FFCP PHASE1:Mm9::chr2:132771413..132771424,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr2:132771413..132771424,- to FFCP PHASE1:Mm9::chr2:132771413..132771424,-: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=241639 | |EntrezGene=241639 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=72 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-48bp_to_ENSMUST00000134937_5end | |||
|cluster_id=chr2:132771413..132771424,- | |||
|description=CAGE_peak_6_at_Fermt1_5end | |||
|id=chr2:132771413..132771424,- | |||
|ontology_enrichment_celltype=CL:0002563!3.51e-08!9;CL:0002251!3.51e-08!9;CL:0002076!6.70e-08!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.38e-15,15;CL:0002563,2.22e-14,9;CL:0002251,2.22e-14,9;CL:0000223,9.39e-11,20;CL:0000239,2.24e-10,6;CL:0000677,2.24e-10,6;CL:0000584,2.24e-10,6;CL:0000066,1.46e-09,25;CL:0000075,9.05e-09,7;CL:0000068,3.51e-07,3;CL:0002202,3.51e-07,3;CL:0000069,3.51e-07,3;CL:0002632,3.51e-07,3;CL:0002368,3.51e-07,3;CL:0000307,3.51e-07,3;CL:0000377,3.51e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!4.22e-28!59;UBERON:0000160!1.42e-27!43;UBERON:0004119!5.58e-15!130;UBERON:0000925!5.58e-15!130;UBERON:0006595!5.58e-15!130;UBERON:0001007!5.78e-15!128;UBERON:0001555!5.78e-15!128;UBERON:0007026!5.78e-15!128;UBERON:0004921!8.77e-14!126;UBERON:0004185!8.77e-14!126;UBERON:0000344!8.41e-13!15;UBERON:0001242!2.74e-11!13;UBERON:0000060!2.74e-11!13;UBERON:0001262!2.74e-11!13;UBERON:0004786!2.74e-11!13;UBERON:0003350!3.51e-08!9;UBERON:0004808!3.51e-08!9;UBERON:0001277!3.51e-08!9;UBERON:0002108!1.13e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.09e-35,47;UBERON:0000160,2.88e-35,31;UBERON:0000344,2.48e-23,15;UBERON:0001242,2.14e-20,13;UBERON:0001262,2.14e-20,13;UBERON:0004786,2.14e-20,13;UBERON:0003350,2.22e-14,9;UBERON:0004808,2.22e-14,9;UBERON:0001277,2.22e-14,9;UBERON:0001007,2.89e-14,116;UBERON:0001555,2.89e-14,116;UBERON:0007026,2.89e-14,116;UBERON:0004119,7.43e-14,118;UBERON:0000925,7.43e-14,118;UBERON:0006595,7.43e-14,118;UBERON:0004923,4.31e-13,24;UBERON:0004921,1.32e-12,114;UBERON:0000485,2.05e-11,11;UBERON:0003126,3.51e-07,3;UBERON:0001005,3.51e-07,3;UBERON:0007196,3.51e-07,3;UBERON:0001558,3.51e-07,3;UBERON:0002108,5.66e-07,4 | |||
|phase1_expression=0,1.74487703819681,1.36499771816861,3.62957053568196,4.50806156951712,3.52546471014969,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,2.87986361028132,2.2940928106717,0.57423196411502,0.430761996159075,3.01659725760245,1.71021077510736,2.26827116783938,3.54768817048488,0,0,0,1.73310971850765,2.32728503501889,2.45003227514843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,28.1438353314578,26.0960661439352,21.7375511356357,0.91347103775248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59175283654366,0,0,4.34276993854605,0,0,0,0,0,0,0,0,0,0,0.611036183101898,0.622034853050465,0.252722758433675,1.47309299120532,0,0,0,0,0,0,0,0,0,0,0.351902248327898,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0,9.58214470653014,2.11560453330835,0.213288250535234,0.928946687441754,1.15980715189884,1.00841762311671,1.11189021922435,1.71203063501303,0.949058123089023,2.47048432086016,5.7807098024062,3.58121649674071,5.06906626509712,0.898819408654221,3.45820879799511,3.98282546508734,0,0,0,0.203651327845314,0,0.701358198903186,1.01178459398812,2.06654207171443,2.82597710114475,2.71473760627961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0.325929952884052,0,0,0,0,0,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746076687442,0,0.162886959353576,4.45419332025846,0,0.485561272309963,0.604647113929502,0.943025398779491,1.18120757152309,0.307435147943927,1.03371317267288,0,1.06949213515416,1.26414703174326,2.10837217149998,2.06271086496374,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0.161464426695906,0.301564624640779,0.358117032009409,0.492422699235184,2.04036585640896,0,0,0,0,0,0,0,0.169978429993855,0,0,5.72802370809068,0,0.609958401380546,1.08005340821801,0.836353184057875,1.9652630737156,2.02296519577231,2.64491058321075,3.40282724579238,6.86959358446502,0,0,0,0,0,0,0.168956125490778,0.234714477291508,0,0,0,0,0,0,0.205421914329655,0,0,0.39736270956253,0.120195449519969,0.147689527174577,0,0.15241361331,0.201652370273681,0.38983152295901,0.192423683280659,0.584384510907845,0.226730383615211,0.221985953374065,0.0897138566094757,0.167884616364078,0.19318959403219,0.93841237725591,3.29672923681077,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.367687016900028,0.44449345560323,0.412070114477788,0.320919209591815,0,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.17230640686684,0,0.115884325944855,0.578727661391115,0,0.147198920134397,0,0.354951612318675,0.238436189947321,0,0.0941093804153306,0.169229215783353,0.548783918618318,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0,0,0,0,0.191288332068843,0,0 | |phase1_expression=0,1.74487703819681,1.36499771816861,3.62957053568196,4.50806156951712,3.52546471014969,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,2.87986361028132,2.2940928106717,0.57423196411502,0.430761996159075,3.01659725760245,1.71021077510736,2.26827116783938,3.54768817048488,0,0,0,1.73310971850765,2.32728503501889,2.45003227514843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,28.1438353314578,26.0960661439352,21.7375511356357,0.91347103775248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59175283654366,0,0,4.34276993854605,0,0,0,0,0,0,0,0,0,0,0.611036183101898,0.622034853050465,0.252722758433675,1.47309299120532,0,0,0,0,0,0,0,0,0,0,0.351902248327898,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0,9.58214470653014,2.11560453330835,0.213288250535234,0.928946687441754,1.15980715189884,1.00841762311671,1.11189021922435,1.71203063501303,0.949058123089023,2.47048432086016,5.7807098024062,3.58121649674071,5.06906626509712,0.898819408654221,3.45820879799511,3.98282546508734,0,0,0,0.203651327845314,0,0.701358198903186,1.01178459398812,2.06654207171443,2.82597710114475,2.71473760627961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0.325929952884052,0,0,0,0,0,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746076687442,0,0.162886959353576,4.45419332025846,0,0.485561272309963,0.604647113929502,0.943025398779491,1.18120757152309,0.307435147943927,1.03371317267288,0,1.06949213515416,1.26414703174326,2.10837217149998,2.06271086496374,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0.161464426695906,0.301564624640779,0.358117032009409,0.492422699235184,2.04036585640896,0,0,0,0,0,0,0,0.169978429993855,0,0,5.72802370809068,0,0.609958401380546,1.08005340821801,0.836353184057875,1.9652630737156,2.02296519577231,2.64491058321075,3.40282724579238,6.86959358446502,0,0,0,0,0,0,0.168956125490778,0.234714477291508,0,0,0,0,0,0,0.205421914329655,0,0,0.39736270956253,0.120195449519969,0.147689527174577,0,0.15241361331,0.201652370273681,0.38983152295901,0.192423683280659,0.584384510907845,0.226730383615211,0.221985953374065,0.0897138566094757,0.167884616364078,0.19318959403219,0.93841237725591,3.29672923681077,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.367687016900028,0.44449345560323,0.412070114477788,0.320919209591815,0,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.17230640686684,0,0.115884325944855,0.578727661391115,0,0.147198920134397,0,0.354951612318675,0.238436189947321,0,0.0941093804153306,0.169229215783353,0.548783918618318,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0,0,0,0,0.191288332068843,0,0 | ||
|short_description=p6@Fermt1 | |||
}} | }} |
Latest revision as of 19:01, 25 September 2015
Short description: | p6@Fermt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Fermt1_5end |
Coexpression cluster: | MCL_coexpression_mm9:72 |
Association with transcript: | -48bp_to_ENSMUST00000134937_5end |
EntrezGene: | Fermt1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.38e-15 | 15 |
intestinal epithelial cell | 2.22e-14 | 9 |
epithelial cell of alimentary canal | 2.22e-14 | 9 |
endodermal cell | 9.39e-11 | 20 |
brush border epithelial cell | 2.24e-10 | 6 |
gut absorptive cell | 2.24e-10 | 6 |
enterocyte | 2.24e-10 | 6 |
epithelial cell | 1.46e-09 | 25 |
columnar/cuboidal epithelial cell | 9.05e-09 | 7 |
duct epithelial cell | 3.51e-07 | 3 |
epithelial cell of tracheobronchial tree | 3.51e-07 | 3 |
branched duct epithelial cell | 3.51e-07 | 3 |
epithelial cell of lower respiratory tract | 3.51e-07 | 3 |
respiratory epithelial cell | 3.51e-07 | 3 |
tracheal epithelial cell | 3.51e-07 | 3 |
tracheoblast | 3.51e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.09e-35 | 47 |
intestine | 2.88e-35 | 31 |
mucosa | 2.48e-23 | 15 |
intestinal mucosa | 2.14e-20 | 13 |
wall of intestine | 2.14e-20 | 13 |
gastrointestinal system mucosa | 2.14e-20 | 13 |
epithelium of mucosa | 2.22e-14 | 9 |
gastrointestinal system epithelium | 2.22e-14 | 9 |
intestinal epithelium | 2.22e-14 | 9 |
digestive system | 2.89e-14 | 116 |
digestive tract | 2.89e-14 | 116 |
primitive gut | 2.89e-14 | 116 |
endoderm-derived structure | 7.43e-14 | 118 |
endoderm | 7.43e-14 | 118 |
presumptive endoderm | 7.43e-14 | 118 |
organ component layer | 4.31e-13 | 24 |
subdivision of digestive tract | 1.32e-12 | 114 |
simple columnar epithelium | 2.05e-11 | 11 |
trachea | 3.51e-07 | 3 |
respiratory airway | 3.51e-07 | 3 |
tracheobronchial tree | 3.51e-07 | 3 |
lower respiratory tract | 3.51e-07 | 3 |
small intestine | 5.66e-07 | 4 |