FFCP PHASE1:Hg19::chr9:79792562..79792597,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:79792562..79792597,+ to FFCP PHASE1:Hg19::chr9:79792562..79792597,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23230 | |EntrezGene=23230 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1908 | |HGNC=1908 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-67bp_to_ENST00000545365_5end | |||
|cluster_id=chr9:79792562..79792597,+ | |||
|description=CAGE_peak_3_at_VPS13A_5end | |||
|id=chr9:79792562..79792597,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.66e-19!53;CL:0000051!1.66e-19!53;CL:0000838!6.47e-19!52;CL:0000945!1.70e-12!24;CL:0000826!1.70e-12!24;CL:0000236!3.53e-09!14;CL:0000084!1.98e-07!25;CL:0000827!1.98e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.19e-13;24!CL:0000542;1.42e-12;53!CL:0000236;4.49e-10;13!CL:0000084;6.60e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.92e-21,53;CL:0000051,2.92e-21,53;CL:0000838,1.33e-20,52;CL:0000945,2.12e-13,24;CL:0000826,2.12e-13,24;CL:0000236,3.94e-10,14;CL:0000084,4.27e-08,25;CL:0000827,4.27e-08,25;CL:0000988,6.75e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000051;1.42e-12;53 | |||
|ontology_enrichment_disease=DOID:0050686!1.91e-12!137;DOID:162!1.14e-10!235;DOID:14566!1.06e-09!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,3.99e-11,137;DOID:162,2.22e-08,235;DOID:14566,1.11e-07,239;DOID:2531,7.80e-07,51;DOID:0060083,7.80e-07,51 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p3@VPS13A | |||
}} | }} |
Latest revision as of 22:17, 17 September 2015
Short description: | p3@VPS13A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_VPS13A_5end |
Coexpression cluster: | NA |
Association with transcript: | -67bp_to_ENST00000545365_5end |
EntrezGene: | VPS13A |
HGNC: | 1908 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.92e-21 | 53 |
common lymphoid progenitor | 2.92e-21 | 53 |
lymphoid lineage restricted progenitor cell | 1.33e-20 | 52 |
lymphocyte of B lineage | 2.12e-13 | 24 |
pro-B cell | 2.12e-13 | 24 |
B cell | 3.94e-10 | 14 |
T cell | 4.27e-08 | 25 |
pro-T cell | 4.27e-08 | 25 |
hematopoietic cell | 6.75e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 3.99e-11 | 137 |
cancer | 2.22e-08 | 235 |
disease of cellular proliferation | 1.11e-07 | 239 |
hematologic cancer | 7.80e-07 | 51 |
immune system cancer | 7.80e-07 | 51 |