FFCP PHASE1:Hg19::chr7:99716952..99716990,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:99716952..99716990,- to FFCP PHASE1:Hg19::chr7:99716952..99716990,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6878 | |EntrezGene=6878 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11540 | |HGNC=11540 | ||
|TSSclassifier=strong | |||
|UniProt=P49848,C9JHQ8,F8WEJ7,C9J088,C9JTY6,E5RKA5,E5RHA1 | |UniProt=P49848,C9JHQ8,F8WEJ7,C9J088,C9JTY6,E5RKA5,E5RHA1 | ||
|association_with_transcript=0bp_to_ENST00000344095,ENST00000417349,ENST00000418432,ENST00000421980,ENST00000452041,ENST00000452438,ENST00000460673,ENST00000493322,ENST00000497233,ENST00000520135,ENST00000523306,uc003uti.2,uc003utj.2,uc003utk.2,uc003utl.2,uc003utm.2,uc003utn.1_5end | |||
|cluster_id=chr7:99716952..99716990,- | |||
|description=CAGE_peak_1_at_TAF6_5end | |||
|id=chr7:99716952..99716990,- | |||
|ontology_enrichment_celltype=CL:0000066!3.08e-14!254;CL:0000055!1.38e-12!180;CL:0002321!8.98e-11!248;CL:0000220!2.36e-10!246;CL:0000222!8.77e-07!119 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.41e-14,253;CL:0002321,1.01e-10,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!1.03e-10!143;DOID:14566!1.61e-08!239;DOID:162!3.35e-08!235;DOID:305!7.27e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.03e-10,143;DOID:14566,1.61e-08,239;DOID:162,3.35e-08,235;DOID:305,7.27e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0000119!6.70e-15!312;UBERON:0000483!1.45e-14!309;UBERON:0000475!1.01e-13!365;UBERON:0000481!1.09e-09!347;UBERON:0000064!1.14e-08!219;UBERON:0002100!2.09e-08!216;UBERON:0005256!4.70e-08!143;UBERON:0000490!4.58e-07!138;UBERON:0000477!5.61e-07!286;UBERON:0006554!7.75e-07!44 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,6.83e-14,309;UBERON:0000483,1.44e-13,306;UBERON:0002100,5.47e-09,199;UBERON:0006554,3.43e-08,47;UBERON:0001008,7.48e-08,48;UBERON:0003104,1.07e-07,160;UBERON:0009142,1.07e-07,160;UBERON:0000490,1.90e-07,148 | |||
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| ||
|short_description=p1@TAF6 | |||
}} | }} |
Latest revision as of 17:32, 24 September 2015
Short description: | p1@TAF6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TAF6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000344095, ENST00000417349, ENST00000418432, ENST00000421980, ENST00000452041, ENST00000452438, ENST00000460673, ENST00000493322, ENST00000497233, ENST00000520135, ENST00000523306, uc003uti.2, uc003utj.2, uc003utk.2, uc003utl.2, uc003utm.2, uc003utn.1_5end |
EntrezGene: | TAF6 |
HGNC: | 11540 |
UniProt: | P49848C9JHQ8F8WEJ7C9J088C9JTY6E5RKA5E5RHA1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.41e-14 | 253 |
embryonic cell | 1.01e-10 | 250 |
Ontology term | p-value | n |
---|---|---|
cell layer | 6.83e-14 | 309 |
epithelium | 1.44e-13 | 306 |
trunk | 5.47e-09 | 199 |
urinary system structure | 3.43e-08 | 47 |
renal system | 7.48e-08 | 48 |
mesenchyme | 1.07e-07 | 160 |
entire embryonic mesenchyme | 1.07e-07 | 160 |
unilaminar epithelium | 1.90e-07 | 148 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.03e-10 | 143 |
disease of cellular proliferation | 1.61e-08 | 239 |
cancer | 3.35e-08 | 235 |
carcinoma | 7.27e-07 | 106 |