807689,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06337790121334,0.308097234229289,0.15350367472613,0,0.107420244868274,0,0,0.356128142586949,0.330569830721956,0,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0.294747123039363,0,0.709522128141196,0,0,0,0,0,0,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,1.22864280839693,0.994147647766298,0,0,0,0,0,0,0.251932747854276,0,0,0,0.179736702294654,0,0,0,0,1.11136990144637,1.93866549219044,0.649376687132959,0,0,0,0,0,0.762760950878299,0.945550727071745,0,0,0,0,0,0,0,0,0.438770794307945,0.10893846351899,0,0,0,0,0.0897576444097721,0.108647371922008,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0.843992258112108,0.163232808159148,0,0.432777279484182,0,0.0884575645033392,0,0,0,0.208843899010911,0.202203398942031,0,0,0,0.19566461893209,0,0,0,0.30607276163049,0.126373159256976,0.150323419414493,0,0,0.330991955875499,0,0,0,0,0,0.195984794828755,0.261177619741208,0,0,0,0.146178634172371,0.164230914106418,0,0,0.225980740780532,0.274083849293502,0,1.01297273529406,0,0.64127056201227,0,0,0.864542502924636,0,0,0.14405479798815,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0.0824158583811665,0.202210631562555,0.0984274815147488,0,0.795229689809303,0.544813624446302,0,0.137539436597234,0.415440338029185,0,0,0.971992906528395,0,0.157611414598396,0.157363764404994,0.105600336519406,0,0,0,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0,0,0.171086837884329,1.40963004463334,0.106787412567695,0.471612915298998,0.414239055347196,0,0,0,0,0,0,0.306345576763462,0,0,0.886068179966986,1.83039397352945,0,0,0,0,0.138348634936231,0.124980407962107,0.151649117541648,0,0.235265819698172,0,0.434763085832475,0,0,0,0,0,0.889811221596536,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0.226705925512272,0.694567422971502,0,0,0,0,0.176689145945881,0.964570191354574,0.337884881306145,0,0,0,0.138258436151731,0,0,0,0,0.245772908753719,0,0,0,0.344429959321631,0.567515953566836,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385375350578757,9.91876034279095,0.478901577171454,0.615349092722265,0,1.86724581653388,0.322951291263702,0,0,0,0,0.462102664601353,0,0,0,0,0,0,0,0,0.295712172434091,0.472763092328763,1.56215619722769,0.206686796501184,0.253663240775627,0,0,0,0.351742488719241,1.66091155931474,0,0,0,0.227662191351298,0.354809480650555,0,0.171488009437418,0.0679697329768317,0.855046056317038,0,0,0,0,0,0,0.431855182437243,0.9555033757741,0.78624198594322,0,0,0.521574816907738,0,0.414432328326074,0.17071847709395,0.691259661814092,0,0.118332000730565,0.255640214277473,0,0.68732060563215,0.31020638566432,0,0,0.098150233615243,0.121917924982269,0,0.410651227424988,1.1598144313382,0,0,0.596852325484105,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0.535661815816973,0.705789743431384,1.44434460040503,0,0,0,0,0.679914901909147,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448527450322454,0.31823579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| ||
|short_description=p15@MET | |||
}} | }} |
Latest revision as of 18:22, 15 September 2015
Short description: | p15@MET |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_MET_5end |
Coexpression cluster: | C2838_occipital_medial_squamous_gastric_parietal_frontal_Melanocyte |
Association with transcript: | 139bp_to_ENST00000318493, NM_000245, NM_001127500, uc003vii.1, uc003vij.2, uc010lkg.2, uc010lkh.2_5end |
EntrezGene: | MET |
HGNC: | 7029 |
UniProt: | A1L467P08581 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
dark melanocyte | 1.78e-11 | 1 |
melanocyte | 1.11e-09 | 10 |
melanoblast | 1.11e-09 | 10 |
pigment cell | 4.72e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
neocortex | 5.67e-12 | 20 |
occipital pole | 1.18e-11 | 1 |
pole of cerebral hemisphere | 1.18e-11 | 1 |
stroma of bone marrow | 4.01e-11 | 1 |
regional part of cerebral cortex | 6.38e-11 | 22 |
cerebral cortex | 1.20e-09 | 25 |
pallium | 1.20e-09 | 25 |
occipital lobe | 3.12e-09 | 5 |
regional part of telencephalon | 1.45e-07 | 32 |
cerebral hemisphere | 1.45e-07 | 32 |
brain grey matter | 4.00e-07 | 34 |
gray matter | 4.00e-07 | 34 |
telencephalon | 4.00e-07 | 34 |