FFCP PHASE1:Hg19::chr7:29186174..29186188,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:29186174..29186188,+ to FFCP PHASE1:Hg19::chr7:29186174..29186188,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1124 | |EntrezGene=1124 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1944 | |HGNC=1944 | ||
|TSSclassifier=strong | |||
|UniProt=C9JQ94 | |UniProt=C9JQ94 | ||
|association_with_transcript=0bp_to_ENST00000439384_5end | |||
|cluster_id=chr7:29186174..29186188,+ | |||
|description=CAGE_peak_11_at_CHN2_5end | |||
|id=chr7:29186174..29186188,+ | |||
|ontology_enrichment_celltype=CL:0002194!8.46e-11!63;CL:0000576!8.46e-11!63;CL:0000040!8.46e-11!63;CL:0000559!8.46e-11!63;CL:0002009!1.02e-10!65;CL:0000839!5.38e-10!70;CL:0000557!8.91e-09!71;CL:0000766!2.09e-08!76 | |||
|ontology_enrichment_celltype_v019=CL:0000875;3.27e-07;3!CL:0002396;3.27e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,2.45e-08,59;CL:0000576,2.45e-08,59;CL:0000040,2.45e-08,59;CL:0000559,2.45e-08,59;CL:0000763,2.63e-08,108;CL:0000049,2.63e-08,108;CL:0002393,2.64e-08,9;CL:0002397,2.64e-08,9;CL:0002009,5.41e-08,61;CL:0000766,9.65e-08,72;CL:0000037,3.08e-07,168;CL:0000839,3.16e-07,66;CL:0000875,4.26e-07,3;CL:0002396,4.26e-07,3;CL:0000557,4.36e-07,67;CL:0002032,8.12e-07,161;CL:0000837,8.12e-07,161 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!3.12e-07!143;DOID:3095!5.36e-07!22;DOID:2994!5.36e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:171;7.14e-12;10!DOID:3095;3.25e-07;22!DOID:2994;3.25e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,5.23e-12,10;DOID:3095,3.24e-07,22;DOID:2994,3.24e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.15e-09!115;UBERON:0001474!1.67e-07!86;UBERON:0002371!5.27e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;3.95e-11;4!UBERON:0000923;3.95e-11;4!UBERON:0010316;3.95e-11;4!UBERON:0005291;3.95e-11;4!UBERON:0002050;5.42e-09;5!UBERON:0005423;5.42e-09;5!UBERON:0005383;5.93e-07;3!UBERON:0005382;5.93e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005383,7.58e-07,3;UBERON:0005382,7.58e-07,3 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0.376627918784408,0,0,0,0,0.767658796194425,0,0,0,0,0,0,0.293600439334847,0,0.802177789880567,1.08505435357926,0.895661896959697,1.29557466407592,0.257575567634187,0.145398238779565,0,0,0,1.23350366406548,0,0,0.512321413058201,0.47296445977717,0,0.645484683583826,0,0.188242339542605,0.272906150057846,0.674170453335254,0.306083892370903,0,0,0,0,0,0,0,0.622822248995575,0.75374599577023,0,0.217188844705117,0,0.368277635987565,0.316462387440884,1.90129757680748,0.425208599930087,0.838634582033504,1.12328631146495,0,2.08943262706204,1.14005097496499,0.39783335439818,2.19196984517561,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661743720148475,0,0,0.261958150995425,0,0,0.324547393654683,1.39303789839414,0.26591592103773,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853815942907168,0.132529768321485,0.232387885739037,0.207322110030741,0.252320850875628,1.09493207722749,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0.435758888184812,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,2.20731549707325,0.614942192715568,0.343135620597051,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,1.47730203652438,0.702012795417713,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0,0.22001485746285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.399891964728228,0,1.00451418286425,0,0,0,0,0.289562613335158,0,0.358121926479791,0,0,0,0,0.508189248444927,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0,0,0,0,0,0,0,0.256278298511402,0.511707249066704,0,0,0,0,0,0,0,0.604297247958111,0,0,0,0,0,0,0,0,0,0.211103257785751,0,0.170093705276516,0,0,0,0,0.254876273045038,0.831076008928724,0,0.657779629937804,0.522870902049801,0.256450125116389,0,0,0.103041011647722,0.366277859273374,0.82509499920588,0,0,0,0.096670718292122,0.308097234229289,0.15350367472613,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0.569647187174163,0.476463550915578,0.411362273086194,0,0,0,0,0,0,0.185803175125719,0,1.42283686696828,1.75368900001705,0,0,0,0,2.52717460302113,0,0,0,0,0,0,1.70338495076131,0,0.307240764308458,0.447352215784832,1.00109485027145,0.976940477010201,0,0,2.43410110628385,0,0,0,0.146508179271894,0,0,0,0,0.296964680832639,0,0,0.703347082052564,0,0,0,0,0.276283915531148,0,0,0.369254416383208,0,0.0898683511473268,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0.291604613383254,1.90987494426621,0.885741385813839,1.32656082487949,0,0.110579259931225,0,0.438770794307945,0,0.41827123283581,0.230850775511391,0.113942055847001,0,0.807818799687949,0.325942115766024,0,0,0,0,0,1.82832850090172,0,0,0,0,0.476809736941136,0,0.816164040795739,0.424059214301822,0,0,0.0884575645033392,0,0,0,0,0.337005664903385,0,0.234264445725339,0.91227394607833,1.56531695145672,0,0,0,0,0.31593289814244,0.901940516486955,0.933193722575224,0,0,0.313932918407225,0,0.284609546029793,0,0.347119476670262,0,0,0.698906672968121,0.171986032471617,0.290268993867255,0.438535902517113,0,0.0969890164884194,0,0,0,0,0.253243183823515,0,0,0,0.19980960958213,0,0,1.20116498503375,0,2.73355578243952,0,0,0,0,1.15580235960608,0.600420288709789,0.410716136675979,0,0,0,0,0.458320848023367,0,0.798716001995964,0,0.446342914883745,1.2764859772478,0,1.16495949527454,1.10296455230113,0.659326867049332,0.337017719270924,0.295282444544246,0,0.795229689809303,0,0.964518890790115,0.687697182986169,0.415440338029185,0.2249738915515,0,0.182248669974074,0,0.472834243795189,0.681909645754975,0.422401346077626,0.179287339332845,0.575745591958336,0,0,0,0,0,0.326587360109409,0,0,0,0.113312091520126,0,0,0,0.39669780522807,0,0,0.106787412567695,0,0.414239055347196,0,0,3.65377795142688,1.91502377331055,0,0.2506898940227,0,0,0.157054096250234,0,0.244052529803926,0,0,0.443716206147409,0.18628920882415,0,0.499921631848426,0.303298235083296,0.285465333544967,0,0,0.434763085832475,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0.150257608997218,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0.453411851024545,0,0.489473409012935,0,0,1.09642024789354,0.353378291891762,0,0,0,0,0.911579868532147,0,0,0,0,0.655219697692825,0,0,0,0.853533837553127,0,0,0,0,0,0,0.862598491173454,4.71797825567689,0,3.3946505990805,1.48802444071178,1.61116493536703,3.35186950783946,0,0.0788617450012534,0,0,0,0.513833800771676,0,0,0,0.252071696221718,0.138314504928436,0.322951291263702,0,0.0981477185010256,0,0.917142992608395,0.115525666150338,0,0,1.79024599904647,0.676892955143315,0.60511520611056,0,0,0.655087670040387,0,0.202612753855184,0.781078098613847,0.20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| ||
|short_description=p11@CHN2 | |||
}} | }} |
Latest revision as of 03:51, 18 September 2015
Short description: | p11@CHN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_CHN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000439384_5end |
EntrezGene: | CHN2 |
HGNC: | 1944 |
UniProt: | C9JQ94 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 2.45e-08 | 59 |
monocyte | 2.45e-08 | 59 |
monoblast | 2.45e-08 | 59 |
promonocyte | 2.45e-08 | 59 |
myeloid cell | 2.63e-08 | 108 |
common myeloid progenitor | 2.63e-08 | 108 |
intermediate monocyte | 2.64e-08 | 9 |
CD14-positive, CD16-positive monocyte | 2.64e-08 | 9 |
macrophage dendritic cell progenitor | 5.41e-08 | 61 |
myeloid leukocyte | 9.65e-08 | 72 |
hematopoietic stem cell | 3.08e-07 | 168 |
myeloid lineage restricted progenitor cell | 3.16e-07 | 66 |
non-classical monocyte | 4.26e-07 | 3 |
CD14-low, CD16-positive monocyte | 4.26e-07 | 3 |
granulocyte monocyte progenitor cell | 4.36e-07 | 67 |
hematopoietic oligopotent progenitor cell | 8.12e-07 | 161 |
hematopoietic multipotent progenitor cell | 8.12e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
caudate-putamen | 7.58e-07 | 3 |
dorsal striatum | 7.58e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 5.23e-12 | 10 |
germ cell and embryonal cancer | 3.24e-07 | 22 |
germ cell cancer | 3.24e-07 | 22 |