FFCP PHASE1:Mm9::chr10:41678932..41678936,+: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr10:41678932..41678936,+ to FFCP PHASE1:Mm9::chr10:41678932..41678936,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:41678932..41678936,+ | |||
|description=CAGE_peak_at_chr10:41678932..41678936,+ | |||
|id=chr10:41678932..41678936,+ | |||
|ontology_enrichment_celltype=CL:0002563!2.96e-23!9;CL:0002251!2.96e-23!9;CL:0000239!2.18e-14!6;CL:0000677!2.18e-14!6;CL:0000212!2.18e-14!6;CL:0000584!2.18e-14!6;CL:0002076!1.77e-13!15;CL:0000075!2.70e-12!7;CL:0002250!1.38e-10!3;CL:0000223!8.34e-10!20;CL:0000066!1.31e-09!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.09e-16,9;CL:0002251,2.09e-16,9;CL:0002076,7.99e-10,15;CL:0000239,8.61e-10,6;CL:0000677,8.61e-10,6;CL:0000584,8.61e-10,6;CL:0000075,1.83e-08,7;CL:0002250,2.06e-08,3;CL:0000066,4.21e-08,25;CL:0000223,2.43e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!5.59e-36!15;UBERON:0001242!2.29e-30!13;UBERON:0000060!2.29e-30!13;UBERON:0001262!2.29e-30!13;UBERON:0004786!2.29e-30!13;UBERON:0000160!1.56e-25!43;UBERON:0003350!2.96e-23!9;UBERON:0004808!2.96e-23!9;UBERON:0001277!2.96e-23!9;UBERON:0004923!1.53e-21!24;UBERON:0005409!1.40e-19!59;UBERON:0000485!8.18e-19!11;UBERON:0001007!7.69e-10!128;UBERON:0001555!7.69e-10!128;UBERON:0007026!7.69e-10!128;UBERON:0004119!1.28e-09!130;UBERON:0000925!1.28e-09!130;UBERON:0006595!1.28e-09!130;UBERON:0004921!5.47e-08!126;UBERON:0004185!5.47e-08!126;UBERON:0001962!4.11e-07!2;UBERON:0001961!4.11e-07!2;UBERON:0001744!4.11e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.88e-36,31;UBERON:0001242,2.00e-28,13;UBERON:0001262,2.00e-28,13;UBERON:0004786,2.00e-28,13;UBERON:0000344,1.51e-24,15;UBERON:0005409,3.14e-23,47;UBERON:0003350,2.09e-16,9;UBERON:0004808,2.09e-16,9;UBERON:0001277,2.09e-16,9;UBERON:0004923,4.58e-15,24;UBERON:0002108,7.73e-14,4;UBERON:0000485,2.03e-13,11;UBERON:0000331,8.49e-09,3;UBERON:0002116,8.49e-09,3;UBERON:0001204,8.49e-09,3;UBERON:0001168,8.49e-09,3;UBERON:0004921,1.30e-08,114;UBERON:0001007,1.96e-08,116;UBERON:0001555,1.96e-08,116;UBERON:0007026,1.96e-08,116;UBERON:0004119,2.92e-08,118;UBERON:0000925,2.92e-08,118;UBERON:0006595,2.92e-08,118 | |||
|phase1_expression=0,0.697950815278722,2.27499619694768,8.46899791659124,14.5259761684441,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.22940928106717,1.14846392823004,0,0,2.09025761402011,3.78045194639896,0,0,0,0,1.1554064790051,0.332469290716985,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.61711931072457,0.264450566663544,0,0,0,0,0,0,1.89811624617805,0,0.251335208800269,0,0,4.49409704327111,4.75503709724327,3.18626037206988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62332752966866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.697950815278722,2.27499619694768,8.46899791659124,14.5259761684441,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.22940928106717,1.14846392823004,0,0,2.09025761402011,3.78045194639896,0,0,0,0,1.1554064790051,0.332469290716985,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.61711931072457,0.264450566663544,0,0,0,0,0,0,1.89811624617805,0,0.251335208800269,0,0,4.49409704327111,4.75503709724327,3.18626037206988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62332752966866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:41678932..41678936,+ | |||
}} | }} |
Latest revision as of 09:16, 4 August 2015
Short description: | p@chr10:41678932..41678936, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:41678932..41678936, + |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.09e-16 | 9 |
epithelial cell of alimentary canal | 2.09e-16 | 9 |
endo-epithelial cell | 7.99e-10 | 15 |
brush border epithelial cell | 8.61e-10 | 6 |
gut absorptive cell | 8.61e-10 | 6 |
enterocyte | 8.61e-10 | 6 |
columnar/cuboidal epithelial cell | 1.83e-08 | 7 |
intestinal crypt stem cell | 2.06e-08 | 3 |
epithelial cell | 4.21e-08 | 25 |
endodermal cell | 2.43e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.88e-36 | 31 |
intestinal mucosa | 2.00e-28 | 13 |
wall of intestine | 2.00e-28 | 13 |
gastrointestinal system mucosa | 2.00e-28 | 13 |
mucosa | 1.51e-24 | 15 |
gastrointestinal system | 3.14e-23 | 47 |
epithelium of mucosa | 2.09e-16 | 9 |
gastrointestinal system epithelium | 2.09e-16 | 9 |
intestinal epithelium | 2.09e-16 | 9 |
organ component layer | 4.58e-15 | 24 |
small intestine | 7.73e-14 | 4 |
simple columnar epithelium | 2.03e-13 | 11 |
ileal mucosa | 8.49e-09 | 3 |
ileum | 8.49e-09 | 3 |
mucosa of small intestine | 8.49e-09 | 3 |
wall of small intestine | 8.49e-09 | 3 |
subdivision of digestive tract | 1.30e-08 | 114 |
digestive system | 1.96e-08 | 116 |
digestive tract | 1.96e-08 | 116 |
primitive gut | 1.96e-08 | 116 |
endoderm-derived structure | 2.92e-08 | 118 |
endoderm | 2.92e-08 | 118 |
presumptive endoderm | 2.92e-08 | 118 |