FFCP PHASE1:Mm9::chr6:119146409..119146440,-: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr6:119146409..119146440,- to FFCP PHASE1:Mm9::chr6:119146409..119146440,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=12288 | |EntrezGene=12288 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=19 | |||
|TSSclassifier=NA | |||
|UniProt=Q0PCR6,Q3UY08 | |UniProt=Q0PCR6,Q3UY08 | ||
|association_with_transcript=0bp_to_NM_001255997,NM_001255998,NM_001255999,NM_009781,uc009dlu.2_5end | |||
|cluster_id=chr6:119146409..119146440,- | |||
|description=CAGE_peak_3_at_Cacna1c_5end | |||
|id=chr6:119146409..119146440,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!1.27e-21!18;UBERON:0000948!1.27e-21!18;UBERON:0005498!1.27e-21!18;UBERON:0004140!1.27e-21!18;UBERON:0009881!1.27e-21!18;UBERON:0004141!1.27e-21!18;UBERON:0003084!1.27e-21!18;UBERON:0007005!1.27e-21!18;UBERON:0004139!1.27e-21!18;UBERON:0004291!1.27e-21!18;UBERON:0004535!8.84e-16!23;UBERON:0001009!8.84e-16!23;UBERON:0002048!8.36e-12!14;UBERON:0000117!8.36e-12!14;UBERON:0000171!8.36e-12!14;UBERON:0000170!8.36e-12!14;UBERON:0005597!8.36e-12!14;UBERON:0000118!8.36e-12!14;UBERON:0004872!1.70e-09!33;UBERON:0005153!3.38e-09!17;UBERON:0005178!3.38e-09!17;UBERON:0005181!3.38e-09!17;UBERON:0002224!3.38e-09!17;UBERON:0000915!3.38e-09!17;UBERON:0008947!3.38e-09!17;UBERON:0003258!3.38e-09!17;UBERON:0003103!3.88e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,5.75e-72,18;UBERON:0000948,5.75e-72,18;UBERON:0005498,5.75e-72,18;UBERON:0004140,5.75e-72,18;UBERON:0009881,5.75e-72,18;UBERON:0004141,5.75e-72,18;UBERON:0003084,5.75e-72,18;UBERON:0007005,5.75e-72,18;UBERON:0004139,5.75e-72,18;UBERON:0004291,5.75e-72,18;UBERON:0004535,4.76e-56,23;UBERON:0001009,4.76e-56,23;UBERON:0004872,1.16e-38,33;UBERON:0003103,2.42e-29,43;UBERON:0003914,1.01e-26,47;UBERON:0003081,1.02e-13,87;UBERON:0010314,6.98e-13,92;UBERON:0000025,4.57e-10,114;UBERON:0000926,1.78e-09,120;UBERON:0004120,1.78e-09,120;UBERON:0006603,1.78e-09,120;UBERON:0004111,2.72e-09,122;UBERON:0001048,2.68e-08,134 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.49215667395558,11.0227248191115,9.54328925743379,15.1516630774535,19.479658942993,16.3523139660621,24.6485981435432,15.8281306825775,28.0236821681207,28.9625335847726,22.1626076506779,25.860950245128,28.2165975730891,26.3460138349261,27.6465222646366,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0.407302655690628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.162964976442026,0.678980343100753,0.234690248288502,0.502518772325447,0.238043640886014,0.780534591431195,0.472905432318573,0.44292937929755,0.637819074629948,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.989820737835213,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0.179026695667481,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.915758121336325,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.170733605754134,0,0,0,0.222246727801615,0.618105171716683,0.64183841918363,0,0.25347929989024,0,0.0936415074698824,0.320125762024346,0.459483751644906,0,0.115884325944855,0.578727661391115,0.412085900803307,0.294397840268795,0.342869252385415,0,0.476872379894642,0,0.282328141245992,0.169229215783353,0.365855945745545,0.526139422875686,0.407412341537585,0.561142271657738,0.118635018124174,0.29551344712669,0,0,0,0,0.467863216890817,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.49215667395558,11.0227248191115,9.54328925743379,15.1516630774535,19.479658942993,16.3523139660621,24.6485981435432,15.8281306825775,28.0236821681207,28.9625335847726,22.1626076506779,25.860950245128,28.2165975730891,26.3460138349261,27.6465222646366,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0.407302655690628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.162964976442026,0.678980343100753,0.234690248288502,0.502518772325447,0.238043640886014,0.780534591431195,0.472905432318573,0.44292937929755,0.637819074629948,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.989820737835213,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0.179026695667481,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.915758121336325,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.170733605754134,0,0,0,0.222246727801615,0.618105171716683,0.64183841918363,0,0.25347929989024,0,0.0936415074698824,0.320125762024346,0.459483751644906,0,0.115884325944855,0.578727661391115,0.412085900803307,0.294397840268795,0.342869252385415,0,0.476872379894642,0,0.282328141245992,0.169229215783353,0.365855945745545,0.526139422875686,0.407412341537585,0.561142271657738,0.118635018124174,0.29551344712669,0,0,0,0,0.467863216890817,0.214871054048298,0,0,0 | ||
|short_description=p3@Cacna1c | |||
}} | }} |
Latest revision as of 13:16, 26 September 2015
Short description: | p3@Cacna1c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Cacna1c_5end |
Coexpression cluster: | MCL_coexpression_mm9:19 |
Association with transcript: | 0bp_to_NM_001255997, NM_001255998, NM_001255999, NM_009781, uc009dlu.2_5end |
EntrezGene: | Cacna1c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 5.75e-72 | 18 |
heart | 5.75e-72 | 18 |
primitive heart tube | 5.75e-72 | 18 |
primary heart field | 5.75e-72 | 18 |
anterior lateral plate mesoderm | 5.75e-72 | 18 |
heart tube | 5.75e-72 | 18 |
heart primordium | 5.75e-72 | 18 |
cardiac mesoderm | 5.75e-72 | 18 |
cardiogenic plate | 5.75e-72 | 18 |
heart rudiment | 5.75e-72 | 18 |
cardiovascular system | 4.76e-56 | 23 |
circulatory system | 4.76e-56 | 23 |
splanchnic layer of lateral plate mesoderm | 1.16e-38 | 33 |
compound organ | 2.42e-29 | 43 |
epithelial tube | 1.01e-26 | 47 |
lateral plate mesoderm | 1.02e-13 | 87 |
structure with developmental contribution from neural crest | 6.98e-13 | 92 |
tube | 4.57e-10 | 114 |
mesoderm | 1.78e-09 | 120 |
mesoderm-derived structure | 1.78e-09 | 120 |
presumptive mesoderm | 1.78e-09 | 120 |
anatomical conduit | 2.72e-09 | 122 |
primordium | 2.68e-08 | 134 |