FFCP PHASE1:Mm9::chr7:142726662..142726669,+: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr7:142726662..142726669,+ to FFCP PHASE1:Mm9::chr7:142726662..142726669,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:142726662..142726669,+ | |||
|description=CAGE_peak_at_chr7:142726662..142726669,+ | |||
|id=chr7:142726662..142726669,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.69e-11!9;CL:0002251!1.69e-11!9;CL:0000239!3.28e-08!6;CL:0000677!3.28e-08!6;CL:0000212!3.28e-08!6;CL:0000584!3.28e-08!6;CL:0000075!7.20e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.55e-14,9;CL:0002251,1.55e-14,9;CL:0002250,2.29e-08,3;CL:0002076,2.52e-08,15;CL:0000239,3.72e-08,6;CL:0000677,3.72e-08,6;CL:0000584,3.72e-08,6;CL:0000066,1.76e-07,25;CL:0000075,5.53e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.77e-28!43;UBERON:0005409!1.73e-25!59;UBERON:0000344!6.27e-19!15;UBERON:0001242!1.27e-16!13;UBERON:0000060!1.27e-16!13;UBERON:0001262!1.27e-16!13;UBERON:0004786!1.27e-16!13;UBERON:0004923!5.63e-16!24;UBERON:0003350!1.69e-11!9;UBERON:0004808!1.69e-11!9;UBERON:0001277!1.69e-11!9;UBERON:0000485!5.69e-09!11;UBERON:0004119!1.01e-08!130;UBERON:0000925!1.01e-08!130;UBERON:0006595!1.01e-08!130;UBERON:0001007!1.83e-08!128;UBERON:0001555!1.83e-08!128;UBERON:0007026!1.83e-08!128;UBERON:0004921!2.20e-07!126;UBERON:0004185!2.20e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.74e-57,31;UBERON:0005409,1.50e-38,47;UBERON:0000344,2.34e-29,15;UBERON:0001242,1.17e-24,13;UBERON:0001262,1.17e-24,13;UBERON:0004786,1.17e-24,13;UBERON:0004923,4.50e-20,24;UBERON:0001007,8.90e-15,116;UBERON:0001555,8.90e-15,116;UBERON:0007026,8.90e-15,116;UBERON:0003350,1.55e-14,9;UBERON:0004808,1.55e-14,9;UBERON:0001277,1.55e-14,9;UBERON:0004119,2.00e-14,118;UBERON:0000925,2.00e-14,118;UBERON:0006595,2.00e-14,118;UBERON:0004921,1.35e-12,114;UBERON:0002108,5.45e-12,4;UBERON:0000485,1.03e-11,11;UBERON:0000331,3.16e-09,3;UBERON:0002116,3.16e-09,3;UBERON:0001204,3.16e-09,3;UBERON:0001168,3.16e-09,3 | |||
|phase1_expression=0,4.53668029931169,4.09499315450582,7.25914107136392,12.5223932486587,0.671517087647559,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87986361028132,2.75291137280604,5.16808767703518,0.86152399231815,1.29282739611533,6.65081968097309,5.29263272495855,2.66076612786366,0,0,0,2.02196133825892,2.99222361645286,2.6542016314108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7127581957859,0,0,0,0,0,0,0,0.125666591329675,2.47194967734374,0,0,0,0,0,1.86391761218122,0,0,5.62005521458901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.58214470653014,3.70230793328962,0.639864751605702,0.464473343720877,1.80414445850931,3.83198696784351,5.11469500843202,4.56541502670142,5.69434873853414,4.94096864172033,1.50801125280162,2.38747766449381,0.974820435595601,4.49409704327111,6.70027954611552,7.16908583715722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0.16488625294148,0,0.0603129249281559,0,0,6.70405924248657,0,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.436725127492355,0,0,0.26175594198403,2.33306951925227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0.64183841918363,0,0.760437899670719,0.188626341386076,0.187283014939765,0.128050304809739,0.34461281373368,0,0.231768651889711,0.192909220463705,0.412085900803307,0.147198920134397,0,0,0,0.436039249896986,0.282328141245992,0.25384382367503,0.548783918618318,0.789209134313529,0.814824683075171,0,0.474540072496697,0.29551344712669,0.818462086339379,0.154936841185966,0.385813221962283,0,0.233931608445408,0.214871054048298,0,0,0 | |phase1_expression=0,4.53668029931169,4.09499315450582,7.25914107136392,12.5223932486587,0.671517087647559,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87986361028132,2.75291137280604,5.16808767703518,0.86152399231815,1.29282739611533,6.65081968097309,5.29263272495855,2.66076612786366,0,0,0,2.02196133825892,2.99222361645286,2.6542016314108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7127581957859,0,0,0,0,0,0,0,0.125666591329675,2.47194967734374,0,0,0,0,0,1.86391761218122,0,0,5.62005521458901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.58214470653014,3.70230793328962,0.639864751605702,0.464473343720877,1.80414445850931,3.83198696784351,5.11469500843202,4.56541502670142,5.69434873853414,4.94096864172033,1.50801125280162,2.38747766449381,0.974820435595601,4.49409704327111,6.70027954611552,7.16908583715722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0.16488625294148,0,0.0603129249281559,0,0,6.70405924248657,0,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.436725127492355,0,0,0.26175594198403,2.33306951925227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0.64183841918363,0,0.760437899670719,0.188626341386076,0.187283014939765,0.128050304809739,0.34461281373368,0,0.231768651889711,0.192909220463705,0.412085900803307,0.147198920134397,0,0,0,0.436039249896986,0.282328141245992,0.25384382367503,0.548783918618318,0.789209134313529,0.814824683075171,0,0.474540072496697,0.29551344712669,0.818462086339379,0.154936841185966,0.385813221962283,0,0.233931608445408,0.214871054048298,0,0,0 | ||
|short_description=p@chr7:142726662..142726669,+ | |||
}} | }} |
Latest revision as of 10:14, 4 August 2015
Short description: | p@chr7:142726662..142726669, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:142726662..142726669, + |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.55e-14 | 9 |
epithelial cell of alimentary canal | 1.55e-14 | 9 |
intestinal crypt stem cell | 2.29e-08 | 3 |
endo-epithelial cell | 2.52e-08 | 15 |
brush border epithelial cell | 3.72e-08 | 6 |
gut absorptive cell | 3.72e-08 | 6 |
enterocyte | 3.72e-08 | 6 |
epithelial cell | 1.76e-07 | 25 |
columnar/cuboidal epithelial cell | 5.53e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 8.74e-57 | 31 |
gastrointestinal system | 1.50e-38 | 47 |
mucosa | 2.34e-29 | 15 |
intestinal mucosa | 1.17e-24 | 13 |
wall of intestine | 1.17e-24 | 13 |
gastrointestinal system mucosa | 1.17e-24 | 13 |
organ component layer | 4.50e-20 | 24 |
digestive system | 8.90e-15 | 116 |
digestive tract | 8.90e-15 | 116 |
primitive gut | 8.90e-15 | 116 |
epithelium of mucosa | 1.55e-14 | 9 |
gastrointestinal system epithelium | 1.55e-14 | 9 |
intestinal epithelium | 1.55e-14 | 9 |
endoderm-derived structure | 2.00e-14 | 118 |
endoderm | 2.00e-14 | 118 |
presumptive endoderm | 2.00e-14 | 118 |
subdivision of digestive tract | 1.35e-12 | 114 |
small intestine | 5.45e-12 | 4 |
simple columnar epithelium | 1.03e-11 | 11 |
ileal mucosa | 3.16e-09 | 3 |
ileum | 3.16e-09 | 3 |
mucosa of small intestine | 3.16e-09 | 3 |
wall of small intestine | 3.16e-09 | 3 |