FFCP PHASE1:Mm9::chr6:18120782..18120798,+: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr6:18120782..18120798,+ to FFCP PHASE1:Mm9::chr6:18120782..18120798,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=12638 | |EntrezGene=12638 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1705 | |||
|TSSclassifier=NA | |||
|UniProt=E9PY75 | |UniProt=E9PY75 | ||
|association_with_transcript=13bp_to_ENSMUST00000167351_5end | |||
|cluster_id=chr6:18120782..18120798,+ | |||
|description=CAGE_peak_4_at_Cftr_5end | |||
|id=chr6:18120782..18120798,+ | |||
|ontology_enrichment_celltype=CL:0002563!3.89e-10!9;CL:0002251!3.89e-10!9;CL:0000239!8.47e-07!6;CL:0000677!8.47e-07!6;CL:0000212!8.47e-07!6;CL:0000584!8.47e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.40e-17,9;CL:0002251,2.40e-17,9;CL:0000066,4.53e-12,25;CL:0000239,5.42e-10,6;CL:0000677,5.42e-10,6;CL:0000584,5.42e-10,6;CL:0002076,7.64e-10,15;CL:0002250,2.80e-09,3;CL:0000223,9.98e-09,20;CL:0000075,1.62e-08,7;CL:0000682,5.13e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.22e-17!43;UBERON:0005409!4.81e-16!59;UBERON:0000344!4.71e-14!15;UBERON:0001242!6.24e-12!13;UBERON:0000060!6.24e-12!13;UBERON:0001262!6.24e-12!13;UBERON:0004786!6.24e-12!13;UBERON:0001007!3.84e-11!128;UBERON:0001555!3.84e-11!128;UBERON:0007026!3.84e-11!128;UBERON:0004119!1.05e-10!130;UBERON:0000925!1.05e-10!130;UBERON:0006595!1.05e-10!130;UBERON:0003350!3.89e-10!9;UBERON:0004808!3.89e-10!9;UBERON:0001277!3.89e-10!9;UBERON:0004921!6.39e-10!126;UBERON:0004185!6.39e-10!126;UBERON:0000485!9.13e-08!11;UBERON:0004923!6.43e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.34e-34,31;UBERON:0000344,3.25e-27,15;UBERON:0005409,8.55e-26,47;UBERON:0001242,2.04e-22,13;UBERON:0001262,2.04e-22,13;UBERON:0004786,2.04e-22,13;UBERON:0003350,2.40e-17,9;UBERON:0004808,2.40e-17,9;UBERON:0001277,2.40e-17,9;UBERON:0004923,7.15e-16,24;UBERON:0000485,6.18e-14,11;UBERON:0001007,3.80e-12,116;UBERON:0001555,3.80e-12,116;UBERON:0007026,3.80e-12,116;UBERON:0004119,7.85e-12,118;UBERON:0000925,7.85e-12,118;UBERON:0006595,7.85e-12,118;UBERON:0002108,1.32e-10,4;UBERON:0004921,3.77e-10,114;UBERON:0000331,9.23e-09,3;UBERON:0002116,9.23e-09,3;UBERON:0001204,9.23e-09,3;UBERON:0001168,9.23e-09,3;UBERON:0007023,7.69e-07,51 | |||
|phase1_expression=0,1.74487703819681,1.81999695755814,1.51232105653415,0.500895729946347,4.8684988854448,6.07392865548367,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,7.83962871687693,5.73523202667925,3.44539178469012,2.58457197695445,3.878482188346,6.46079626151671,4.78857246543868,6.65191531965914,0,0,0,8.95440021228951,9.97407872150954,13.8835162258411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,11.1835056730873,0,0,4.85368404896324,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0.497627882440372,1.26361379216837,0,0,0,0.180062129805349,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,0,2.11560453330835,0.213288250535234,0.232236671860439,0.77320476793256,0.605050573870028,1.33426826306922,0.760902504450237,3.32170343081158,1.15289268306808,0.754005626400808,0.795825888164603,1.75467678407208,2.69645822596266,3.45820879799511,4.18196673834171,0.189667900953082,0.228497025219458,0,0.203651327845314,0.193952487167626,0.140271639780637,0.126473074248515,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0,0,0,0.37898282354097,0.325929952884052,0.169745085775188,0.469380496577004,0,0.952174563544055,0,1.26108115284953,0.8858587585951,0.318909537314974,0,0.345369963731791,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2710413633323,0.178065603667255,0.162886959353576,3.62934270539578,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,2.86401185404534,0,0.203319467126849,0.324016022465404,0,0.218362563746178,0,0.826534557253359,0,9.33227807700909,6.21339313086926,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0.187682475451182,2.74727436400898,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0,0,0.0640251524048693,0.114870937911227,0,0,0.38581844092741,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0.290692833264657,0.0941093804153306,0,0,0,0,0,0,0.0985044823755635,0,0,0.385813221962283,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0 | |phase1_expression=0,1.74487703819681,1.81999695755814,1.51232105653415,0.500895729946347,4.8684988854448,6.07392865548367,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,7.83962871687693,5.73523202667925,3.44539178469012,2.58457197695445,3.878482188346,6.46079626151671,4.78857246543868,6.65191531965914,0,0,0,8.95440021228951,9.97407872150954,13.8835162258411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,11.1835056730873,0,0,4.85368404896324,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0.497627882440372,1.26361379216837,0,0,0,0.180062129805349,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,0,2.11560453330835,0.213288250535234,0.232236671860439,0.77320476793256,0.605050573870028,1.33426826306922,0.760902504450237,3.32170343081158,1.15289268306808,0.754005626400808,0.795825888164603,1.75467678407208,2.69645822596266,3.45820879799511,4.18196673834171,0.189667900953082,0.228497025219458,0,0.203651327845314,0.193952487167626,0.140271639780637,0.126473074248515,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0,0,0,0.37898282354097,0.325929952884052,0.169745085775188,0.469380496577004,0,0.952174563544055,0,1.26108115284953,0.8858587585951,0.318909537314974,0,0.345369963731791,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2710413633323,0.178065603667255,0.162886959353576,3.62934270539578,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,2.86401185404534,0,0.203319467126849,0.324016022465404,0,0.218362563746178,0,0.826534557253359,0,9.33227807700909,6.21339313086926,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0.187682475451182,2.74727436400898,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0,0,0.0640251524048693,0.114870937911227,0,0,0.38581844092741,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0.290692833264657,0.0941093804153306,0,0,0,0,0,0,0.0985044823755635,0,0,0.385813221962283,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0 | ||
|short_description=p4@Cftr | |||
}} | }} |
Latest revision as of 23:44, 26 September 2015
Short description: | p4@Cftr |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Cftr_5end |
Coexpression cluster: | MCL_coexpression_mm9:1705 |
Association with transcript: | 13bp_to_ENSMUST00000167351_5end |
EntrezGene: | Cftr |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.40e-17 | 9 |
epithelial cell of alimentary canal | 2.40e-17 | 9 |
epithelial cell | 4.53e-12 | 25 |
brush border epithelial cell | 5.42e-10 | 6 |
gut absorptive cell | 5.42e-10 | 6 |
enterocyte | 5.42e-10 | 6 |
endo-epithelial cell | 7.64e-10 | 15 |
intestinal crypt stem cell | 2.80e-09 | 3 |
endodermal cell | 9.98e-09 | 20 |
columnar/cuboidal epithelial cell | 1.62e-08 | 7 |
M cell of gut | 5.13e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.34e-34 | 31 |
mucosa | 3.25e-27 | 15 |
gastrointestinal system | 8.55e-26 | 47 |
intestinal mucosa | 2.04e-22 | 13 |
wall of intestine | 2.04e-22 | 13 |
gastrointestinal system mucosa | 2.04e-22 | 13 |
epithelium of mucosa | 2.40e-17 | 9 |
gastrointestinal system epithelium | 2.40e-17 | 9 |
intestinal epithelium | 2.40e-17 | 9 |
organ component layer | 7.15e-16 | 24 |
simple columnar epithelium | 6.18e-14 | 11 |
digestive system | 3.80e-12 | 116 |
digestive tract | 3.80e-12 | 116 |
primitive gut | 3.80e-12 | 116 |
endoderm-derived structure | 7.85e-12 | 118 |
endoderm | 7.85e-12 | 118 |
presumptive endoderm | 7.85e-12 | 118 |
small intestine | 1.32e-10 | 4 |
subdivision of digestive tract | 3.77e-10 | 114 |
ileal mucosa | 9.23e-09 | 3 |
ileum | 9.23e-09 | 3 |
mucosa of small intestine | 9.23e-09 | 3 |
wall of small intestine | 9.23e-09 | 3 |
adult organism | 7.69e-07 | 51 |