FFCP PHASE1:Mm9::chr18:60908262..60908348,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr18:60908262..60908348,- to FFCP PHASE1:Mm9::chr18:60908262..60908348,-: NSchange) |
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(6 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=15531 | |EntrezGene=15531 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q3UHN9 | |UniProt=Q3UHN9 | ||
|association_with_transcript=0bp_to_ENSMUST00000066785,uc008fau.1_5end | |||
|cluster_id=chr18:60908262..60908348,- | |||
|description=CAGE_peak_1_at_Ndst1_5end | |||
|id=chr18:60908262..60908348,- | |||
|ontology_enrichment_celltype=CL:0000221!5.62e-15!44;CL:0000133!5.62e-15!44;CL:0002319!2.21e-14!43;CL:0000055!3.11e-13!50;CL:0002321!2.11e-10!70;CL:0000220!2.11e-10!70;CL:0000540!7.78e-09!33;CL:0000047!7.78e-09!33;CL:0000031!7.78e-09!33;CL:0000404!7.78e-09!33;CL:0000393!7.44e-08!39;CL:0000211!7.44e-08!39;CL:0000333!2.92e-07!10;CL:0000095!2.92e-07!10;CL:0000243!2.92e-07!10;CL:0000123!2.92e-07!10;CL:0000125!2.92e-07!10;CL:0000030!2.92e-07!10;CL:0000339!2.92e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,5.62e-15,44;CL:0000133,5.62e-15,44;CL:0002319,2.21e-14,43;CL:0002321,2.11e-10,70;CL:0000540,7.77e-09,33;CL:0000047,7.77e-09,33;CL:0000031,7.77e-09,33;CL:0000404,7.77e-09,33;CL:0000393,7.44e-08,39;CL:0000211,7.44e-08,39;CL:0000333,2.92e-07,10;CL:0000095,2.92e-07,10;CL:0000243,2.92e-07,10;CL:0000123,2.92e-07,10;CL:0000125,2.92e-07,10;CL:0000030,2.92e-07,10;CL:0000339,2.92e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.38e-11!102;UBERON:0000924!4.38e-11!102;UBERON:0006601!4.38e-11!102;UBERON:0000073!8.98e-10!75;UBERON:0001016!8.98e-10!75;UBERON:0001017!7.18e-09!73;UBERON:0005743!7.18e-09!73;UBERON:0000468!7.30e-09!333;UBERON:0000025!1.65e-08!114;UBERON:0004111!7.50e-08!122;UBERON:0000010!5.56e-07!11;UBERON:0000922!6.92e-07!328 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.98e-10,75;UBERON:0004121,9.43e-10,95;UBERON:0000924,9.43e-10,95;UBERON:0006601,9.43e-10,95;UBERON:0001017,7.18e-09,73;UBERON:0000025,1.65e-08,114;UBERON:0000922,2.37e-08,320;UBERON:0004111,7.50e-08,122;UBERON:0010314,1.04e-07,92;UBERON:0000010,5.56e-07,11 | |||
|phase1_expression=19.6983081938897,7.67745896806594,9.09998478779072,20.5675663688644,23.5420993074783,6.5472916045637,6.07392865548367,4.13194635013044,2.53419699873,2.34064526321993,5.47897498321616,7.73789942254763,2.9104124088305,3.05971408466491,1.66554880907831,2.83465374345756,1.39912375625629,3.78554598429885,4.2505474417779,3.81950686618227,11.7359740408476,6.65249373045932,4.4403964153619,3.51983330145495,3.67054849707472,7.46501553349526,3.87685796543167,3.878482188346,3.6104449696711,7.05684363327806,2.88249663851896,3.17515336729816,4.30545351309199,0,2.3108129580102,4.3221007793208,3.67504841272264,0.837063261473815,1.5626706890476,0,0,0,0,8.56098362233926,11.0500855029271,11.5634453861859,18.7773922643529,48.6196098728396,38.2253957957981,42.3857179981938,24.7775966276892,43.1257693094915,2.18117387875057,5.07753499407941,3.6970317905671,19.294457702696,18.0516067161417,14.4388185837684,16.589949790487,20.1016572123373,16.4796164911607,16.2645375393183,12.450127145556,26.0970918011606,17.7995945262055,22.0248835633291,38.6484142568742,41.8797952800494,21.2563705232379,18.2258016747782,19.7705463670299,23.4233807211119,25.3998822094356,19.5985278743926,19.9358579717932,18.3843757322004,6.60695285996332,16.5993539510744,15.9750794586493,20.44237459818,22.9633985442048,20.3156214517136,14.2383329490704,12.380777420697,12.9878510610289,26.5165726926301,23.9184423742493,18.6399445825301,29.0788582399427,28.8683359607921,27.2472619379577,18.0689014166091,25.1589393471868,35.0807074564581,22.0923981932207,24.1934519032561,12.3591089715942,14.657007741713,9.35229616570328,9.54016851177919,28.8729010542195,10.2661181931454,22.9324715735981,28.4426681261332,3.46385665617943,4.56047757855178,5.56076889516262,16.2141109201065,2.84831672011889,24.4929529456961,17.3485326766136,10.6562917409249,14.9900073216438,18.38816214742,22.3418543557839,29.2803157798144,12.3597483867187,10.9895511259133,7.07688441559899,15.6913844448987,10.6003928860989,10.6672555689749,5.59175283654366,10.5401086924157,11.51956887474,6.13096932500619,5.87094110079009,1.79970819298022,5.59108999121485,10.3355541189328,11.8950156732843,24.6282530141214,10.4294592115366,13.5529192385075,13.2984348518118,14.4394724130304,23.9322505048243,11.3210343255185,6.06534620240819,10.7325346502102,13.7927669540466,11.7250073261071,13.6847218652065,14.4676625122286,19.6625482547337,17.4234659587396,21.082888025939,11.9003550539947,21.5567992932842,15.5066985737612,14.4279921814438,12.9325482132269,12.7901734643775,15.6713474934975,12.3469281844766,15.1266042782055,2.80885274925294,3.3455227924913,4.26245249093389,14.4988040774851,14.3060896588469,13.3245925481151,15.3884078130387,12.5929108318338,11.2614992407786,15.3472403535269,17.4377710909752,17.1645053279739,20.0763016894446,18.3867559768587,19.0511702432761,16.6667985664879,14.9294078397914,21.0704077453784,12.6173969138476,22.5361101110633,16.1905203662061,8.72686869989696,14.7168892869311,15.0953836709285,12.7578786708872,12.1010114774006,12.8979265430025,12.7451169495415,9.49058123089023,11.6936257854048,12.8180956488137,13.131127154716,12.4777015756237,8.08937467788799,11.0230405436094,10.3553462092271,10.6214024533726,13.1385789501188,16.9061603509621,16.0884548997798,12.9948166402309,23.776042942818,27.3181840376791,27.455487524206,24.3348028154131,26.6537874071089,24.9020206753205,5.33904338291501,7.86235980452812,6.07127703439105,6.28866376304359,6.51178331331525,7.12952384987975,8.34318798607351,12.9708181420028,12.3552635934637,30.1913233707445,16.0020607497456,23.402825483592,22.7320990152401,20.8100999685418,33.7710464954357,15.7040211641614,16.1067700004912,18.0891123850649,13.7493519477902,19.2446003596572,18.7607008334834,15.9489239393629,24.7819732779405,22.0689201748667,23.6967217924189,34.1233204927022,18.5165545628784,21.5856227332369,28.0619173648132,18.0949540727127,3.26343410291226,8.85175691434265,15.7283945393698,9.63303539926752,13.244920584919,10.9836413402373,23.7322671572111,19.2460013843917,23.0358859135017,23.2657269551423,33.9335693092624,35.2021905050183,47.273780641735,27.1223170122179,27.179794785752,24.5078422326845,14.1381379225595,16.7489300545757,19.5872164033981,24.59593086239,20.4562952485944,2.65490276679926,13.352934988524,8.16273603804828,8.29862350925952,13.2885851796348,12.912276213645,15.7641258832615,15.6319503675327,12.1209108650805,7.58488219045958,3.16255825724996,4.12542172992747,5.7874732978144,15.8453762747553,19.9212373025442,14.7892554171799,19.1527452333655,18.9070946658195,17.7712942250291,28.3152402676577,6.10146440965647,9.53244318887191,6.61585194164886,9.56340267060584,22.282090884035,18.0335645535186,18.2639686324799,11.8181447816444,9.61886760878507,14.2777482548092,4.61351378154202,18.3684312487268,9.07453184111587,4.1441060541032,4.23752105935178,6.63456702298916,8.83887835968048,7.97723278244851,9.81219814011409,2.86401185404534,19.1383276116587,20.3319467126849,12.2046035128635,10.0362382086945,12.0099410060398,12.8121129065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| |phase1_expression=19.6983081938897,7.67745896806594,9.09998478779072,20.5675663688644,23.5420993074783,6.5472916045637,6.07392865548367,4.13194635013044,2.53419699873,2.34064526321993,5.47897498321616,7.73789942254763,2.9104124088305,3.05971408466491,1.66554880907831,2.83465374345756,1.39912375625629,3.78554598429885,4.2505474417779,3.81950686618227,11.7359740408476,6.65249373045932,4.4403964153619,3.51983330145495,3.67054849707472,7.46501553349526,3.87685796543167,3.878482188346,3.6104449696711,7.05684363327806,2.88249663851896,3.17515336729816,4.30545351309199,0,2.3108129580102,4.3221007793208,3.67504841272264,0.837063261473815,1.5626706890476,0,0,0,0,8.56098362233926,11.0500855029271,11.5634453861859,18.7773922643529,48.6196098728396,38.2253957957981,42.3857179981938,24.7775966276892,43.1257693094915,2.18117387875057,5.07753499407941,3.6970317905671,19.294457702696,18.0516067161417,14.4388185837684,16.589949790487,20.1016572123373,16.4796164911607,16.2645375393183,12.450127145556,26.0970918011606,17.7995945262055,22.0248835633291,38.6484142568742,41.8797952800494,21.2563705232379,18.2258016747782,19.7705463670299,23.4233807211119,25.3998822094356,19.5985278743926,19.9358579717932,18.3843757322004,6.60695285996332,16.5993539510744,15.9750794586493,20.44237459818,22.9633985442048,20.3156214517136,14.2383329490704,12.380777420697,12.9878510610289,26.5165726926301,23.9184423742493,18.6399445825301,29.0788582399427,28.8683359607921,27.2472619379577,18.0689014166091,25.1589393471868,35.0807074564581,22.0923981932207,24.1934519032561,12.3591089715942,14.657007741713,9.35229616570328,9.54016851177919,28.8729010542195,10.2661181931454,22.9324715735981,28.4426681261332,3.46385665617943,4.56047757855178,5.56076889516262,16.2141109201065,2.84831672011889,24.4929529456961,17.3485326766136,10.6562917409249,14.9900073216438,18.38816214742,22.3418543557839,29.2803157798144,12.3597483867187,10.9895511259133,7.07688441559899,15.6913844448987,10.6003928860989,10.6672555689749,5.59175283654366,10.5401086924157,11.51956887474,6.13096932500619,5.87094110079009,1.79970819298022,5.59108999121485,10.3355541189328,11.8950156732843,24.6282530141214,10.4294592115366,13.5529192385075,13.2984348518118,14.4394724130304,23.9322505048243,11.3210343255185,6.06534620240819,10.7325346502102,13.7927669540466,11.7250073261071,13.6847218652065,14.4676625122286,19.6625482547337,17.4234659587396,21.082888025939,11.9003550539947,21.5567992932842,15.5066985737612,14.4279921814438,12.9325482132269,12.7901734643775,15.6713474934975,12.3469281844766,15.1266042782055,2.80885274925294,3.3455227924913,4.26245249093389,14.4988040774851,14.3060896588469,13.3245925481151,15.3884078130387,12.5929108318338,11.2614992407786,15.3472403535269,17.4377710909752,17.1645053279739,20.0763016894446,18.3867559768587,19.0511702432761,16.6667985664879,14.9294078397914,21.0704077453784,12.6173969138476,22.5361101110633,16.1905203662061,8.72686869989696,14.7168892869311,15.0953836709285,12.7578786708872,12.1010114774006,12.8979265430025,12.7451169495415,9.49058123089023,11.6936257854048,12.8180956488137,13.131127154716,12.4777015756237,8.08937467788799,11.0230405436094,10.3553462092271,10.6214024533726,13.1385789501188,16.9061603509621,16.0884548997798,12.9948166402309,23.776042942818,27.3181840376791,27.455487524206,24.3348028154131,26.6537874071089,24.9020206753205,5.33904338291501,7.86235980452812,6.07127703439105,6.28866376304359,6.51178331331525,7.12952384987975,8.34318798607351,12.9708181420028,12.3552635934637,30.1913233707445,16.0020607497456,23.402825483592,22.7320990152401,20.8100999685418,33.7710464954357,15.7040211641614,16.1067700004912,18.0891123850649,13.7493519477902,19.2446003596572,18.7607008334834,15.9489239393629,24.7819732779405,22.0689201748667,23.6967217924189,34.1233204927022,18.5165545628784,21.5856227332369,28.0619173648132,18.0949540727127,3.26343410291226,8.85175691434265,15.7283945393698,9.63303539926752,13.244920584919,10.9836413402373,23.7322671572111,19.2460013843917,23.0358859135017,23.2657269551423,33.9335693092624,35.2021905050183,47.273780641735,27.1223170122179,27.179794785752,24.5078422326845,14.1381379225595,16.7489300545757,19.5872164033981,24.59593086239,20.4562952485944,2.65490276679926,13.352934988524,8.16273603804828,8.29862350925952,13.2885851796348,12.912276213645,15.7641258832615,15.6319503675327,12.1209108650805,7.58488219045958,3.16255825724996,4.12542172992747,5.7874732978144,15.8453762747553,19.9212373025442,14.7892554171799,19.1527452333655,18.9070946658195,17.7712942250291,28.3152402676577,6.10146440965647,9.53244318887191,6.61585194164886,9.56340267060584,22.282090884035,18.0335645535186,18.2639686324799,11.8181447816444,9.61886760878507,14.2777482548092,4.61351378154202,18.3684312487268,9.07453184111587,4.1441060541032,4.23752105935178,6.63456702298916,8.83887835968048,7.97723278244851,9.81219814011409,2.86401185404534,19.1383276116587,20.3319467126849,12.2046035128635,10.0362382086945,12.0099410060398,12.8121129065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| ||
|short_description=p1@Ndst1 | |||
}} | }} |
Latest revision as of 13:22, 1 October 2015
Short description: | p1@Ndst1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ndst1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000066785, uc008fau.1_5end |
EntrezGene: | Ndst1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 5.62e-15 | 44 |
neurectodermal cell | 5.62e-15 | 44 |
neural cell | 2.21e-14 | 43 |
embryonic cell | 2.11e-10 | 70 |
neuron | 7.77e-09 | 33 |
neuronal stem cell | 7.77e-09 | 33 |
neuroblast | 7.77e-09 | 33 |
electrically signaling cell | 7.77e-09 | 33 |
electrically responsive cell | 7.44e-08 | 39 |
electrically active cell | 7.44e-08 | 39 |
migratory neural crest cell | 2.92e-07 | 10 |
neuron associated cell | 2.92e-07 | 10 |
glial cell (sensu Vertebrata) | 2.92e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 2.92e-07 | 10 |
glial cell | 2.92e-07 | 10 |
glioblast | 2.92e-07 | 10 |
glioblast (sensu Vertebrata) | 2.92e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
nervous system | 8.98e-10 | 75 |
ectoderm-derived structure | 9.43e-10 | 95 |
ectoderm | 9.43e-10 | 95 |
presumptive ectoderm | 9.43e-10 | 95 |
central nervous system | 7.18e-09 | 73 |
tube | 1.65e-08 | 114 |
embryo | 2.37e-08 | 320 |
anatomical conduit | 7.50e-08 | 122 |
structure with developmental contribution from neural crest | 1.04e-07 | 92 |
peripheral nervous system | 5.56e-07 | 11 |