FFCP PHASE1:Mm9::chr11:51076447..51076456,+: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr11:51076447..51076456,+ to FFCP PHASE1:Mm9::chr11:51076447..51076456,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=12750 | |EntrezGene=12750 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2571 | |||
|TSSclassifier=NA | |||
|UniProt=O35493 | |UniProt=O35493 | ||
|association_with_transcript=-159bp_to_ENSMUST00000093132_5end | |||
|cluster_id=chr11:51076447..51076456,+ | |||
|description=CAGE_peak_3_at_Clk4_5end | |||
|id=chr11:51076447..51076456,+ | |||
|ontology_enrichment_celltype=CL:0002563!9.31e-10!9;CL:0002251!9.31e-10!9;CL:0000063!1.37e-08!66;CL:0000988!7.00e-08!32;CL:0002032!7.00e-08!32;CL:0000037!7.00e-08!32;CL:0000566!7.00e-08!32;CL:0000837!7.00e-08!32;CL:0000239!1.79e-07!6;CL:0000677!1.79e-07!6;CL:0000212!1.79e-07!6;CL:0000584!1.79e-07!6;CL:0000791!2.81e-07!9;CL:0000789!2.81e-07!9;CL:0002420!2.81e-07!9;CL:0002419!2.81e-07!9;CL:0000790!2.81e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.11e-24,9;CL:0002251,2.11e-24,9;CL:0000239,6.37e-21,6;CL:0000677,6.37e-21,6;CL:0000584,6.37e-21,6;CL:0000075,7.37e-18,7;CL:0002076,3.59e-14,15;CL:0000223,3.97e-13,20;CL:0000066,1.47e-12,25;CL:0000838,2.13e-10,12;CL:0000791,4.64e-10,9;CL:0000789,4.64e-10,9;CL:0002420,4.64e-10,9;CL:0002419,4.64e-10,9;CL:0000790,4.64e-10,9;CL:0000542,1.50e-09,13;CL:0000051,1.50e-09,13;CL:0000084,3.56e-08,11;CL:0000827,3.56e-08,11;CL:0000624,1.66e-07,8;CL:0000988,1.73e-07,32;CL:0002032,1.73e-07,32;CL:0000037,1.73e-07,32;CL:0000837,1.73e-07,32;CL:0000738,3.71e-07,17;CL:0002087,3.71e-07,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!9.31e-10!9;UBERON:0004808!9.31e-10!9;UBERON:0001277!9.31e-10!9;UBERON:0000490!5.22e-09!66;UBERON:0001242!1.81e-08!13;UBERON:0000060!1.81e-08!13;UBERON:0001262!1.81e-08!13;UBERON:0004786!1.81e-08!13;UBERON:0003929!2.20e-08!55;UBERON:0000344!3.79e-08!15;UBERON:0000485!1.93e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,2.11e-24,9;UBERON:0004808,2.11e-24,9;UBERON:0001277,2.11e-24,9;UBERON:0000485,9.38e-20,11;UBERON:0001242,1.56e-16,13;UBERON:0001262,1.56e-16,13;UBERON:0004786,1.56e-16,13;UBERON:0000344,3.59e-14,15;UBERON:0004923,2.09e-08,24;UBERON:0000490,6.67e-08,66;UBERON:0003929,3.56e-07,55 | |||
|phase1_expression=0,2.79180326111489,2.27499619694768,3.0246421130683,11.0197060588196,1.51091344720701,1.86890112476421,0.774739940649458,5.34997144176334,7.49006484230379,0,0.159544317990673,0.856003649656029,1.22388563386596,0.333109761815663,0.202475267389826,0,0.157731082679119,0.137114433605739,0.42438965179803,0.0850432901510698,0,0,0,0.22940928106717,0.57423196411502,1.7230479846363,0.646413698057667,0.190023419456374,0,0,0.635030673459631,0,0,2.59966457776147,0.166234645358492,4.08338712524738,2.51118978442145,0.7813353445238,1.57057123192139,5.29408339227913,0.683045484958446,1.45653105909346,0.125896817975577,0.202753862439029,0,0,0,0,0,0,0,1.8456086666351,6.5282592781021,3.6970317905671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47837386442013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0.433798070759735,0,0,0,0,0,0,0,0,1.07833612055328,0.599902730993408,1.77898317902291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0.772043721344145,1.98914449576915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.264450566663544,0,0,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0.38992817423824,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0.140271639780637,0.126473074248515,0,0,0.123397163921801,0.296452627087149,0.166845105716094,0.196558995113203,0.224862112384854,0.405720242777006,0.482354319504834,0,0.287696137450811,0,0,0,0.372140947668503,0.312037673114561,0,0,0,0,0,0,0,0,0.167506257441816,0,0.390267295715598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,1.13163047853539,0,0,0,0.363533729477506,0,0,1.05418608574999,0,0,0,0,0,0,0.178368817602071,0,0,0,0.63549621259146,0,0,0.161464426695906,0.120625849856312,0.119372344003136,0.328281799490123,0,0,0.341741761595705,0,0,0,0,0.457556346413045,0.849892149969277,1.25956307091292,0.967399816630967,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0.209718688851422,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0,0.228620419965,0.100826185136841,0.194915761479505,0,0.350630706544707,0,0.221985953374065,0.0897138566094757,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0.192075457214608,0.0574354689556133,0,0,0,0.824171801606613,0,0,0,0,0,0,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0,0,0.309873682371932,0,0,0,0,0,0,0 | |phase1_expression=0,2.79180326111489,2.27499619694768,3.0246421130683,11.0197060588196,1.51091344720701,1.86890112476421,0.774739940649458,5.34997144176334,7.49006484230379,0,0.159544317990673,0.856003649656029,1.22388563386596,0.333109761815663,0.202475267389826,0,0.157731082679119,0.137114433605739,0.42438965179803,0.0850432901510698,0,0,0,0.22940928106717,0.57423196411502,1.7230479846363,0.646413698057667,0.190023419456374,0,0,0.635030673459631,0,0,2.59966457776147,0.166234645358492,4.08338712524738,2.51118978442145,0.7813353445238,1.57057123192139,5.29408339227913,0.683045484958446,1.45653105909346,0.125896817975577,0.202753862439029,0,0,0,0,0,0,0,1.8456086666351,6.5282592781021,3.6970317905671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47837386442013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0.433798070759735,0,0,0,0,0,0,0,0,1.07833612055328,0.599902730993408,1.77898317902291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0.772043721344145,1.98914449576915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.264450566663544,0,0,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0.38992817423824,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0.140271639780637,0.126473074248515,0,0,0.123397163921801,0.296452627087149,0.166845105716094,0.196558995113203,0.224862112384854,0.405720242777006,0.482354319504834,0,0.287696137450811,0,0,0,0.372140947668503,0.312037673114561,0,0,0,0,0,0,0,0,0.167506257441816,0,0.390267295715598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,1.13163047853539,0,0,0,0.363533729477506,0,0,1.05418608574999,0,0,0,0,0,0,0.178368817602071,0,0,0,0.63549621259146,0,0,0.161464426695906,0.120625849856312,0.119372344003136,0.328281799490123,0,0,0.341741761595705,0,0,0,0,0.457556346413045,0.849892149969277,1.25956307091292,0.967399816630967,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0.209718688851422,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0,0.228620419965,0.100826185136841,0.194915761479505,0,0.350630706544707,0,0.221985953374065,0.0897138566094757,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0.192075457214608,0.0574354689556133,0,0,0,0.824171801606613,0,0,0,0,0,0,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0,0,0.309873682371932,0,0,0,0,0,0,0 | ||
|short_description=p3@Clk4 | |||
}} | }} |
Latest revision as of 15:22, 1 October 2015
Short description: | p3@Clk4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Clk4_5end |
Coexpression cluster: | MCL_coexpression_mm9:2571 |
Association with transcript: | -159bp_to_ENSMUST00000093132_5end |
EntrezGene: | Clk4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.11e-24 | 9 |
epithelial cell of alimentary canal | 2.11e-24 | 9 |
brush border epithelial cell | 6.37e-21 | 6 |
gut absorptive cell | 6.37e-21 | 6 |
enterocyte | 6.37e-21 | 6 |
columnar/cuboidal epithelial cell | 7.37e-18 | 7 |
endo-epithelial cell | 3.59e-14 | 15 |
endodermal cell | 3.97e-13 | 20 |
epithelial cell | 1.47e-12 | 25 |
lymphoid lineage restricted progenitor cell | 2.13e-10 | 12 |
mature alpha-beta T cell | 4.64e-10 | 9 |
alpha-beta T cell | 4.64e-10 | 9 |
immature T cell | 4.64e-10 | 9 |
mature T cell | 4.64e-10 | 9 |
immature alpha-beta T cell | 4.64e-10 | 9 |
lymphocyte | 1.50e-09 | 13 |
common lymphoid progenitor | 1.50e-09 | 13 |
T cell | 3.56e-08 | 11 |
pro-T cell | 3.56e-08 | 11 |
CD4-positive, alpha-beta T cell | 1.66e-07 | 8 |
hematopoietic cell | 1.73e-07 | 32 |
hematopoietic oligopotent progenitor cell | 1.73e-07 | 32 |
hematopoietic stem cell | 1.73e-07 | 32 |
hematopoietic multipotent progenitor cell | 1.73e-07 | 32 |
leukocyte | 3.71e-07 | 17 |
nongranular leukocyte | 3.71e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 2.11e-24 | 9 |
gastrointestinal system epithelium | 2.11e-24 | 9 |
intestinal epithelium | 2.11e-24 | 9 |
simple columnar epithelium | 9.38e-20 | 11 |
intestinal mucosa | 1.56e-16 | 13 |
wall of intestine | 1.56e-16 | 13 |
gastrointestinal system mucosa | 1.56e-16 | 13 |
mucosa | 3.59e-14 | 15 |
organ component layer | 2.09e-08 | 24 |
unilaminar epithelium | 6.67e-08 | 66 |
gut epithelium | 3.56e-07 | 55 |