FFCP PHASE1:Mm9::chr15:100467515..100467538,-: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr15:100467515..100467538,- to FFCP PHASE1:Mm9::chr15:100467515..100467538,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=207818 | |EntrezGene=207818 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2127 | |||
|TSSclassifier=NA | |||
|UniProt=Q99KC7 | |UniProt=Q99KC7 | ||
|association_with_transcript=-219bp_to_ENSMUST00000172334,NM_001033872,uc007xrv.1_5end | |||
|cluster_id=chr15:100467515..100467538,- | |||
|description=CAGE_peak_6_at_Smagp_5end | |||
|id=chr15:100467515..100467538,- | |||
|ontology_enrichment_celltype=CL:0000066!2.81e-08!25;CL:0000223!3.19e-07!20;CL:0002563!3.20e-07!9;CL:0002251!3.20e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.42e-11,9;CL:0002251,1.42e-11,9;CL:0000066,2.24e-10,25;CL:0002076,7.17e-10,15;CL:0000223,1.97e-09,20;CL:0000239,3.42e-08,6;CL:0000677,3.42e-08,6;CL:0000584,3.42e-08,6;CL:0000075,7.35e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.41e-13!43;UBERON:0005409!5.64e-12!59;UBERON:0000344!1.49e-10!15;UBERON:0004119!1.66e-10!130;UBERON:0000925!1.66e-10!130;UBERON:0006595!1.66e-10!130;UBERON:0001007!2.17e-10!128;UBERON:0001555!2.17e-10!128;UBERON:0007026!2.17e-10!128;UBERON:0001008!2.31e-10!17;UBERON:0006554!4.13e-10!16;UBERON:0004921!1.88e-09!126;UBERON:0004185!1.88e-09!126;UBERON:0002113!3.06e-09!14;UBERON:0003918!3.06e-09!14;UBERON:0005095!3.06e-09!14;UBERON:0007687!3.06e-09!14;UBERON:0001242!3.71e-09!13;UBERON:0000060!3.71e-09!13;UBERON:0001262!3.71e-09!13;UBERON:0004786!3.71e-09!13;UBERON:0003350!3.20e-07!9;UBERON:0004808!3.20e-07!9;UBERON:0001277!3.20e-07!9;UBERON:0005177!4.51e-07!85;UBERON:0009569!9.98e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.16e-16,31;UBERON:0000344,8.85e-16,15;UBERON:0005409,1.94e-15,47;UBERON:0001242,2.42e-13,13;UBERON:0001262,2.42e-13,13;UBERON:0004786,2.42e-13,13;UBERON:0006554,1.45e-12,18;UBERON:0004119,6.60e-12,118;UBERON:0000925,6.60e-12,118;UBERON:0006595,6.60e-12,118;UBERON:0001008,1.11e-11,19;UBERON:0003350,1.42e-11,9;UBERON:0004808,1.42e-11,9;UBERON:0001277,1.42e-11,9;UBERON:0001007,1.68e-11,116;UBERON:0001555,1.68e-11,116;UBERON:0007026,1.68e-11,116;UBERON:0002113,4.60e-11,14;UBERON:0003918,4.60e-11,14;UBERON:0011143,4.60e-11,14;UBERON:0005095,4.60e-11,14;UBERON:0007687,4.60e-11,14;UBERON:0004923,6.40e-11,24;UBERON:0004921,3.81e-10,114;UBERON:0000485,4.84e-09,11;UBERON:0000489,2.09e-07,21 | |||
|phase1_expression=0.160148847104794,3.14077866875425,3.63999391511629,3.0246421130683,4.00716583957078,2.35030980676646,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,2.97651515528744,0.0992909512008853,0,3.35984087866154,3.21172993494038,1.14846392823004,1.29228598847722,2.37018355954478,2.85035129184561,2.26827116783938,2.66076612786366,0,0,0,1.73310971850765,3.65716219788683,4.49172583777212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503347818173209,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0.869593466105033,2.58127163094416,0.679971333707751,3.77792234146472,0.649776417447669,1.34408066129201,1.26399978118577,0,0,0,0.14084341977668,0,0,0,1.08245520505607,1.01343946190039,1.01104889002957,3.19714863213368,0.258937883647172,1.03909497345377,0,0,0.691846491768175,0.150722640552623,0.23517741427141,0.753999547978053,1.23597483867187,0.289198713839823,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0.916554274652847,0.248813941220186,2.52722758433675,2.10441855886474,0,0.229902104433473,0,0.150704817835715,0.0680364991513279,0,0.187403449119458,0.258703370739016,0,0,0.175951124163949,0.219195732427575,0.556094498451196,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0.134206418760372,0,0,0.660837565967596,1.85115396664481,0,0,0.38660238396628,1.00841762311671,0.22237804384487,0.760902504450237,1.42358718463353,1.31759163779209,2.26201687920243,3.18330355265841,1.9496408711912,4.49409704327111,2.16138049874694,1.99141273254367,0.569003702859245,1.48523066392647,2.25415471346161,3.86937522906097,7.5641469995374,4.27828501330943,7.08249215791682,11.513591542409,11.7749045881031,8.76119863844784,0.592905254174298,0.166845105716094,0,0,0,0,1.01850340712568,0,0.324270453550071,0.274561413188081,0,1.48856379067401,1.24815069245824,2.77836765741823,1.61457672169721,1.92977408545347,0.923765950833023,0,0,0,0,0.335012514883631,0,0.195133647857799,0,0.221464689648775,0.318909537314974,1.14704320301017,0.690739927463582,0.289298117163023,0,0,0.491764273019036,1.10374698521893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.712262414669021,0.325773918707152,0.659880491890142,1.32745138339963,0.485561272309963,0.302323556964751,0.754420319023592,0.295301892880773,0,0.258428293168221,0.363533729477506,0.712994756769443,0.948110273807448,0,2.06271086496374,0,0,0,0,0,0,0,0,0,2.1183207086382,1.7642271844397,1.6488625294148,0.645857706783622,0.542816324353403,1.43246812803764,1.80554989719567,1.7488850197791,0,0,0,0,0,0,0,0.169978429993855,0,0,4.77335309007557,0,0,0.324016022465404,1.04544148007234,1.09181281873089,1.07891477107857,0.991841468704031,2.87931536182433,2.59229946583586,3.72803587852155,0,0.149516546043979,0,0,0,0.168956125490778,0.117357238645754,0.2604087696879,0.209718688851422,0.241584120826006,0.288030006257865,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0.680191150845634,0.887943813496259,0.448569283047378,0.167884616364078,1.15913756419314,1.50145980360946,2.93042598827624,0.857473516316263,3.00943262421218,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.367687016900028,0.222246727801615,0.618105171716683,0.320919209591815,0.505394423527595,0,0,0.468207537349412,0.384150914429216,0.34461281373368,0,0.115884325944855,0.192909220463705,0.412085900803307,0,0.342869252385415,0.70990322463735,0.238436189947321,0.145346416632329,0.282328141245992,0.338458431566706,0,0,0,0,0.118635018124174,0.492522411877817,0.409231043169689,0.464810523557898,0.578719832943424,0.249810577937946,0.233931608445408,0.644613162144895,0,0,0 | |phase1_expression=0.160148847104794,3.14077866875425,3.63999391511629,3.0246421130683,4.00716583957078,2.35030980676646,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,2.97651515528744,0.0992909512008853,0,3.35984087866154,3.21172993494038,1.14846392823004,1.29228598847722,2.37018355954478,2.85035129184561,2.26827116783938,2.66076612786366,0,0,0,1.73310971850765,3.65716219788683,4.49172583777212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503347818173209,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0.869593466105033,2.58127163094416,0.679971333707751,3.77792234146472,0.649776417447669,1.34408066129201,1.26399978118577,0,0,0,0.14084341977668,0,0,0,1.08245520505607,1.01343946190039,1.01104889002957,3.19714863213368,0.258937883647172,1.03909497345377,0,0,0.691846491768175,0.150722640552623,0.23517741427141,0.753999547978053,1.23597483867187,0.289198713839823,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0.916554274652847,0.248813941220186,2.52722758433675,2.10441855886474,0,0.229902104433473,0,0.150704817835715,0.0680364991513279,0,0.187403449119458,0.258703370739016,0,0,0.175951124163949,0.219195732427575,0.556094498451196,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0.134206418760372,0,0,0.660837565967596,1.85115396664481,0,0,0.38660238396628,1.00841762311671,0.22237804384487,0.760902504450237,1.42358718463353,1.31759163779209,2.26201687920243,3.18330355265841,1.9496408711912,4.49409704327111,2.16138049874694,1.99141273254367,0.569003702859245,1.48523066392647,2.25415471346161,3.86937522906097,7.5641469995374,4.27828501330943,7.08249215791682,11.513591542409,11.7749045881031,8.76119863844784,0.592905254174298,0.166845105716094,0,0,0,0,1.01850340712568,0,0.324270453550071,0.274561413188081,0,1.48856379067401,1.24815069245824,2.77836765741823,1.61457672169721,1.92977408545347,0.923765950833023,0,0,0,0,0.335012514883631,0,0.195133647857799,0,0.221464689648775,0.318909537314974,1.14704320301017,0.690739927463582,0.289298117163023,0,0,0.491764273019036,1.10374698521893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.712262414669021,0.325773918707152,0.659880491890142,1.32745138339963,0.485561272309963,0.302323556964751,0.754420319023592,0.295301892880773,0,0.258428293168221,0.363533729477506,0.712994756769443,0.948110273807448,0,2.06271086496374,0,0,0,0,0,0,0,0,0,2.1183207086382,1.7642271844397,1.6488625294148,0.645857706783622,0.542816324353403,1.43246812803764,1.80554989719567,1.7488850197791,0,0,0,0,0,0,0,0.169978429993855,0,0,4.77335309007557,0,0,0.324016022465404,1.04544148007234,1.09181281873089,1.07891477107857,0.991841468704031,2.87931536182433,2.59229946583586,3.72803587852155,0,0.149516546043979,0,0,0,0.168956125490778,0.117357238645754,0.2604087696879,0.209718688851422,0.241584120826006,0.288030006257865,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0.680191150845634,0.887943813496259,0.448569283047378,0.167884616364078,1.15913756419314,1.50145980360946,2.93042598827624,0.857473516316263,3.00943262421218,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.367687016900028,0.222246727801615,0.618105171716683,0.320919209591815,0.505394423527595,0,0,0.468207537349412,0.384150914429216,0.34461281373368,0,0.115884325944855,0.192909220463705,0.412085900803307,0,0.342869252385415,0.70990322463735,0.238436189947321,0.145346416632329,0.282328141245992,0.338458431566706,0,0,0,0,0.118635018124174,0.492522411877817,0.409231043169689,0.464810523557898,0.578719832943424,0.249810577937946,0.233931608445408,0.644613162144895,0,0,0 | ||
|short_description=p6@Smagp | |||
}} | }} |
Latest revision as of 12:20, 26 September 2015
Short description: | p6@Smagp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Smagp_5end |
Coexpression cluster: | MCL_coexpression_mm9:2127 |
Association with transcript: | -219bp_to_ENSMUST00000172334, NM_001033872, uc007xrv.1_5end |
EntrezGene: | Smagp |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.42e-11 | 9 |
epithelial cell of alimentary canal | 1.42e-11 | 9 |
epithelial cell | 2.24e-10 | 25 |
endo-epithelial cell | 7.17e-10 | 15 |
endodermal cell | 1.97e-09 | 20 |
brush border epithelial cell | 3.42e-08 | 6 |
gut absorptive cell | 3.42e-08 | 6 |
enterocyte | 3.42e-08 | 6 |
columnar/cuboidal epithelial cell | 7.35e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.16e-16 | 31 |
mucosa | 8.85e-16 | 15 |
gastrointestinal system | 1.94e-15 | 47 |
intestinal mucosa | 2.42e-13 | 13 |
wall of intestine | 2.42e-13 | 13 |
gastrointestinal system mucosa | 2.42e-13 | 13 |
urinary system structure | 1.45e-12 | 18 |
endoderm-derived structure | 6.60e-12 | 118 |
endoderm | 6.60e-12 | 118 |
presumptive endoderm | 6.60e-12 | 118 |
renal system | 1.11e-11 | 19 |
epithelium of mucosa | 1.42e-11 | 9 |
gastrointestinal system epithelium | 1.42e-11 | 9 |
intestinal epithelium | 1.42e-11 | 9 |
digestive system | 1.68e-11 | 116 |
digestive tract | 1.68e-11 | 116 |
primitive gut | 1.68e-11 | 116 |
kidney | 4.60e-11 | 14 |
kidney mesenchyme | 4.60e-11 | 14 |
upper urinary tract | 4.60e-11 | 14 |
kidney rudiment | 4.60e-11 | 14 |
kidney field | 4.60e-11 | 14 |
organ component layer | 6.40e-11 | 24 |
subdivision of digestive tract | 3.81e-10 | 114 |
simple columnar epithelium | 4.84e-09 | 11 |
cavitated compound organ | 2.09e-07 | 21 |