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FFCP PHASE1:Mm9::chr9:107490197..107490220,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr9:107490197..107490220,+
|DHSsupport=NA
|short_description=p3@Ifrd2
|DPIdataset=NA
|description=CAGE_peak_3_at_Ifrd2_5end
|association_with_transcript=148bp_to_ENSMUST00000010192,NM_025903,uc009rmd.1_5end
|EntrezGene=15983
|EntrezGene=15983
|HGNC=
|HGNC=
|MCL_coexpression_id=8
|TSSclassifier=NA
|UniProt=Q9D8U0
|UniProt=Q9D8U0
|association_with_transcript=148bp_to_ENSMUST00000010192,NM_025903,uc009rmd.1_5end
|cluster_id=chr9:107490197..107490220,+
|description=CAGE_peak_3_at_Ifrd2_5end
|id=chr9:107490197..107490220,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0009854!2.74e-15!23;UBERON:0009856!2.74e-15!23;UBERON:0002107!1.17e-14!22;UBERON:0007499!1.17e-14!22;UBERON:0006925!1.17e-14!22;UBERON:0009497!1.17e-14!22;UBERON:0000015!1.17e-14!22;UBERON:0002423!1.17e-14!22;UBERON:0006235!1.17e-14!22;UBERON:0008835!1.17e-14!22;UBERON:0003894!1.17e-14!22;UBERON:0004161!1.17e-14!22;UBERON:0008836!1.17e-14!22;UBERON:0002365!1.04e-12!25;UBERON:0002330!1.04e-12!25;UBERON:0000160!1.87e-12!43;UBERON:0001007!1.59e-11!128;UBERON:0001555!1.59e-11!128;UBERON:0007026!1.59e-11!128;UBERON:0005409!2.92e-11!59;UBERON:0004921!8.51e-11!126;UBERON:0004185!8.51e-11!126;UBERON:0004119!1.04e-10!130;UBERON:0000925!1.04e-10!130;UBERON:0006595!1.04e-10!130;UBERON:0005172!1.64e-10!49;UBERON:0005173!1.64e-10!49;UBERON:0002417!1.64e-10!49;UBERON:0000916!1.64e-10!49;UBERON:0005177!3.87e-08!85;UBERON:0000949!1.85e-07!72;UBERON:0002108!2.63e-07!16;UBERON:0000466!3.29e-07!79;UBERON:0003914!3.86e-07!47;UBERON:0001045!4.25e-07!13;UBERON:0003929!5.94e-07!55
|ontology_enrichment_uberon_v019_2=UBERON:0009854,7.24e-24,23;UBERON:0009856,7.24e-24,23;UBERON:0002107,7.67e-23,22;UBERON:0007499,7.67e-23,22;UBERON:0006925,7.67e-23,22;UBERON:0009497,7.67e-23,22;UBERON:0000015,7.67e-23,22;UBERON:0002423,7.67e-23,22;UBERON:0006235,7.67e-23,22;UBERON:0008835,7.67e-23,22;UBERON:0003894,7.67e-23,22;UBERON:0004161,7.67e-23,22;UBERON:0008836,7.67e-23,22;UBERON:0002365,4.68e-19,25;UBERON:0002330,4.68e-19,25;UBERON:0003929,4.94e-12,55;UBERON:0000949,4.59e-11,72;UBERON:0005177,7.19e-09,79;UBERON:0003914,8.20e-09,47;UBERON:0005172,9.93e-09,49;UBERON:0005173,9.93e-09,49;UBERON:0002417,9.93e-09,49;UBERON:0000916,9.93e-09,49;UBERON:0005256,1.31e-08,45;UBERON:0001264,2.23e-08,12;UBERON:0000490,2.38e-08,66;UBERON:0005911,1.42e-07,69;UBERON:0001007,2.97e-07,116;UBERON:0001555,2.97e-07,116;UBERON:0007026,2.97e-07,116;UBERON:0004119,6.46e-07,118;UBERON:0000925,6.46e-07,118;UBERON:0006595,6.46e-07,118
|phase1_expression=0,1.39590163055744,0.909998478779072,0.60492842261366,1.50268718983904,2.01455126294268,3.27057696833736,0,2.53419699873,1.40438715793196,0.34243593645101,0.319088635981346,0,0.0874204024189974,0.999329285446988,1.01237633694913,0.699561878128147,0,0.137114433605739,0,0.17008658030214,0,0,1.43993180514066,1.83527424853736,1.14846392823004,0.86152399231815,2.80112602491656,1.14014051673824,0.756090389279792,1.10865255327652,1.90509202037889,4.30545351309199,0,2.59966457776147,3.32469290716985,2.85837098767317,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0.439372365468944,0.777719596297134,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0,0.210324961351382,0,0,0,0,0,0,0,0,0,0.182975287204819,0,0.279182999001381,0,0,0,0,0.186399445825301,0.227178579999552,0.302286240427142,2.31891590961342,9.46466264679525,1.3599426674155,3.77792234146472,7.79731700937203,4.92829575807069,1.26399978118577,0,0.259786004602869,0.70667914902068,0,0,0,0,0.432982082022428,0.253359865475099,0.505524445014783,1.25602267690966,0,0.29688427812965,1.21439728736295,0.913396434936424,1.38369298353635,0.60289056221049,0.705532242814229,0.879666139307728,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0,3.72783522436244,0,0.209446706813455,0.766371165625774,0.11981512450592,1.19980546198682,0.127070227073065,0,0,0.125654352112864,0,0.255715457330331,0,0,0.305518091550949,0.248813941220186,0.252722758433675,0,0.650602214813519,0.689706313300419,0,0.60281927134286,0.204109497453984,0.12811372028485,0.187403449119458,0,0.646703978798527,0.378212160335639,0.351902248327898,0.43839146485515,0.556094498451196,0.348252166522167,0.205782136407943,0,0,0,0.284163499395593,0.414251545071004,0.234526059981096,0.900310307305074,0.23674473558521,0.787056926989615,0.154267112887378,0.465067889500816,2.41446061259657,0.817357396570186,1.15191894939436,0,0.243206428637567,0.146199987425332,1.3173006917463,0.805238512562231,0,0.102904612379284,0.330418782983798,3.43785736662608,0,0.464473343720877,0.515469845288373,1.4117846723634,1.11189021922435,1.33157938278791,1.89811624617805,0.164698954724011,1.00534083520108,0.198956472041151,0.38992817423824,2.69645822596266,1.08069024937347,0.995706366271836,0.569003702859245,0.685491075658373,0,0.203651327845314,0.193952487167626,0.350679099451593,0.442655759869801,0.442830443938806,0.784993639206874,0.616985819609003,10.6722945751374,1.66845105716094,1.57247196090562,3.14806957338795,2.63718157805054,4.3411888755435,8.14802725700543,12.083237772934,7.13394997810156,9.60964946158285,1.43768206527355,6.32639611036456,7.17686648163489,10.6083128737787,9.68746033018326,14.9557491622644,0.184753190166605,0.37898282354097,0.325929952884052,0.339490171550376,0,0.335012514883631,0,0.195133647857799,0,0,0,0.327726629431476,0.172684981865896,0,0,0,0.491764273019036,0.275936746304732,0,0,0.163934945376675,1.00988370881749,0,0.780877488593277,0,0.477937595905104,0,0,0,0.292255857911312,0.395287777946524,0.321321316421807,0.283880170416537,0.35613120733451,0.162886959353576,0.164970122972535,3.98235415019888,1.69946445308487,2.11626489875326,3.20628635585027,2.65771703592696,2.15204603560749,1.55056975900933,1.09060118843252,2.13898427030833,0.948110273807448,4.21674434299995,1.03135543248187,0,0.36012218806262,0.388076051348264,0.214337035031592,0.177340233642274,0,0.164549020602121,0,0,0,0.220528398054962,0.16488625294148,0.161464426695906,0.180938774784468,0,0.164140899745061,1.45740418314925,0,0.683483523191411,0.206386867963223,0,0.188368457004691,1.23024804948923,1.37266903923914,0,0.139951452323658,0,0,0.316335993581135,0.203319467126849,0.432021363287205,0.836353184057875,0.655087691238533,0.809186078308924,0.909188012978695,0.523511883968059,0.259229946583586,0,0,0,0.165458490457098,0.388902376688095,0.516639293910924,0.168956125490778,0.234714477291508,0.781226309063701,0.209718688851422,0.483168241652012,0,0,0.405450430580328,0.205421914329655,0.389762468933385,0.358053391334963,0,0.120195449519969,0,0,0.15241361331,0,0,0,0,0.226730383615211,0.443971906748129,0.269141569828427,0.167884616364078,0.19318959403219,0.187682475451182,0.183151624267265,0,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0.518936737920883,0.399024873401031,0,1.21553358534147,1.25767897576789,1.2869045591501,1.77797382241292,1.44224540067226,1.28367683836726,1.76888048234658,1.01391719956096,1.32038438970253,1.03005658216871,1.60062881012173,1.49332219284595,1.42888107384922,1.97003354106254,0.192909220463705,2.47251540481984,1.03039244094078,0.685738504770831,0.887379030796687,1.1921809497366,1.45346416632329,1.2234219453993,0.761531471025089,1.64635175585495,2.10455769150274,1.49384525230448,1.68342681497322,1.66089025373844,1.28055827088233,1.22769312950907,2.78886314134739,0.578719832943424,0,1.40358965067245,0.859484216193193,0.382576664137687,0.220591419119515,0.695603506861264
|phase1_expression=0,1.39590163055744,0.909998478779072,0.60492842261366,1.50268718983904,2.01455126294268,3.27057696833736,0,2.53419699873,1.40438715793196,0.34243593645101,0.319088635981346,0,0.0874204024189974,0.999329285446988,1.01237633694913,0.699561878128147,0,0.137114433605739,0,0.17008658030214,0,0,1.43993180514066,1.83527424853736,1.14846392823004,0.86152399231815,2.80112602491656,1.14014051673824,0.756090389279792,1.10865255327652,1.90509202037889,4.30545351309199,0,2.59966457776147,3.32469290716985,2.85837098767317,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0.439372365468944,0.777719596297134,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0,0.210324961351382,0,0,0,0,0,0,0,0,0,0.182975287204819,0,0.279182999001381,0,0,0,0,0.186399445825301,0.227178579999552,0.302286240427142,2.31891590961342,9.46466264679525,1.3599426674155,3.77792234146472,7.79731700937203,4.92829575807069,1.26399978118577,0,0.259786004602869,0.70667914902068,0,0,0,0,0.432982082022428,0.253359865475099,0.505524445014783,1.25602267690966,0,0.29688427812965,1.21439728736295,0.913396434936424,1.38369298353635,0.60289056221049,0.705532242814229,0.879666139307728,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0,3.72783522436244,0,0.209446706813455,0.766371165625774,0.11981512450592,1.19980546198682,0.127070227073065,0,0,0.125654352112864,0,0.255715457330331,0,0,0.305518091550949,0.248813941220186,0.252722758433675,0,0.650602214813519,0.689706313300419,0,0.60281927134286,0.204109497453984,0.12811372028485,0.187403449119458,0,0.646703978798527,0.378212160335639,0.351902248327898,0.43839146485515,0.556094498451196,0.348252166522167,0.205782136407943,0,0,0,0.284163499395593,0.414251545071004,0.234526059981096,0.900310307305074,0.23674473558521,0.787056926989615,0.154267112887378,0.465067889500816,2.41446061259657,0.817357396570186,1.15191894939436,0,0.243206428637567,0.146199987425332,1.3173006917463,0.805238512562231,0,0.102904612379284,0.330418782983798,3.43785736662608,0,0.464473343720877,0.515469845288373,1.4117846723634,1.11189021922435,1.33157938278791,1.89811624617805,0.164698954724011,1.00534083520108,0.198956472041151,0.38992817423824,2.69645822596266,1.08069024937347,0.995706366271836,0.569003702859245,0.685491075658373,0,0.203651327845314,0.193952487167626,0.350679099451593,0.442655759869801,0.442830443938806,0.784993639206874,0.616985819609003,10.6722945751374,1.66845105716094,1.57247196090562,3.14806957338795,2.63718157805054,4.3411888755435,8.14802725700543,12.083237772934,7.13394997810156,9.60964946158285,1.43768206527355,6.32639611036456,7.17686648163489,10.6083128737787,9.68746033018326,14.9557491622644,0.184753190166605,0.37898282354097,0.325929952884052,0.339490171550376,0,0.335012514883631,0,0.195133647857799,0,0,0,0.327726629431476,0.172684981865896,0,0,0,0.491764273019036,0.275936746304732,0,0,0.163934945376675,1.00988370881749,0,0.780877488593277,0,0.477937595905104,0,0,0,0.292255857911312,0.395287777946524,0.321321316421807,0.283880170416537,0.35613120733451,0.162886959353576,0.164970122972535,3.98235415019888,1.69946445308487,2.11626489875326,3.20628635585027,2.65771703592696,2.15204603560749,1.55056975900933,1.09060118843252,2.13898427030833,0.948110273807448,4.21674434299995,1.03135543248187,0,0.36012218806262,0.388076051348264,0.214337035031592,0.177340233642274,0,0.164549020602121,0,0,0,0.220528398054962,0.16488625294148,0.161464426695906,0.180938774784468,0,0.164140899745061,1.45740418314925,0,0.683483523191411,0.206386867963223,0,0.188368457004691,1.23024804948923,1.37266903923914,0,0.139951452323658,0,0,0.316335993581135,0.203319467126849,0.432021363287205,0.836353184057875,0.655087691238533,0.809186078308924,0.909188012978695,0.523511883968059,0.259229946583586,0,0,0,0.165458490457098,0.388902376688095,0.516639293910924,0.168956125490778,0.234714477291508,0.781226309063701,0.209718688851422,0.483168241652012,0,0,0.405450430580328,0.205421914329655,0.389762468933385,0.358053391334963,0,0.120195449519969,0,0,0.15241361331,0,0,0,0,0.226730383615211,0.443971906748129,0.269141569828427,0.167884616364078,0.19318959403219,0.187682475451182,0.183151624267265,0,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0.518936737920883,0.399024873401031,0,1.21553358534147,1.25767897576789,1.2869045591501,1.77797382241292,1.44224540067226,1.28367683836726,1.76888048234658,1.01391719956096,1.32038438970253,1.03005658216871,1.60062881012173,1.49332219284595,1.42888107384922,1.97003354106254,0.192909220463705,2.47251540481984,1.03039244094078,0.685738504770831,0.887379030796687,1.1921809497366,1.45346416632329,1.2234219453993,0.761531471025089,1.64635175585495,2.10455769150274,1.49384525230448,1.68342681497322,1.66089025373844,1.28055827088233,1.22769312950907,2.78886314134739,0.578719832943424,0,1.40358965067245,0.859484216193193,0.382576664137687,0.220591419119515,0.695603506861264
|short_description=p3@Ifrd2
}}
}}

Latest revision as of 03:31, 26 September 2015

Short description:p3@Ifrd2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Ifrd2_5end
Coexpression cluster:MCL_coexpression_mm9:8
Association with transcript: 148bp_to_ENSMUST00000010192, NM_025903, uc009rmd.1_5end
EntrezGene:Ifrd2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Ifrd2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.27
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.53
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.32
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.84
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I22.80
Ileum epithelium, pool1.CNhs13199.10252-104B91.14
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.31
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.60
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.32
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.86
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F79.46
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.78
Mouse hepatocyte, donor6.CNhs13090.11822-124F47.80
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.93
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.26
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G32.41
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A33.44
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B210.67
liver, embryo E12.CNhs10601.355-15F81.67
liver, embryo E13.CNhs10524.378-3H61.57
liver, embryo E14.CNhs10594.409-16E13.15
liver, embryo E15.CNhs10520.433-16D72.64
liver, embryo E16.CNhs10523.462-17F54.34
liver, embryo E17.CNhs10510.481-18A38.15
liver, embryo E18.CNhs10579.499-43G412.08
liver, neonate N00.CNhs11117.641-24F47.13
liver, neonate N03.CNhs11123.1345-25G29.61
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H26.33
liver, neonate N10.CNhs11115.751-24B97.18
liver, neonate N20.CNhs11220.823-25A310.61
liver, neonate N25.CNhs11198.1368-26H19.69
liver, neonate N30.CNhs11106.1382-42D114.96
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E53.21
pancreas, embryo E17.CNhs10599.1558-45G32.66
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H11.23
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.79
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
digestive tract diverticulum7.24e-2423
sac7.24e-2423
liver7.67e-2322
epithelial sac7.67e-2322
digestive gland7.67e-2322
epithelium of foregut-midgut junction7.67e-2322
anatomical boundary7.67e-2322
hepatobiliary system7.67e-2322
foregut-midgut junction7.67e-2322
hepatic diverticulum7.67e-2322
liver primordium7.67e-2322
septum transversum7.67e-2322
liver bud7.67e-2322
exocrine gland4.68e-1925
exocrine system4.68e-1925
gut epithelium4.94e-1255
endocrine system4.59e-1172
trunk region element7.19e-0979
epithelial tube8.20e-0947
abdomen element9.93e-0949
abdominal segment element9.93e-0949
abdominal segment of trunk9.93e-0949
abdomen9.93e-0949
trunk mesenchyme1.31e-0845
pancreas2.23e-0812
unilaminar epithelium2.38e-0866
endo-epithelium1.42e-0769
digestive system2.97e-07116
digestive tract2.97e-07116
primitive gut2.97e-07116
endoderm-derived structure6.46e-07118
endoderm6.46e-07118
presumptive endoderm6.46e-07118
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