FFCP PHASE1:Mm9::chr3:141948405..141948408,-: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr3:141948405..141948408,- to FFCP PHASE1:Mm9::chr3:141948405..141948408,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=445 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:141948405..141948408,- | |||
|description=CAGE_peak_at_chr3:141948405..141948408,- | |||
|id=chr3:141948405..141948408,- | |||
|ontology_enrichment_celltype=CL:0000075!3.69e-14!7;CL:0000239!1.69e-12!6;CL:0000677!1.69e-12!6;CL:0000212!1.69e-12!6;CL:0000584!1.69e-12!6;CL:0000548!7.15e-11!115;CL:0000004!7.15e-11!115;CL:0000255!7.15e-11!115;CL:0002371!2.06e-10!118;CL:0000144!5.63e-10!121;CL:0000012!5.63e-10!121;CL:0000680!1.35e-09!6;CL:0000183!1.35e-09!6;CL:0000187!1.35e-09!6;CL:0000056!1.35e-09!6;CL:0000066!3.21e-08!25;CL:0000222!3.70e-08!7;CL:0000192!4.28e-08!3;CL:0000359!4.28e-08!3;CL:0002539!4.28e-08!3;CL:0000514!4.28e-08!3;CL:0002563!4.39e-08!9;CL:0002251!4.39e-08!9;CL:0000063!1.84e-07!66;CL:0000473!4.14e-07!3;CL:0000627!4.14e-07!3;CL:0000682!4.14e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,7.36e-18,3;CL:0000359,7.36e-18,3;CL:0002539,7.36e-18,3;CL:0000514,7.36e-18,3;CL:0000680,1.96e-09,6;CL:0000187,1.96e-09,6;CL:0000056,1.96e-09,6;CL:0000222,3.21e-08,7;CL:0000473,3.78e-08,7;CL:0002476,1.14e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.16e-15!15;UBERON:0001242!4.29e-12!13;UBERON:0000060!4.29e-12!13;UBERON:0001262!4.29e-12!13;UBERON:0004786!4.29e-12!13;UBERON:0004923!1.00e-08!24;UBERON:0000485!1.28e-08!11;UBERON:0001135!4.28e-08!3;UBERON:0004237!4.28e-08!3;UBERON:0004695!4.28e-08!3;UBERON:0002111!4.28e-08!3;UBERON:0004178!4.28e-08!3;UBERON:0003350!4.39e-08!9;UBERON:0004808!4.39e-08!9;UBERON:0001277!4.39e-08!9;UBERON:0000331!2.41e-07!3;UBERON:0002116!2.41e-07!3;UBERON:0001204!2.41e-07!3;UBERON:0001168!2.41e-07!3;UBERON:0002329!7.27e-07!11;UBERON:0003077!7.27e-07!11;UBERON:0003059!7.27e-07!11;UBERON:0007282!7.27e-07!11;UBERON:0009618!7.27e-07!11;UBERON:0007285!7.27e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,7.36e-18,3;UBERON:0004237,7.36e-18,3;UBERON:0004695,7.36e-18,3;UBERON:0002111,7.36e-18,3;UBERON:0004178,7.36e-18,3;UBERON:0000947,1.17e-13,4;UBERON:0001637,1.17e-13,4;UBERON:0004573,1.17e-13,4;UBERON:0003509,1.17e-13,4;UBERON:0004571,1.17e-13,4;UBERON:0010191,1.17e-13,4;UBERON:0004572,1.17e-13,4;UBERON:0000055,3.96e-11,5;UBERON:0007500,3.96e-11,5;UBERON:0001981,3.96e-11,5;UBERON:0002049,3.96e-11,5;UBERON:0007798,3.96e-11,5;UBERON:0004537,3.96e-11,5;UBERON:0006965,3.96e-11,5 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,0.90739263392049,0.500895729946347,0.16787927191189,0.467225281191051,0.903863264091034,0,0.936258105287974,0,0.159544317990673,0,0.786783621770977,0,0,0,0,0,0,1.61582251287033,0,0,0.319984845586813,0.45881856213434,1.14846392823004,0.430761996159075,0.215471232685889,0.380046838912748,0.504060259519861,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,1.51076181570693,0.709638518536602,5.68994931701213,0,0,0,0.194429899074283,0,0,0,0,0,0.257259436035947,0,0.515672092277442,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0.294628585473668,0.284743361598206,0,0.075726193333184,0.226714680320357,0,0,0.679971333707751,0,0,0,1.12355536105401,0.511290967734173,0.259786004602869,0,0.281686839553361,0,0,0,0,0,0,1.1418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.01582567878545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,0,0,0,0,0,0.755393897389701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.348975407639361,0.454999239389536,0.90739263392049,0.500895729946347,0.16787927191189,0.467225281191051,0.903863264091034,0,0.936258105287974,0,0.159544317990673,0,0.786783621770977,0,0,0,0,0,0,1.61582251287033,0,0,0.319984845586813,0.45881856213434,1.14846392823004,0.430761996159075,0.215471232685889,0.380046838912748,0.504060259519861,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,1.51076181570693,0.709638518536602,5.68994931701213,0,0,0,0.194429899074283,0,0,0,0,0,0.257259436035947,0,0.515672092277442,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0.294628585473668,0.284743361598206,0,0.075726193333184,0.226714680320357,0,0,0.679971333707751,0,0,0,1.12355536105401,0.511290967734173,0.259786004602869,0,0.281686839553361,0,0,0,0,0,0,1.1418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.01582567878545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,0,0,0,0,0,0.755393897389701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:141948405..141948408,- | |||
}} | }} |
Latest revision as of 03:27, 6 August 2015
Short description: | p@chr3:141948405..141948408, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:141948405..141948408, - |
Coexpression cluster: | MCL_coexpression_mm9:445 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 7.36e-18 | 3 |
vascular associated smooth muscle cell | 7.36e-18 | 3 |
aortic smooth muscle cell | 7.36e-18 | 3 |
smooth muscle myoblast | 7.36e-18 | 3 |
muscle precursor cell | 1.96e-09 | 6 |
muscle cell | 1.96e-09 | 6 |
myoblast | 1.96e-09 | 6 |
mesodermal cell | 3.21e-08 | 7 |
defensive cell | 3.78e-08 | 7 |
bone marrow macrophage | 1.14e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 7.36e-18 | 3 |
blood vessel smooth muscle | 7.36e-18 | 3 |
arterial system smooth muscle | 7.36e-18 | 3 |
artery smooth muscle tissue | 7.36e-18 | 3 |
aorta smooth muscle tissue | 7.36e-18 | 3 |
aorta | 1.17e-13 | 4 |
artery | 1.17e-13 | 4 |
systemic artery | 1.17e-13 | 4 |
arterial blood vessel | 1.17e-13 | 4 |
systemic arterial system | 1.17e-13 | 4 |
aortic system | 1.17e-13 | 4 |
arterial system | 1.17e-13 | 4 |
vessel | 3.96e-11 | 5 |
epithelial tube open at both ends | 3.96e-11 | 5 |
blood vessel | 3.96e-11 | 5 |
vasculature | 3.96e-11 | 5 |
vascular system | 3.96e-11 | 5 |
blood vasculature | 3.96e-11 | 5 |
vascular cord | 3.96e-11 | 5 |