FFCP PHASE1:Mm9::chr6:136890045..136890059,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=11857 | |EntrezGene=11857 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt=Q61599 | |UniProt=Q61599 | ||
|association_with_transcript=-21bp_to_ENSMUST00000111892_5end | |||
|cluster_id=chr6:136890045..136890059,- | |||
|description=CAGE_peak_10_at_Arhgdib_5end | |||
|id=chr6:136890045..136890059,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,1.11e-17,9;CL:0002494,4.66e-09,3;CL:0000737,4.66e-09,3;CL:0000746,4.66e-09,3;CL:0000513,4.66e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.57e-20,3;DOID:4045,2.57e-20,3;DOID:0050686,1.86e-10,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.11e-17,9;UBERON:0002036,1.11e-17,9;UBERON:0002385,1.11e-17,9;UBERON:0000486,1.11e-17,9;UBERON:0007503,1.11e-17,9;UBERON:0001015,1.11e-17,9;UBERON:0002329,1.11e-17,9;UBERON:0003082,1.11e-17,9;UBERON:0003059,1.11e-17,9;UBERON:0007282,1.11e-17,9;UBERON:0004290,1.11e-17,9;UBERON:0009618,1.11e-17,9;UBERON:0000383,6.46e-16,10;UBERON:0007524,1.80e-14,11;UBERON:0003077,1.80e-14,11;UBERON:0007285,1.80e-14,11;UBERON:0002204,8.85e-07,32 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.387369970324729,0,0,0,0,0,0.174840804837995,0,0,0,0,0.137114433605739,0,0.0850432901510698,0.496454756004426,0.783599367416806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9744805528441,5.4693474116666,9.94695113550217,8.82347232046521,12.294818729252,12.1377588257788,0,0,0,0.782391344348039,0,0.439372365468944,0,0.699932108126813,0,0.671130424230945,0,0.336093799142464,0.257259436035947,1.43266719969378,1.03134418455488,0,0,0,0.338844532069132,0,0,0,0.7104801149461,0,0,0,0,0,0,0.441737081903227,0,0,0,0,0,0.307213066512487,0,0,0.52091337055676,0,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,0.140444420131752,0,0.519572009205738,0,0,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0.352766121407114,0.251333182659351,0,0,0,0.161766849947409,0.441683036920787,0.969750506270444,0,0,0,0,1.1981512450592,1.19980546198682,1.52484272487678,0.299581278809645,0,0.125654352112864,0,0,0,0,0.203678727700633,0.373220911830279,0,0,0.130120442962704,0,0.180062129805349,0.30140963567143,0.0680364991513279,0,0.0937017245597288,0,0,0.189106080167819,0,0.43839146485515,0,0,0.411564272815887,0.199034266818493,0,1.02939162845886,0.568326998791185,0,0.234526059981096,0.180062061461015,0,0.393528463494808,0.154267112887378,0.465067889500816,0,0.116765342367169,0.329119699826961,0.656669856316381,0.243206428637567,0,0,0.268412837520744,0,0,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0.474529061544512,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0,0,0,0,0,0.387904974335251,0.280543279561274,0.379419222745544,0,0,0.246794327843601,0,0.166845105716094,0.196558995113203,0.224862112384854,0.405720242777006,0,0.50925170356284,0,0,0,0,0.744281895337007,0,0,0.179397413521912,0,0,0,0,0.339490171550376,0,0.167506257441816,0,0,0.157635144106191,0,0.159454768657487,0.327726629431476,0,0.289298117163023,0,0.54390568381871,0,0.275936746304732,0.160550589987792,0.35163505977661,2.45902418065013,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.35613120733451,0.325773918707152,0.164970122972535,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0,0,0,0.712994756769443,0.316036757935816,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0.658196082408484,0.608929898229199,0.938686832254841,0,0,0.49465875882444,0.161464426695906,0.301564624640779,0.477489376012546,0.328281799490123,0.291480836629851,0,0.170870880797853,0.206386867963223,0.740778109478847,0.188368457004691,0.683471138605126,0.457556346413045,1.69978429993855,0.979660166265606,0.690999869022119,0,0.158167996790568,0.203319467126849,0,0.418176592028937,0,0.134864346384821,0.330613822901344,0.26175594198403,0,0,0,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0,0.2604087696879,0,0,0,0,0.810900861160657,0.821687657318618,0.389762468933385,0.179026695667481,0.198681354781265,0.841368146639782,0.443068581523732,0.504832249740738,0.15241361331,0.504130925684203,0.487289403698762,0.192423683280659,0.350630706544707,0,0,0.179427713218951,0.167884616364078,0.386379188064381,0.187682475451182,0.183151624267265,0,0,0,0,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0.31136204275253,0,0,0.243106717068294,0.419226325255965,0.183843508450014,0,0,0.962757628775446,0,0,0.188626341386076,0.280924522409647,0.0640251524048693,0.114870937911227,0,0,0.192909220463705,0.824171801606613,0.294397840268795,0.342869252385415,0,0.238436189947321,0.145346416632329,0.188218760830661,0,0,0,0.271608227691724,0,0,0.0985044823755635,0,0.154936841185966,0,0.499621155875892,0.233931608445408,0.429742108096597,0,0.441182838239031,0.695603506861264 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0.387369970324729,0,0,0,0,0,0.174840804837995,0,0,0,0,0.137114433605739,0,0.0850432901510698,0.496454756004426,0.783599367416806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9744805528441,5.4693474116666,9.94695113550217,8.82347232046521,12.294818729252,12.1377588257788,0,0,0,0.782391344348039,0,0.439372365468944,0,0.699932108126813,0,0.671130424230945,0,0.336093799142464,0.257259436035947,1.43266719969378,1.03134418455488,0,0,0,0.338844532069132,0,0,0,0.7104801149461,0,0,0,0,0,0,0.441737081903227,0,0,0,0,0,0.307213066512487,0,0,0.52091337055676,0,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,0.140444420131752,0,0.519572009205738,0,0,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0.352766121407114,0.251333182659351,0,0,0,0.161766849947409,0.441683036920787,0.969750506270444,0,0,0,0,1.1981512450592,1.19980546198682,1.52484272487678,0.299581278809645,0,0.125654352112864,0,0,0,0,0.203678727700633,0.373220911830279,0,0,0.130120442962704,0,0.180062129805349,0.30140963567143,0.0680364991513279,0,0.0937017245597288,0,0,0.189106080167819,0,0.43839146485515,0,0,0.411564272815887,0.199034266818493,0,1.02939162845886,0.568326998791185,0,0.234526059981096,0.180062061461015,0,0.393528463494808,0.154267112887378,0.465067889500816,0,0.116765342367169,0.329119699826961,0.656669856316381,0.243206428637567,0,0,0.268412837520744,0,0,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0.474529061544512,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0,0,0,0,0,0.387904974335251,0.280543279561274,0.379419222745544,0,0,0.246794327843601,0,0.166845105716094,0.196558995113203,0.224862112384854,0.405720242777006,0,0.50925170356284,0,0,0,0,0.744281895337007,0,0,0.179397413521912,0,0,0,0,0.339490171550376,0,0.167506257441816,0,0,0.157635144106191,0,0.159454768657487,0.327726629431476,0,0.289298117163023,0,0.54390568381871,0,0.275936746304732,0.160550589987792,0.35163505977661,2.45902418065013,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.35613120733451,0.325773918707152,0.164970122972535,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0,0,0,0.712994756769443,0.316036757935816,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0.658196082408484,0.608929898229199,0.938686832254841,0,0,0.49465875882444,0.161464426695906,0.301564624640779,0.477489376012546,0.328281799490123,0.291480836629851,0,0.170870880797853,0.206386867963223,0.740778109478847,0.188368457004691,0.683471138605126,0.457556346413045,1.69978429993855,0.979660166265606,0.690999869022119,0,0.158167996790568,0.203319467126849,0,0.418176592028937,0,0.134864346384821,0.330613822901344,0.26175594198403,0,0,0,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0,0.2604087696879,0,0,0,0,0.810900861160657,0.821687657318618,0.389762468933385,0.179026695667481,0.198681354781265,0.841368146639782,0.443068581523732,0.504832249740738,0.15241361331,0.504130925684203,0.487289403698762,0.192423683280659,0.350630706544707,0,0,0.179427713218951,0.167884616364078,0.386379188064381,0.187682475451182,0.183151624267265,0,0,0,0,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0.31136204275253,0,0,0.243106717068294,0.419226325255965,0.183843508450014,0,0,0.962757628775446,0,0,0.188626341386076,0.280924522409647,0.0640251524048693,0.114870937911227,0,0,0.192909220463705,0.824171801606613,0.294397840268795,0.342869252385415,0,0.238436189947321,0.145346416632329,0.188218760830661,0,0,0,0.271608227691724,0,0,0.0985044823755635,0,0.154936841185966,0,0.499621155875892,0.233931608445408,0.429742108096597,0,0.441182838239031,0.695603506861264 | ||
|short_description=p10@Arhgdib | |||
}} | }} |
Latest revision as of 20:34, 26 September 2015
Short description: | p10@Arhgdib |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Arhgdib_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | -21bp_to_ENSMUST00000111892_5end |
EntrezGene: | Arhgdib |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 1.11e-17 | 9 |
cardiocyte | 4.66e-09 | 3 |
striated muscle cell | 4.66e-09 | 3 |
cardiac muscle cell | 4.66e-09 | 3 |
cardiac muscle myoblast | 4.66e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.11e-17 | 9 |
striated muscle tissue | 1.11e-17 | 9 |
muscle tissue | 1.11e-17 | 9 |
multilaminar epithelium | 1.11e-17 | 9 |
epithelial vesicle | 1.11e-17 | 9 |
musculature | 1.11e-17 | 9 |
somite | 1.11e-17 | 9 |
myotome | 1.11e-17 | 9 |
presomitic mesoderm | 1.11e-17 | 9 |
presumptive segmental plate | 1.11e-17 | 9 |
dermomyotome | 1.11e-17 | 9 |
trunk paraxial mesoderm | 1.11e-17 | 9 |
musculature of body | 6.46e-16 | 10 |
dense mesenchyme tissue | 1.80e-14 | 11 |
paraxial mesoderm | 1.80e-14 | 11 |
presumptive paraxial mesoderm | 1.80e-14 | 11 |
musculoskeletal system | 8.85e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.57e-20 | 3 |
muscle cancer | 2.57e-20 | 3 |
organ system cancer | 1.86e-10 | 6 |